Tunca Dogan

Orcid: 0000-0002-1298-9763

According to our database1, Tunca Dogan authored at least 19 papers between 2015 and 2024.

Collaborative distances:
  • Dijkstra number2 of four.
  • Erdős number3 of four.

Timeline

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Bibliography

2024
An integrative framework for clinical diagnosis and knowledge discovery from exome sequencing data.
Comput. Biol. Medicine, February, 2024

2023
How to approach machine learning-based prediction of drug/compound-target interactions.
J. Cheminformatics, December, 2023

ProFAB - open protein functional annotation benchmark.
Briefings Bioinform., March, 2023

Annotation of biologically relevant ligands in UniProtKB using ChEBI.
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Bioinform., January, 2023

SELFormer: Molecular Representation Learning via SELFIES Language Models.
CoRR, 2023

Target Specific De Novo Design of Drug Candidate Molecules with Graph Transformer-based Generative Adversarial Networks.
CoRR, 2023

Transfer learning for drug-target interaction prediction.
Bioinform., 2023

2022
Learning functional properties of proteins with language models.
Nat. Mach. Intell., 2022

SLPred: a multi-view subcellular localization prediction tool for multi-location human proteins.
Bioinform., 2022

2021
Protein domain-based prediction of drug/compound-target interactions and experimental validation on LIM kinases.
PLoS Comput. Biol., 2021

UniProt: the universal protein knowledgebase in 2021.
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Nucleic Acids Res., 2021

MDeePred: novel multi-channel protein featurization for deep learning-based binding affinity prediction in drug discovery.
Bioinform., 2021

2020
iBioProVis: interactive visualization and analysis of compound bioactivity space.
Bioinform., 2020

iBioProVis: interactive visualization and analysis of compound bioactivity space.
Bioinform., 2020

2019
Recent applications of deep learning and machine intelligence on in silico drug discovery: methods, tools and databases.
Briefings Bioinform., 2019

2018
ECPred: a tool for the prediction of the enzymatic functions of protein sequences based on the EC nomenclature.
BMC Bioinform., 2018

2016
Tools and data services registry: a community effort to document bioinformatics resources.
Nucleic Acids Res., 2016

UniProt-DAAC: domain architecture alignment and classification, a new method for automatic functional annotation in UniProtKB.
Bioinform., 2016

2015
Unsupervised identification of redundant domain entries in InterPro database using clustering techniques.
Proceedings of the 6th ACM Conference on Bioinformatics, 2015


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