Paolo Ribeca

According to our database, Paolo Ribeca authored at least 14 papers between 2008 and 2024.

Collaborative distances:

• Dijkstra number of five.
• Erdős number of three.

2024

Efficient Neural Clustering and Compression of Strings Through Approximate Euclidean Embeddings of the Levenshtein Distance.

Ünsal Öztürk, Utku Görkem Ertürk, Simone Casale-Brunet, Paolo Ribeca, Marco Mattavelli

Proceedings of the Data Compression Conference, 2024

2023

Distinguishing imported cases from locally acquired cases within a geographically limited genomic sample of an infectious disease.

Xavier Didelot, David Helekal, Michelle Kendall, Paolo Ribeca

Bioinform., January, 2023

Scaling a Variant Calling Genomics Pipeline with FaaS.

Aitor Arjona, Arnau Gabriel-Atienza, Sara Lanuza-Orna, Xavier Roca-Canals, Ayman Bourramouss, Tyler K. Chafin, Lucio Marcello, Paolo Ribeca, Pedro García López

Proceedings of the 9th International Workshop on Serverless Computing, 2023

FM-Directories: Extending the Burrows-Wheeler Transform for String Labeled Vertex Graphs of (Almost) Arbitrary Topology.

Unsal Ozturk, Paolo Ribeca, Marco Mattavelli

Proceedings of the Data Compression Conference, 2023

2022

MPEG-G Reference-Based Compression of Unaligned Reads Through Ultra-Fast Alignments.

Unsal Ozturk, Simone Casale-Brunet, Paolo Ribeca, Marco Mattavelli

Proceedings of the Data Compression Conference, 2022

A Benchmark of Entropy Coders for the Compression of Genome Sequencing Data.

Simone Casale-Brunet, Paolo Ribeca, Claudio Alberti, Unsal Ozturk, Marco Mattavelli

Proceedings of the Data Compression Conference, 2022

2021

Networks of Ethereum Non-Fungible Tokens: A graph-based analysis of the ERC-721 ecosystem.

Simone Casale-Brunet, Paolo Ribeca, P. Doyle, Marco Mattavelli

Proceedings of the 2021 IEEE International Conference on Blockchain, 2021

2015

Boosting the FM-Index on the GPU: Effective Techniques to Mitigate Random Memory Access.

Alejandro Chacón, Santiago Marco-Sola, Antonio Espinosa, Paolo Ribeca, Juan Carlos Moure

IEEE ACM Trans. Comput. Biol. Bioinform., 2015

CARGO: Effective format-free compressed storage of genomic information.

Lukasz Roguski, Paolo Ribeca

CoRR, 2015

2014

FM-Index on GPU: A Cooperative Scheme to Reduce Memory Footprint.

Alejandro Chacón, Santiago Marco-Sola, Antonio Espinosa, Paolo Ribeca, Juan Carlos Moure

Proceedings of the IEEE International Symposium on Parallel and Distributed Processing with Applications, 2014

Thread-cooperative, bit-parallel computation of levenshtein distance on GPU.

Alejandro Chacón, Santiago Marco-Sola, Antonio Espinosa, Paolo Ribeca, Juan Carlos Moure

Proceedings of the 2014 International Conference on Supercomputing, 2014

2011

Computational challenges of sequence classification in microbiomic data.

Paolo Ribeca, Gabriel Valiente

Briefings Bioinform., 2011

2010

A more precise characterization of chaperonin substrates.

Emanuele Raineri, Paolo Ribeca, Luis Serrano, Tobias Maier

Bioinform., 2010

2008

Faster exact Markovian probability functions for motif occurrences: a DFA-only approach.

Paolo Ribeca, Emanuele Raineri

Bioinform., 2008