Stephen R. Holbrook

According to our database, Stephen R. Holbrook authored at least 13 papers between 1993 and 2007.

Collaborative distances:

• Dijkstra number of four.
• Erdős number of four.

2007

Terminator Detection by Support Vector Machine Utilizing a Stochastic Context-Free Grammar.

Patricia Francis-Lyon, Nello Cristianini, Stephen R. Holbrook

Proceedings of the 2007 IEEE Symposium on Computational Intelligence in Bioinformatics and Computational Biology, 2007

2006

MeRNA: a database of metal ion binding sites in RNA structures.

Liliana R. Stefan, Rui Zhang, Aaron G. Levitan, Donna K. Hendrix, Steven E. Brenner, Stephen R. Holbrook

Nucleic Acids Res., 2006

Transitive closure and metric inequality of weighted graphs: detecting protein interaction modules using cliques.

Chris H. Q. Ding, Xiaofeng He, Hui Xiong, Hanchuan Peng, Stephen R. Holbrook

Int. J. Data Min. Bioinform., 2006

PSoL: a positive sample only learning algorithm for finding non-coding RNA genes.

Chunlin Wang, Chris H. Q. Ding, Richard F. Meraz, Stephen R. Holbrook

Bioinform., 2006

Biclustering Protein Complex Interactions with a Biclique Finding Algorithm.

Chris H. Q. Ding, Ya Zhang, Tao Li, Stephen R. Holbrook

Proceedings of the 6th IEEE International Conference on Data Mining (ICDM 2006), 2006

2005

Comparative mapping of sequence-based and structure-based protein domains.

Ya Zhang, John-Marc Chandonia, Chris H. Q. Ding, Stephen R. Holbrook

BMC Bioinform., 2005

Identification of Functional Modules in Protein Complexes via Hyperclique Pattern Discovery.

Hui Xiong, Xiaofeng He, Chris H. Q. Ding, Ya Zhang, Vipin Kumar, Stephen R. Holbrook

Proceedings of the Biocomputing 2005, 2005

Classification of Non-Coding RNA Using Graph Representations of Secondary Structure.

Yan Karklin, Richard F. Meraz, Stephen R. Holbrook

Proceedings of the Biocomputing 2005, 2005

2004

SCOR: Structural Classification of RNA, version 2.0.

Makio Tamura, Donna K. Hendrix, Peter S. Klosterman, Nancy R. B. Schimmelman, Steven E. Brenner, Stephen R. Holbrook

Nucleic Acids Res., 2004

Positive Sample Only Learning (PSOL) for Predicting RNA Genes in E. coli.

Richard F. Meraz, Xiaofeng He, Chris H. Q. Ding, Stephen R. Holbrook

Proceedings of the 3rd International IEEE Computer Society Computational Systems Bioinformatics Conference, 2004

Contraction Graphs for Representation and Analysis of RNA Secondary Structure.

Chris H. Q. Ding, Richard F. Meraz, Xiaofeng He, Stephen R. Holbrook

Proceedings of the 3rd International IEEE Computer Society Computational Systems Bioinformatics Conference, 2004

2002

SCOR: a Structural Classification of RNA database.

Peter S. Klosterman, Makio Tamura, Stephen R. Holbrook, Steven E. Brenner

Nucleic Acids Res., 2002

1993

Comparison of Two Variations of Neural Network Approaches to the Prediction of Protein Folding Pattern.

Inna Dubchak, Stephen R. Holbrook, Sung-Hou Kim

Proceedings of the 1st International Conference on Intelligent Systems for Molecular Biology, 1993