Jurgen Fripp

Orcid: 0000-0001-9705-0079

Affiliations:
  • University of Queensland, Saint Lucia, Australia


According to our database1, Jurgen Fripp authored at least 129 papers between 2005 and 2024.

Collaborative distances:
  • Dijkstra number2 of four.
  • Erdős number3 of four.

Timeline

Legend:

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PhD thesis 
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Bibliography

2024
Accuracy of TrUE-Net in comparison to established white matter hyperintensity segmentation methods: An independent validation study.
NeuroImage, January, 2024

Automated anomaly-aware 3D segmentation of bones and cartilages in knee MR images from the Osteoarthritis Initiative.
Medical Image Anal., 2024

2023
Disease progression modelling of Alzheimer's disease using probabilistic principal components analysis.
NeuroImage, September, 2023

Functional re-organization of hippocampal-cortical gradients during naturalistic memory processes.
NeuroImage, May, 2023

Early brain morphometrics from neonatal MRI predict motor and cognitive outcomes at 2-years corrected age in very preterm infants.
NeuroImage, 2023

Gene-SGAN: a method for discovering disease subtypes with imaging and genetic signatures via multi-view weakly-supervised deep clustering.
CoRR, 2023

DBCE : A Saliency Method for Medical Deep Learning Through Anatomically-Consistent Free-Form Deformations.
Proceedings of the IEEE/CVF Winter Conference on Applications of Computer Vision, 2023

Semantic Segmentation of 3D Medical Images Through a Kaleidoscope: Data from the Osteoarthritis Initiative.
Proceedings of the Medical Imaging with Deep Learning, 2023

An Informatics Platform for the Management of Data for Australian Dementia Network (ADNeT) Initiative.
Proceedings of the MEDINFO 2023 - The Future Is Accessible, 2023

When to Use Augmentation - Variability Insufficient for Cortical Thickness Estimation Improvement.
Proceedings of the 20th IEEE International Symposium on Biomedical Imaging, 2023

Medical Shape Pattern Analysis with MeshCNN.
Proceedings of the 20th IEEE International Symposium on Biomedical Imaging, 2023

Generalization Properties of Geometric 3D Deep Learning Models for Medical Segmentation.
Proceedings of the 20th IEEE International Symposium on Biomedical Imaging, 2023

2022
β-amyloid PET harmonisation across longitudinal studies: Application to AIBL, ADNI and OASIS3.
NeuroImage, 2022

Quantifiable brain atrophy synthesis for benchmarking of cortical thickness estimation methods.
Medical Image Anal., 2022

Open-Source Hypothalamic-ForniX (OSHy-X) Atlases and Segmentation Tool for 3T and 7T.
J. Open Source Softw., 2022

CorticalFlow: A Diffeomorphic Mesh Deformation Module for Cortical Surface Reconstruction.
CoRR, 2022

Anomaly-Aware 3D Segmentation of Knee Magnetic Resonance Images.
Proceedings of the International Conference on Medical Imaging with Deep Learning, 2022

Lesser of Two Evils Improves Learning in the Context of Cortical Thickness Estimation Models - Choose Wisely.
Proceedings of the Data Augmentation, Labelling, and Imperfections, 2022

CorticalFlow<sup>++</sup>: Boosting Cortical Surface Reconstruction Accuracy, Regularity, and Interoperability.
Proceedings of the Medical Image Computing and Computer Assisted Intervention - MICCAI 2022, 2022

Trans-ResNet: Integrating Transformers and CNNs for Alzheimer's disease classification.
Proceedings of the 19th IEEE International Symposium on Biomedical Imaging, 2022

2021
SA-LuT-Nets: Learning Sample-Adaptive Intensity Lookup Tables for Brain Tumor Segmentation.
IEEE Trans. Medical Imaging, 2021

Non-negative matrix factorisation improves Centiloid robustness in longitudinal studies.
NeuroImage, 2021

DeepCSR: A 3D Deep Learning Approach for Cortical Surface Reconstruction.
Proceedings of the IEEE Winter Conference on Applications of Computer Vision, 2021

CorticalFlow: A Diffeomorphic Mesh Transformer Network for Cortical Surface Reconstruction.
Proceedings of the Advances in Neural Information Processing Systems 34: Annual Conference on Neural Information Processing Systems 2021, 2021

Detail Matters: High-Frequency Content for Realistic Synthetic MRI Generation.
Proceedings of the Simulation and Synthesis in Medical Imaging, 2021

Smocam: Smooth Conditional Attention Mask For 3d-Regression Models.
Proceedings of the 18th IEEE International Symposium on Biomedical Imaging, 2021

Going Deeper With Brain Morphometry Using Neural Networks.
Proceedings of the 18th IEEE International Symposium on Biomedical Imaging, 2021

Towards a generalization of the MP2RAGE partial volume estimation model to account for B1<sup>+</sup> inhomogeneities at 7T.
Proceedings of the 18th IEEE International Symposium on Biomedical Imaging, 2021

2020
Sample-Adaptive GANs: Linking Global and Local Mappings for Cross-Modality MR Image Synthesis.
IEEE Trans. Medical Imaging, 2020

Predicting motor outcome in preterm infants from very early brain diffusion MRI using a deep learning convolutional neural network (CNN) model.
NeuroImage, 2020

Harmonization of large MRI datasets for the analysis of brain imaging patterns throughout the lifespan.
NeuroImage, 2020

Brain microstructure and morphology of very preterm-born infants at term equivalent age: Associations with motor and cognitive outcomes at 1 and 2 years.
NeuroImage, 2020

Medical Image Harmonization Using Deep Learning Based Canonical Mapping: Toward Robust and Generalizable Learning in Imaging.
CoRR, 2020

Fabric Image Representation Encoding Networks for Large-scale 3D Medical Image Analysis.
CoRR, 2020

Learning Sample-Adaptive Intensity Lookup Table for Brain Tumor Segmentation.
Proceedings of the Medical Image Computing and Computer Assisted Intervention - MICCAI 2020, 2020

3D Brain MRI GAN-Based Synthesis Conditioned on Partial Volume Maps.
Proceedings of the Simulation and Synthesis in Medical Imaging, 2020

Fast High Dynamic Range MRI by Contrast Enhancement Networks.
Proceedings of the 17th IEEE International Symposium on Biomedical Imaging, 2020

2019
Ea-GANs: Edge-Aware Generative Adversarial Networks for Cross-Modality MR Image Synthesis.
IEEE Trans. Medical Imaging, 2019

Non-linear realignment improves hippocampus subfield segmentation reliability.
NeuroImage, 2019

Quantifying deep grey matter atrophy using automated segmentation approaches: A systematic review of structural MRI studies.
NeuroImage, 2019

Identification of Functional Connectivity Features in Depression Subtypes Using a Data-Driven Approach.
Proceedings of the Graph Learning in Medical Imaging - First International Workshop, 2019

High Contrast T1-Weigthed Mri with Fluid and White Matter Suppression Using Mp2Rage.
Proceedings of the 16th IEEE International Symposium on Biomedical Imaging, 2019

2018
Implementing the centiloid transformation for <sup>11</sup>C-PiB and β-amyloid <sup>18</sup>F-PET tracers using CapAIBL.
NeuroImage, 2018

A lightweight rapid application development framework for biomedical image analysis.
Comput. Methods Programs Biomed., 2018

MRI white matter lesion segmentation using an ensemble of neural networks and overcomplete patch-based voting.
Comput. Medical Imaging Graph., 2018

Investigating Brain Age Deviation in Preterm Infants: A Deep Learning Approach.
Proceedings of the Data Driven Treatment Response Assessment - and - Preterm, Perinatal, and Paediatric Image Analysis, 2018

MRI Denoising and Artefact Removal Using Self-Organizing Maps for Fast Global Block-Matching.
Proceedings of the Patch-Based Techniques in Medical Imaging, 2018

Data Augmentation Using Synthetic Lesions Improves Machine Learning Detection of Microbleeds from MRI.
Proceedings of the Simulation and Synthesis in Medical Imaging, 2018

A Framework to Objectively Identify Reference Regions for Normalizing Quantitative Imaging.
Proceedings of the Medical Image Computing and Computer Assisted Intervention - MICCAI 2018, 2018

3D cGAN based cross-modality MR image synthesis for brain tumor segmentation.
Proceedings of the 15th IEEE International Symposium on Biomedical Imaging, 2018

2017
Evaluation and comparison of 3D intervertebral disc localization and segmentation methods for 3D T2 MR data: A grand challenge.
Medical Image Anal., 2017

Automated cartilage segmentation from 3D MR images of hip joint using an ensemble of neural networks.
Proceedings of the 14th IEEE International Symposium on Biomedical Imaging, 2017

A spatio-temporal atlas of neonatal diffusion MRI based on kernel ridge regression.
Proceedings of the 14th IEEE International Symposium on Biomedical Imaging, 2017

A normalisation framework for quantitative brain imaging; application to quantitative susceptibility mapping.
Proceedings of the 14th IEEE International Symposium on Biomedical Imaging, 2017

PET-only 18F-AV1451 tau quantification.
Proceedings of the 14th IEEE International Symposium on Biomedical Imaging, 2017

2016
Statistical machine learning to identify traumatic brain injury (TBI) from structural disconnections of white matter networks.
NeuroImage, 2016

HIST: HyperIntensity Segmentation Tool.
Proceedings of the Patch-Based Techniques in Medical Imaging, 2016

CapAIBL: Automated Reporting of Cortical PET Quantification Without Need of MRI on Brain Surface Using a Patch-Based Method.
Proceedings of the Patch-Based Techniques in Medical Imaging, 2016

Automated segmentation and T2-mapping of the posterior cruciate ligament from MRI of the knee: Data from the osteoarthritis initiative.
Proceedings of the 13th IEEE International Symposium on Biomedical Imaging, 2016

Incremental shape learning of 3D surfaces of the knee, data from the osteoarthritis initiative.
Proceedings of the 13th IEEE International Symposium on Biomedical Imaging, 2016

Anatomical hubs from spectral clustering of structural connectomes.
Proceedings of the 13th IEEE International Symposium on Biomedical Imaging, 2016

3D Scanning System for Automatic High-Resolution Plant Phenotyping.
Proceedings of the 2016 International Conference on Digital Image Computing: Techniques and Applications, 2016

Automated Plant and Leaf Separation: Application in 3D Meshes of Wheat Plants.
Proceedings of the 2016 International Conference on Digital Image Computing: Techniques and Applications, 2016

Maximum Pseudolikelihood Estimation for Mixture-Markov Random Field Segmentation of the Brain.
Proceedings of the 2016 International Conference on Digital Image Computing: Techniques and Applications, 2016

2015
On the Use of Coupled Shape Priors for Segmentation of Magnetic Resonance Images of the Knee.
IEEE J. Biomed. Health Informatics, 2015

Assessing atrophy measurement techniques in dementia: Results from the MIRIAD atrophy challenge.
NeuroImage, 2015

Robust inverse-consistent affine CT-MR registration in MRI-assisted and MRI-alone prostate radiation therapy.
Medical Image Anal., 2015

Statistical shape model reconstruction with sparse anomalous deformations: Application to intervertebral disc herniation.
Comput. Medical Imaging Graph., 2015

Heritability analysis of surface-based cortical thickness estimation on a large twin cohort.
Proceedings of the Medical Imaging 2015: Image Processing, 2015

Computational analysis of PET by AIBL (CapAIBL): a cloud-based processing pipeline for the quantification of PET images.
Proceedings of the Medical Imaging 2015: Image Processing, 2015

Automated Intervertebral Disc Segmentation Using Probabilistic Shape Estimation and Active Shape Models.
Proceedings of the Computational Methods and Clinical Applications for Spine Imaging, 2015

Uninformative Frame Detection in Colonoscopy Through Motion, Edge and Color Features.
Proceedings of the Computer-Assisted and Robotic Endoscopy - Second International Workshop, 2015

2014
Investigating brain connectivity heritability in a twin study using diffusion imaging data.
NeuroImage, 2014

Lesion segmentation from multimodal MRI using random forest following ischemic stroke.
NeuroImage, 2014

Focused shape models for hip joint segmentation in 3D magnetic resonance images.
Medical Image Anal., 2014

Fast Multiatlas Selection Using Composition of Transformations for Radiation Therapy Planning.
Proceedings of the Medical Computer Vision: Algorithms for Big Data, 2014

2013
Research and applications: Three-dimensional morphological and signal intensity features for detection of intervertebral disc degeneration from magnetic resonance images.
J. Am. Medical Informatics Assoc., 2013

Research and applications: MilxXplore: a web-based system to explore large imaging datasets.
J. Am. Medical Informatics Assoc., 2013

Structure-Guided Nonrigid Registration of CT-MR Pelvis Scans with Large Deformations in MR-Based Image Guided Radiation Therapy.
Proceedings of the Clinical Image-Based Procedures. Translational Research in Medical Imaging, 2013

Classification Forests and Markov Random Field to Segment Chronic Ischemic Infarcts from Multimodal MRI.
Proceedings of the Multimodal Brain Image Analysis - Third International Workshop, 2013

2012
Patient Specific Prostate Segmentation in 3-D Magnetic Resonance Images.
IEEE Trans. Medical Imaging, 2012

Detecting global and local hippocampal shape changes in Alzheimer's disease using statistical shape models.
NeuroImage, 2012

Constrained reverse diffusion for thick slice interpolation of 3D volumetric MRI images.
Comput. Medical Imaging Graph., 2012

Consistent estimation of shape parameters in statistical shape model by symmetric EM algorithm.
Proceedings of the Medical Imaging 2012: Image Processing, 2012

A surface based approach for cortical thickness comparison between PiB+ and PiB- healthy control subjects.
Proceedings of the Medical Imaging 2012: Image Processing, 2012

MR-Less Surface-Based Amyloid Estimation by Subject-Specific Atlas Selection and Bayesian Fusion.
Proceedings of the Medical Image Computing and Computer-Assisted Intervention - MICCAI 2012, 2012

Local vs Global Descriptors of Hippocampus Shape Evolution for Alzheimer's Longitudinal Population Analysis.
Proceedings of the Spatio-temporal Image Analysis for Longitudinal and Time-Series Image Data, 2012

Combining imaging and clinical data in manifold learning: Distance-based and graph-based extensions of Laplacian Eigenmaps.
Proceedings of the 9th IEEE International Symposium on Biomedical Imaging: From Nano to Macro, 2012

Unilateral hip joint segmentation with shape priors learned from missing data.
Proceedings of the 9th IEEE International Symposium on Biomedical Imaging: From Nano to Macro, 2012

Morphology-Based Interslice Interpolation on Manual Segmentations of Joint Bones and Muscles in MRI.
Proceedings of the 2012 International Conference on Digital Image Computing Techniques and Applications, 2012

2011
Symmetric diffeomorphic registration of fibre orientation distributions.
NeuroImage, 2011

Detecting hippocampal shape changes in Alzheimer's disease using statistical shape models.
Proceedings of the Medical Imaging 2011: Image Processing, 2011

Fast Automatic Multi-atlas Segmentation of the Prostate from 3D MR Images.
Proceedings of the Prostate Cancer Imaging. Image Analysis and Image-Guided Interventions, 2011

Local intensity model: An outlier detection framework with applications to white matter hyperintensity segmentation.
Proceedings of the 8th IEEE International Symposium on Biomedical Imaging: From Nano to Macro, 2011

Automated MR Hip Bone Segmentation.
Proceedings of the 2011 International Conference on Digital Image Computing: Techniques and Applications (DICTA), 2011

Automated 3D Segmentation and Analysis of Cotton Plants.
Proceedings of the 2011 International Conference on Digital Image Computing: Techniques and Applications (DICTA), 2011

Automated 3D Segmentation of Vertebral Bodies and Intervertebral Discs from MRI.
Proceedings of the 2011 International Conference on Digital Image Computing: Techniques and Applications (DICTA), 2011

Surface-Base Approach Using a Multi-scale EM-ICP Registration for Statistical Population Analysis.
Proceedings of the 2011 International Conference on Digital Image Computing: Techniques and Applications (DICTA), 2011

Automatic Segmentation of the Prostate in 3D Magnetic Resonance Images Using Case Specific Deformable Models.
Proceedings of the 2011 International Conference on Digital Image Computing: Techniques and Applications (DICTA), 2011

2010
Automatic Segmentation and Quantitative Analysis of the Articular Cartilages From Magnetic Resonance Images of the Knee.
IEEE Trans. Medical Imaging, 2010

Increasing Power to Predict Mild Cognitive Impairment Conversion to Alzheimer's Disease Using Hippocampal Atrophy Rate and Statistical Shape Models.
Proceedings of the Medical Image Computing and Computer-Assisted Intervention, 2010

Automatic MRI Atlas-Based External Beam Radiation Therapy Treatment Planning for Prostate Cancer.
Proceedings of the Prostate Cancer Imaging. Computer-Aided Diagnosis, 2010

Supervised method to build an atlas database for multi-atlas segmentation-propagation.
Proceedings of the Medical Imaging 2010: Computer-Aided Diagnosis, 2010

3D shape context surface registration for cortical mapping.
Proceedings of the 2010 IEEE International Symposium on Biomedical Imaging: From Nano to Macro, 2010

MILXView: A Medical Imaging, Analysis and Visualization Platform.
Proceedings of the E-Health - First IMIA/IFIP Joint Symposium, 2010

2009
Automated voxel-based 3D cortical thickness measurement in a combined Lagrangian-Eulerian PDE approach using partial volume maps.
Medical Image Anal., 2009

Non-rigid registration of small animal skeletons from micro-CT using 3D shape context.
Proceedings of the Medical Imaging 2009: Image Processing, 2009

Nonrigid correction of interleaving artefacts in pelvic MRI.
Proceedings of the Medical Imaging 2009: Image Processing, 2009

Partial Volume Estimation of Brain Cortex from MRI Using Topology-Corrected Segmentation.
Proceedings of the 2009 IEEE International Symposium on Biomedical Imaging: From Nano to Macro, Boston, MA, USA, June 28, 2009

Automated Segmentation of the Menisci from MR Images.
Proceedings of the 2009 IEEE International Symposium on Biomedical Imaging: From Nano to Macro, Boston, MA, USA, June 28, 2009

A Quantitative Comparison of Three Methods for Inflating Cortical Meshes.
Proceedings of the 2009 IEEE International Symposium on Biomedical Imaging: From Nano to Macro, Boston, MA, USA, June 28, 2009

2008
Automatic segmentation and analysis of Magnetic Resonance images of the knee bones and cartilages
PhD thesis, 2008

Appearance modeling of <sup>11</sup>C PiB PET images: Characterizing amyloid deposition in Alzheimer's disease, mild cognitive impairment and healthy aging.
NeuroImage, 2008

MR-Less High Dimensional Spatial Normalization of 11C PiB PET Images on a Population of Elderly, Mild Cognitive Impaired and Alzheimer Disease Patients.
Proceedings of the Medical Image Computing and Computer-Assisted Intervention, 2008

Automatic Delineation of Sulci and Improved Partial Volume Classification for Accurate 3D Voxel-Based Cortical Thickness Estimation from MR.
Proceedings of the Medical Image Computing and Computer-Assisted Intervention, 2008

Atlas based automated segmentation of the quadratus lumborum muscle using non-rigid registration on magnetic resonance images of the thoracolumbar region.
Proceedings of the 2008 IEEE International Symposium on Biomedical Imaging: From Nano to Macro, 2008

Generative atlases and atlas selection for C11-PIB PET-PET registration of elderly, mild cognitive impaired and Alzheimer disease patients.
Proceedings of the 2008 IEEE International Symposium on Biomedical Imaging: From Nano to Macro, 2008

Estimation of shape model parameters for 3D surfaces.
Proceedings of the 2008 IEEE International Symposium on Biomedical Imaging: From Nano to Macro, 2008

Improved cortical thickness measurement from MR images using partial volume estimation.
Proceedings of the 2008 IEEE International Symposium on Biomedical Imaging: From Nano to Macro, 2008

2007
MR image segmentation of the knee bone using phase information.
Medical Image Anal., 2007

Shape based segmentation of MRIs of the bones in the knee using phase and intensity information.
Proceedings of the Medical Imaging 2007: Image Processing, 2007

Automatic Segmentation of Articular Cartilage in Magnetic Resonance Images of the Knee.
Proceedings of the Medical Image Computing and Computer-Assisted Intervention - MICCAI 2007, 10th International Conference, Brisbane, Australia, October 29, 2007

Automatic Segmentation of the Bones from Mr Images of The Knee.
Proceedings of the 2007 IEEE International Symposium on Biomedical Imaging: From Nano to Macro, 2007

2006
A subdivision-based parametric deformable model for surface extraction and statistical shape modeling of the knee cartilages.
Proceedings of the Medical Imaging 2006: Visualization, 2006

MR Image Segmentation Using Phase Information and a Novel Multiscale Scheme.
Proceedings of the Medical Image Computing and Computer-Assisted Intervention, 2006

Automatic Segmentation of the Knee Bones using 3D Active Shape Models.
Proceedings of the 18th International Conference on Pattern Recognition (ICPR 2006), 2006

2005
The Use of Unwrapped Phase in MR Image Segmentation: A Preliminary Study.
Proceedings of the Medical Image Computing and Computer-Assisted Intervention, 2005

Automatic Initialization of 3D Deformable Models for Cartilage Segmentation.
Proceedings of the International Conference on Digital Image Computing: Techniques and Applications, 2005

3D Statistical Shape Models to Embed Spatial Relationship Information.
Proceedings of the Computer Vision for Biomedical Image Applications, 2005


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