Jungwei Fan

According to our database1, Jungwei Fan authored at least 45 papers between 2002 and 2024.

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Bibliography

2024
FedFSA: Hybrid and federated framework for functional status ascertainment across institutions.
J. Biomed. Informatics, 2024

2023
Retrospective content analysis of consumer product reviews related to chronic pain.
Frontiers Digit. Health, March, 2023

Classification of Patient Portal Messages with BERT-based Language Models.
Proceedings of the 11th IEEE International Conference on Healthcare Informatics, 2023

2022
Quality assessment of functional status documentation in EHRs across different healthcare institutions.
Frontiers Digit. Health, 2022

RxWhyQA: a clinical question-answering dataset with the challenge of multi-answer questions.
CoRR, 2022

Mining Transportation Issues from Patient Portal Messages.
Proceedings of the 10th IEEE International Conference on Healthcare Informatics, 2022

Effects of Information Masking in the Task-Specific Finetuning of a Transformers-Based Clinical Question-Answering Framework.
Proceedings of the 10th IEEE International Conference on Healthcare Informatics, 2022

Quality Assessment of Functional Status Documentation in EHR Across Institutions.
Proceedings of the AMIA 2022, 2022

2021
An aberration detection-based approach for sentinel syndromic surveillance of COVID-19 and other novel influenza-like illnesses.
J. Biomed. Informatics, 2021

The Implication of Latent Information Quality to the Reproducibility of Secondary Use of Electronic Health Records.
Proceedings of the MEDINFO 2021: One World, One Health - Global Partnership for Digital Innovation, 2021

Identification of Transportation Barriers in Patient Portal Messages via Deep Semantic Embeddings and Clustering.
Proceedings of the MEDINFO 2021: One World, One Health - Global Partnership for Digital Innovation, 2021

A Scoping Review of Informatics Research for Clinical Practice Variation.
Proceedings of the AMIA 2021, American Medical Informatics Association Annual Symposium, San Diego, CA, USA, October 30, 2021, 2021

Development of a Clinical Question-Answering Corpus with Realistic Multi-Answer Challenges.
Proceedings of the AMIA 2021, American Medical Informatics Association Annual Symposium, San Diego, CA, USA, October 30, 2021, 2021

Disparity analysis of patient portal messaging use for COVID-19 in urban versus rural locality.
Proceedings of the AMIA 2021, American Medical Informatics Association Annual Symposium, San Diego, CA, USA, October 30, 2021, 2021

Patient Asynchronous Response to Coronavirus Disease 2019 (COVID-19): A Retrospective Analysis of Patient Portal Messages.
Proceedings of the AMIA 2021, American Medical Informatics Association Annual Symposium, San Diego, CA, USA, October 30, 2021, 2021

2020
A review of auditing techniques for the Unified Medical Language System.
J. Am. Medical Informatics Assoc., 2020

A Deep Profiling and Visualization Framework to Audit Clinical Assessment Variation.
Proceedings of the 33rd IEEE International Symposium on Computer-Based Medical Systems, 2020

A Perturbation Approach to Assessing BERT Robustness for Different Linguistic Aspects in Medical Question-Answering.
Proceedings of the AMIA 2020, 2020

Big Impact from Small Data: Unsupervised Machine Learning Approaches for Chronic Pain Patient Subgrouping.
Proceedings of the AMIA 2020, 2020

Annotating Chronic Pain Episodes in EHR Text: Guideline Development and Corpus Analysis.
Proceedings of the AMIA 2020, 2020

Deep Semantic Embeddings and Clustering to Facilitate Identification of Transportation Barriers in Patient Portal Messages.
Proceedings of the AMIA 2020, 2020

How You Ask Matters: The Effect of Paraphrastic Questions to BERT Performance on a Clinical SQuAD Dataset.
Proceedings of the 3rd Clinical Natural Language Processing Workshop, 2020

2019
Desiderata for delivering NLP to accelerate healthcare AI advancement and a Mayo Clinic NLP-as-a-service implementation.
npj Digit. Medicine, 2019

Adapting and evaluating a deep learning language model for clinical why-question answering.
CoRR, 2019

Enhancing Clinical Information Retrieval through Context-Aware Queries and Indices.
Proceedings of the 2019 IEEE International Conference on Big Data (IEEE BigData), 2019

Tuning and Evaluating a State-of-the-Art Machine Comprehension Model for Clinical Why-Question Answering.
Proceedings of the AMIA 2019, 2019

2015
Parsing clinical text: how good are the state-of-the-art parsers?
BMC Medical Informatics Decis. Mak., 2015

Risk factor detection for heart disease by applying text analytics in electronic medical records.
J. Biomed. Informatics, 2015

Finding Difficult-to-Disambiguate Words: Towards an Efficient Workflow to Implement Word Sense Disambiguation.
Proceedings of the 2015 International Conference on Healthcare Informatics, 2015

2014
Building a Treebank of hospital discharge summaries.
Proceedings of the AMIA 2014, 2014

2013
Research and applications: Syntactic parsing of clinical text: guideline and corpus development with handling ill-formed sentences.
J. Am. Medical Informatics Assoc., 2013

Disorder Concept Identification from Clinical Notes: an Experience with the ShARe/CLEF 2013 Challenge.
Proceedings of the Working Notes for CLEF 2013 Conference , 2013

2011
Deriving a probabilistic syntacto-semantic grammar for biomedicine based on domain-specific terminologies.
J. Biomed. Informatics, 2011

An initial study of full parsing of clinical text using the Stanford Parser.
Proceedings of the 2011 IEEE International Conference on Bioinformatics and Biomedicine Workshops, 2011

2009
A review of auditing methods applied to the content of controlled biomedical terminologies.
J. Biomed. Informatics, 2009

Generating quality word sense disambiguation test sets based on MeSH indexing.
Proceedings of the AMIA 2009, 2009

2008
Semantic reclassification of the UMLS concepts.
Bioinform., 2008

Word Sense Disambiguation via Semantic Type Classification.
Proceedings of the AMIA 2008, 2008

2007
Research Paper: Semantic Classification of Biomedical Concepts Using Distributional Similarity.
J. Am. Medical Informatics Assoc., 2007

Using contextual and lexical features to restructure and validate the classification of biomedical concepts.
BMC Bioinform., 2007

Gene symbol disambiguation using knowledge-based profiles.
Bioinform., 2007

Using Distributional Analysis to Semantically Classify UMLS Concepts.
Proceedings of the MEDINFO 2007 - Proceedings of the 12th World Congress on Health (Medical) Informatics, 2007

Combining multiple evidence for gene symbol disambiguation.
Proceedings of the Biological, translational, and clinical language processing, 2007

Combining Contextual and Lexical Features to Classify UMLS Concepts.
Proceedings of the AMIA 2007, 2007

2002
Educating Knowledge Management Professionals in the Era of Knowledge Economy.
J. Inf. Knowl. Manag., 2002


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