Guo-Cheng Yuan

Orcid: 0000-0002-2283-4714

According to our database1, Guo-Cheng Yuan authored at least 20 papers between 2007 and 2024.

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Bibliography

2024
Orthogonal multimodality integration and clustering in single-cell data.
BMC Bioinform., December, 2024

2021
CUT&RUNTools 2.0: a pipeline for single-cell and bulk-level CUT&RUN and CUT&Tag data analysis.
Bioinform., 2021

2020
GiniClust3: a fast and memory-efficient tool for rare cell type identification.
BMC Bioinform., 2020

2019
The human body at cellular resolution: the NIH Human Biomolecular Atlas Program.
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Nat., 2019

BORIS promotes chromatin regulatory interactions in treatment-resistant cancer cells.
Nat., 2019

RESCUE: imputing dropout events in single-cell RNA-sequencing data.
BMC Bioinform., 2019

Session introduction.
Proceedings of the Biocomputing 2019: Proceedings of the Pacific Symposium, 2019

2018
Haystack: systematic analysis of the variation of epigenetic states and cell-type specific regulatory elements.
Bioinform., 2018

2015
A network model for angiogenesis in ovarian cancer.
BMC Bioinform., 2015

2014
Sexually-dimorphic targeting of functionally-related genes in COPD.
BMC Syst. Biol., 2014

Applications of alignment-free methods in epigenomics.
Briefings Bioinform., 2014

2011
A motif-independent metric for DNA sequence specificity.
BMC Bioinform., 2011

Workshop: Targeting mechanism of epigenetic factors.
Proceedings of the IEEE 1st International Conference on Computational Advances in Bio and Medical Sciences, 2011

Prediction of Epigenetic Target Sites by Using Genomic DNA Sequence.
Proceedings of the Handbook of Research on Computational and Systems Biology, 2011

2010
A hidden Markov model for detecting multi-gene chromatin domains.
BMC Bioinform., 2010

Epigenetic domains found in mouse embryonic stem cells via a hidden Markov model.
BMC Bioinform., 2010

2009
Targeted Recruitment of Histone Modifications in Humans Predicted by Genomic Sequences.
J. Comput. Biol., 2009

2008
Genomic Sequence Is Highly Predictive of Local Nucleosome Depletion.
PLoS Comput. Biol., 2008

2007
A New Multi-Layers Method to Analyze Gene Expression.
Proceedings of the Knowledge-Based Intelligent Information and Engineering Systems, 2007

Statistial Analysis of nucleosome occupancy and histone modification data.
Proceedings of the 7th IEEE International Conference on Bioinformatics and Bioengineering, 2007


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