George M. Church

According to our database, George M. Church authored at least 40 papers between 1999 and 2022.

Collaborative distances:

• Dijkstra number of four.
• Erdős number of four.

2022

Towards practical and robust DNA-based data archiving using the yin-yang codec system.

Zhi Ping, Shihong Chen, Guangyu Zhou, Xiaoluo Huang, Sha Joe Zhu, Haoling Zhang, Henry H. Lee, Zhaojun Lan, Jie Cui, Tai Chen, Wenwei Zhang, Huanming Yang, Xun Xu, George M. Church, Yue Shen

Nat. Comput. Sci., 2022

2021

Citizen-centered, auditable and privacy-preserving population genomics.

Dennis Grishin, Jean Louis Raisaro, Juan Ramón Troncoso-Pastoriza, Kamal Obbad, Kevin Quinn, Mickaël Misbach, Jared Gollhardt, João Sá Sousa, Jacques Fellay, George M. Church, Jean-Pierre Hubaux

Nat. Comput. Sci., 2021

TBDB: a database of structurally annotated T-box riboswitch: tRNA pairs.

Jorge A. Marchand, Merrick D. Pierson smela, Thomas H. H. Jordan, Kamesh Narasimhan, George M. Church

Nucleic Acids Res., 2021

2020

A haplotype-aware de novo assembly of related individuals using pedigree sequence graph.

Shilpa Garg, John Aach, Heng Li, Isaac Sebenius, Richard Durbin, George M. Church

Bioinform., 2020

2018

Single-Molecule Characterization of a Nanopore-Coupled Cas9 Protein on an Electrode Array.

Mirkó Palla, David B. Thompson, George M. Church

Proceedings of the 2018 IEEE SENSORS, New Delhi, India, October 28-31, 2018, 2018

2017

Nucleotide-time alignment for molecular recorders.

Thaddeus Cybulski, Edward S. Boyden, George M. Church, Keith E. J. Tyo, Konrad P. Körding

PLoS Comput. Biol., 2017

Variational auto-encoding of protein sequences.

Sam Sinai, Eric D. Kelsic, George M. Church, Martin A. Nowak

CoRR, 2017

2016

Forward Error Correction for DNA Data Storage.

Meinolf Blawat, Klaus Gaedke, Ingo Huetter, Xiao-Ming Chen, Brian Turczyk, Samuel A. Inverso, Benjamin Pruitt, George M. Church

Proceedings of the International Conference on Computational Science 2016, 2016

2015

Corrigendum: Biocontainment of genetically modified organisms by synthetic protein design.

Daniel J. Mandell, Marc J. Lajoie, Michael T. Mee, Ryo Takeuchi, Gleb Kuznetsov, Julie E. Norville, Christopher J. Gregg, Barry L. Stoddard, George M. Church

Nat., 2015

Biocontainment of genetically modified organisms by synthetic protein design.

Daniel J. Mandell, Marc J. Lajoie, Michael T. Mee, Ryo Takeuchi, Gleb Kuznetsov, Julie E. Norville, Christopher J. Gregg, Barry L. Stoddard, George M. Church

Nat., 2015

Puzzle Imaging: Using Large-scale Dimensionality Reduction Algorithms for Localization.

Joshua I. Glaser, Bradley M. Zamft, George M. Church, Konrad P. Körding

CoRR, 2015

2014

CHOPCHOP: a CRISPR/Cas9 and TALEN web tool for genome editing.

Tessa G. Montague, José M. Cruz, James A. Gagnon, George M. Church, Eivind Valen

Nucleic Acids Res., 2014

Spatial information in large-scale neural recordings.

Thaddeus Cybulski, Joshua I. Glaser, Adam Henry Marblestone, Bradley M. Zamft, Edward S. Boyden III, George M. Church, Konrad P. Körding

Frontiers Comput. Neurosci., 2014

The Naked Mole Rat Genome Resource: facilitating analyses of cancer and longevity-related adaptations.

Michael Keane, Thomas Craig, Jessica Alföldi, Aaron M. Berlin, Jeremy Johnson, Andrei Seluanov, Vera Gorbunova, Federica Di Palma, Kerstin Lindblad-Toh, George M. Church, João Pedro de Magalhães

Bioinform., 2014

Genome editing assessment using CRISPR Genome Analyzer (CRISPR-GA).

Marc Güell, Luhan Yang, George M. Church

Bioinform., 2014

2013

Redirector: Designing Cell Factories by Reconstructing the Metabolic Objective.

Graham Rockwell, Nicholas J. Guido, George M. Church

PLoS Comput. Biol., 2013

Statistical Analysis of Molecular Signal Recording.

Joshua I. Glaser, Bradley M. Zamft, Adam H. Marblestone, Jeffrey R. Moffitt, Keith E. J. Tyo, Edward S. Boyden III, George M. Church, Konrad P. Körding

PLoS Comput. Biol., 2013

Physical principles for scalable neural recording.

Adam H. Marblestone, Bradley M. Zamft, Yael Maguire, Mikhail G. Shapiro, Thaddeus Cybulski, Joshua I. Glaser, Dario Amodei, P. Benjamin Stranges, Reza Kalhor, David Dalrymple, Dongjin Seo, Elad Alon, Michel M. Maharbiz, Jose M. Carmena, Jan M. Rabaey, Edward S. Boyden III, George M. Church, Konrad P. Körding

Frontiers Comput. Neurosci., 2013

2009

Meta-analysis of age-related gene expression profiles identifies common signatures of aging.

João Pedro de Magalhães, João Curado, George M. Church

Bioinform., 2009

Design and self-assembly of DNA into nanoscale 3D shapes.

Shawn M. Douglas, Hendrik Dietz, Tim Liedl, Björn Högberg, Franziska Graf, Adam H. Marblestone, Surat Teerapittayanon, Alejandro Vazquez, George M. Church, William M. Shih

Proceedings of the International Conference on Computer Graphics and Interactive Techniques, 2009

2008

Free Factories: Unified Infrastructure for Data Intensive Web Services.

Alexander Wait Zaranek, Tom Clegg, Ward Vandewege, George M. Church

Proceedings of the 2008 USENIX Annual Technical Conference, 2008

2006

Identifying metabolic enzymes with multiple types of association evidence.

Peter V. Kharchenko, Lifeng Chen, Yoav Freund, Dennis Vitkup, George M. Church

BMC Bioinform., 2006

2005

Improving molecular cancer class discovery through sparse non-negative matrix factorization.

Yuan Gao, George M. Church

Bioinform., 2005

2004

yMGV: a cross-species expression data mining tool.

Gaëlle Lelandais, Stéphane Le Crom, Frédéric Devaux, Stéphane Vialette, George M. Church, Claude Jacq, Philippe Marc

Nucleic Acids Res., 2004

Prediction of similarly acting cis-regulatory modules by subsequence profiling and comparative genomics in Drosophila melanogaster and D.pseudoobscura.

Yonatan H. Grad, Frederick P. Roth, Marc S. Halfon, George M. Church

Bioinform., 2004

Preferred in vivo ubiquitination sites.

André Catic, Cal T. Collins, George M. Church, Hidde L. Ploegh

Bioinform., 2004

Filling gaps in a metabolic network using expression information.

Peter V. Kharchenko, Dennis Vitkup, George M. Church

Proceedings of the Proceedings Twelfth International Conference on Intelligent Systems for Molecular Biology/Third European Conference on Computational Biology 2004, 2004

Estimating and Improving Protein Interaction Error Rates.

Patrik D'haeseleer, George M. Church

Proceedings of the 3rd International IEEE Computer Society Computational Systems Bioinformatics Conference, 2004

2003

Predicting phenotype from patterns of annotation.

Oliver D. King, Jeffrey C. Lee, Aimée M. Dudley, Daniel M. Janse, George M. Church, Frederick P. Roth

Proceedings of the Eleventh International Conference on Intelligent Systems for Molecular Biology, June 29, 2003

2002

Automated modelling of signal transduction networks.

Martin Steffen, Allegra Petti, John Aach, Patrik D'haeseleer, George M. Church

BMC Bioinform., 2002

Discovery of DNA Regulatory Motifs.

Abigail Manson McGuire, George M. Church

Proceedings of the Gene Regulations and Metabolism - Postgenomic Computational Approaches, 2002

2001

A Dynamic Programming Approach to De Novo Peptide Sequencing via Tandem Mass Spectrometry.

Ting Chen, Ming-Yang Kao, Matthew Tepel, John Rush, George M. Church

J. Comput. Biol., 2001

Algorithms for Identifying Protein Cross-Links via Tandem Mass Spectrometry.

Ting Chen, Jacob D. Jaffe, George M. Church

J. Comput. Biol., 2001

Dynamic simulation of the human red blood cell metabolic network.

Neema Jamshidi, Jeremy S. Edwards, Tom Fahland, George M. Church, Bernhard O. Palsson

Bioinform., 2001

Aligning gene expression time series with time warping algorithms.

John Aach, George M. Church

Bioinform., 2001

Hunger for new technologies, metrics, and spatiotemporal models in functional genomic (abstract only).

George M. Church

Proceedings of the Fifth Annual International Conference on Computational Biology, 2001

2000

Fast assignment of protein structures to sequences using the Intermediate Sequence Library PDB-ISL.

Sarah A. Teichmann, Cyrus Chothia, George M. Church, Jong-Chan Park

Bioinform., 2000

PDB_ISL: an intermediate sequence library for protein structure assignment.

Sarah A. Teichmann, Cyrus Chothia, George M. Church, Jong-Chan Park

Proceedings of the Fourth Annual International Conference on Computational Molecular Biology, 2000

Biclustering of Expression Data.

Yizong Cheng, George M. Church

Proceedings of the Eighth International Conference on Intelligent Systems for Molecular Biology, 2000

1999

Modeling Gene Expression with Differential Equations.

Ting Chen, Hongyu L. He, George M. Church

Proceedings of the 4th Pacific Symposium on Biocomputing, 1999