David Mayerich

Orcid: 0000-0002-3949-6133

According to our database1, David Mayerich authored at least 38 papers between 2004 and 2024.

Collaborative distances:
  • Dijkstra number2 of four.
  • Erdős number3 of four.

Timeline

Legend:

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PhD thesis 
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Links

Online presence:

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Bibliography

2024
sCWatter: Open source coupled wave scattering simulation for spectroscopy and microscopy.
CoRR, 2024

GPU-Accelerated RSF Level Set Evolution for Large-Scale Microvascular Segmentation.
CoRR, 2024

Rapid hyperspectral photothermal mid-infrared spectroscopic imaging from sparse data for gynecologic cancer tissue subtyping.
CoRR, 2024

2022
Adaptive Compressive Sampling for Mid-Infrared Spectroscopic Imaging.
Proceedings of the 2022 IEEE International Conference on Image Processing, 2022

2020
Hyperspectral-Multispectral Image Fusion with Weighted LASSO.
CoRR, 2020

DVNet: A Memory-Efficient Three-Dimensional CNN for Large-Scale Neurovascular Reconstruction.
CoRR, 2020

Cellular/Vascular Reconstruction Using a Deep CNN for Semantic Image Preprocessing and Explicit Segmentation.
Proceedings of the Machine Learning for Medical Image Reconstruction, 2020

Segmenting Continuous but Sparsely-Labeled Structures in Super-Resolution Microscopy Using Perceptual Grouping.
Proceedings of the Medical Image Computing and Computer Assisted Intervention - MICCAI 2020, 2020

2019
Robust Tracing and Visualization of Heterogeneous Microvascular Networks.
IEEE Trans. Vis. Comput. Graph., 2019

TIMING 2.0: high-throughput single-cell profiling of dynamic cell-cell interactions by time-lapse imaging microscopy in nanowell grids.
Bioinform., 2019

Graph-Assisted Visualization of Microvascular Networks.
Proceedings of the 30th IEEE Visualization Conference, 2019

2018
Three-Dimensional GPU-Accelerated Active Contours for Automated Localization of Cells in Large Images.
CoRR, 2018

Digital Staining of High-Resolution FTIR Spectroscopic Images.
Proceedings of the 2018 IEEE Global Conference on Signal and Information Processing, 2018

2017
Phase retrieval based deconvolution algorithm in optical systems.
Proceedings of the 2017 IEEE Global Conference on Signal and Information Processing, 2017

A dual-modality optical coherence tomography and selective plane illumination microscopy system for mouse embryonic imaging.
Proceedings of the 2017 39th Annual International Conference of the IEEE Engineering in Medicine and Biology Society (EMBC), 2017

2016
Multimodal embryonic imaging using optical coherence tomography, selective plane illumination microscopy, and optical projection tomography.
Proceedings of the 38th Annual International Conference of the IEEE Engineering in Medicine and Biology Society, 2016

Fast submicrometer-scale imaging of whole zebrafish using the knife-edge scanning microscope.
Proceedings of the 38th Annual International Conference of the IEEE Engineering in Medicine and Biology Society, 2016

2014
Reconstruction, Techniques, and Validation.
Proceedings of the Encyclopedia of Computational Neuroscience, 2014

Connectome, Mouse.
Proceedings of the Encyclopedia of Computational Neuroscience, 2014

Breast histopathology using random decision forests-based classification of infrared spectroscopic imaging data.
Proceedings of the Medical Imaging 2014: Digital Pathology, 2014

2013
Real-time interactive data mining for chemical imaging information: application to automated histopathology.
BMC Bioinform., 2013

2012
NetMets: software for quantifying and visualizing errors in biological network segmentation.
BMC Bioinform., 2012

Optimizing the design of FT-IR spectroscopic imaging instruments to obtain increased spatial resolution of chemical species.
Proceedings of the 9th IEEE International Symposium on Biomedical Imaging: From Nano to Macro, 2012

Volume visualization in serial electron microscopy using local variance.
Proceedings of the 2012 IEEE Symposium on Biological Data Visualization, 2012

2011
Multiscale Exploration of Mouse Brain Microstructures Using the Knife-Edge Scanning Microscope Brain Atlas.
Frontiers Neuroinformatics, 2011

Fast cell detection in high-throughput imagery using GPU-accelerated machine learning.
Proceedings of the 8th IEEE International Symposium on Biomedical Imaging: From Nano to Macro, 2011

Automated cropping and artifact removal for knife-edge scanning microscopy.
Proceedings of the 8th IEEE International Symposium on Biomedical Imaging: From Nano to Macro, 2011

Knife-edge scanning microscopy for connectomics research.
Proceedings of the 2011 International Joint Conference on Neural Networks, 2011

Metrics for comparing explicit representations of interconnected biological networks.
Proceedings of the 2011 IEEE Symposium on Biological Data Visualization, 2011

2010
Imaging and Computational Methods for Exploring Sub-cellular Anatomy.
PhD thesis, 2010

2009
Hardware Accelerated Segmentation of Complex Volumetric Filament Networks.
IEEE Trans. Vis. Comput. Graph., 2009

2008
Visualization of Cellular and Microvascular Relationships.
IEEE Trans. Vis. Comput. Graph., 2008

Filament tracking and encoding for complex biological networks.
Proceedings of the 2008 ACM Symposium on Solid and Physical Modeling, 2008

Automated lateral sectioning for Knife-Edge Scanning Microscopy.
Proceedings of the 2008 IEEE International Symposium on Biomedical Imaging: From Nano to Macro, 2008

2007
Noise and Artifact Removal in Knife-Edge Scanning Microscopy.
Proceedings of the 2007 IEEE International Symposium on Biomedical Imaging: From Nano to Macro, 2007

2006
Visualization of Fibrous and Thread-like Data.
IEEE Trans. Vis. Comput. Graph., 2006

2004
Construction of anatomically correct models of mouse brain networks.
Neurocomputing, 2004

Compression, Segmentation, and Modeling of Large-Scale Filamentary Volumetric Data.
Proceedings of the 15th IEEE Visualization Conference, 2004


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