Barry Honig

Orcid: 0000-0002-1835-1031

According to our database1, Barry Honig authored at least 18 papers between 1991 and 2019.

Collaborative distances:
  • Dijkstra number2 of four.
  • Erdős number3 of four.

Timeline

Legend:

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PhD thesis 
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Links

Online presence:

On csauthors.net:

Bibliography

2019
Integration of Multi-Omics Data for Gene Regulatory Network Inference and Application to Breast Cancer.
IEEE ACM Trans. Comput. Biol. Bioinform., 2019

2018
Mutli-Features Prediction of Protein Translational Modification Sites.
IEEE ACM Trans. Comput. Biol. Bioinform., 2018

2017
miRNA-Disease Association Prediction with Collaborative Matrix Factorization.
Complex., 2017

2015
Predicting Peptide-Mediated Interactions on a Genome-Wide Scale.
PLoS Comput. Biol., 2015

2014
OnTheFly: a database of <i>Drosophila melanogaster</i> transcription factors and their binding sites.
Nucleic Acids Res., 2014

2013
PrePPI: a structure-informed database of protein-protein interactions.
Nucleic Acids Res., 2013

2012
Using systems and structure biology tools to dissect cellular phenotypes.
J. Am. Medical Informatics Assoc., 2012

2011
Using Structure to Explore the Sequence Alignment Space of Remote Homologs.
PLoS Comput. Biol., 2011

PredUs: a web server for predicting protein interfaces using structural neighbors.
Nucleic Acids Res., 2011

MarkUs: a server to navigate sequence-structure-function space.
Nucleic Acids Res., 2011

2010
VASP: A Volumetric Analysis of Surface Properties Yields Insights into Protein-Ligand Binding Specificity.
PLoS Comput. Biol., 2010

PUDGE: a flexible, interactive server for protein structure prediction.
Nucleic Acids Res., 2010

2006
VISTAL - a new 2D visualization tool of protein 3D structural alignments.
Bioinform., 2006

2003
Target Explorer: an automated tool for the identification of new target genes for a specified set of transcription factors.
Nucleic Acids Res., 2003

2002
Rapid grid-based construction of the molecular surface and the use of induced surface charge to calculate reaction field energies: Applications to the molecular systems and geometric objects.
J. Comput. Chem., 2002

Bioinformatics in structural genomics - Editorial.
Bioinform., 2002

1995
A Fast Multipole Boundary Element Method for Molecular Electrostatics: An Optimal Approach for Large Systems.
J. Comput. Chem., 1995

1991
The inclusion of electrostatic hydration energies in molecular mechanics calculations.
J. Comput. Aided Mol. Des., 1991


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