Zilin Ren

According to our database, Zilin Ren authored at least 6 papers between 2022 and 2024.

Collaborative distances:

• Dijkstra number of four.
• Erdős number of four.

2024

CodonBERT: a BERT-based architecture tailored for codon optimization using the cross-attention mechanism.

Zilin Ren, Lili Jiang, Yaxin Di, Dufei Zhang, Jianli Gong, Jianting Gong, Qiwei Jiang, Zhiguo Fu, Pingping Sun, Bo Zhou, Ming Ni

Bioinform., 2024

NASTRA: accurate analysis of short tandem repeat markers by nanopore sequencing with repeat-structure-aware algorithm.

Zilin Ren, Jiarong Zhang, Yixiang Zhang, Tingting Yang, Pingping Sun, Jiguo Xue, Xiaochen Bo, Bo Zhou, Jiangwei Yan, Ming Ni

Briefings Bioinform., 2024

2023

Model performance and interpretability of semi-supervised generative adversarial networks to predict oncogenic variants with unlabeled data.

Zilin Ren, Quan Li, Kajia Cao, Marilyn M. Li, Yunyun Zhou, Kai Wang

BMC Bioinform., December, 2023

THPLM: a sequence-based deep learning framework for protein stability changes prediction upon point variations using pretrained protein language model.

Jianting Gong, Lili Jiang, Yongbing Chen, Yixiang Zhang, Xue Li, Zhiqiang Ma, Zhiguo Fu, Fei He, Pingping Sun, Zilin Ren, Mingyao Tian

Bioinform., October, 2023

PLMTHP: An Ensemble Framework for Tumor Homing Peptide Prediction based on Protein Language Model.

Yongbing Chen, Han Qin, Xiaodan Cui, Tianhui Yang, Pingping Sun, Jianting Gong, Zilin Ren

Proceedings of the IEEE International Conference on Bioinformatics and Biomedicine, 2023

2022

Correction: Model performance and interpretability of semi-supervised generative adversarial networks to predict oncogenic variants with unlabeled data.

Zilin Ren, Quan Li, Kajia Cao, Marilyn M. Li, Yunyun Zhou, Kai Wang

BMC Bioinform., March, 2022