Zanoni Dias

Orcid: 0000-0003-3333-6822

According to our database1, Zanoni Dias authored at least 149 papers between 1998 and 2024.

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Bibliography

2024
Assignment of orthologous genes in unbalanced genomes using cycle packing of adjacency graphs.
J. Heuristics, December, 2024

Rearrangement Distance Problems: An updated survey.
ACM Comput. Surv., August, 2024

P-NOC: Adversarial training of CAM generating networks for robust weakly supervised semantic segmentation priors.
J. Vis. Commun. Image Represent., 2024

Maximum Alternating Balanced Cycle Decomposition and Applications in Sorting by Intergenic Operations Problems.
Proceedings of the Comparative Genomics - 21st International Conference, 2024

2023
TEMPROT: protein function annotation using transformers embeddings and homology search.
BMC Bioinform., December, 2023

Signed rearrangement distances considering repeated genes, intergenic regions, and indels.
J. Comb. Optim., September, 2023

Reversal and Transposition Distance on Unbalanced Genomes Using Intergenic Information.
J. Comput. Biol., August, 2023

Rearrangement distance with reversals, indels, and moves in intergenic regions on signed and unsigned permutations.
J. Bioinform. Comput. Biol., April, 2023

Genome Rearrangement Distance With a Flexible Intergenic Regions Aspect.
IEEE ACM Trans. Comput. Biol. Bioinform., 2023

Reversal and Indel Distance With Intergenic Region Information.
IEEE ACM Trans. Comput. Biol. Bioinform., 2023

Approximation algorithms for sorting by k-cuts on signed permutations.
J. Comb. Optim., 2023

P-NOC: Adversarial CAM Generation for Weakly Supervised Semantic Segmentation.
CoRR, 2023

Block Interchange and Reversal Distance on Unbalanced Genomes.
Proceedings of the Advances in Bioinformatics and Computational Biology, 2023

Algorithmic Fairness Applied to the Multi-Label Classification Problem.
Proceedings of the 18th International Joint Conference on Computer Vision, 2023

Sleep-Wake Classification using Recurrence Plots from Smartwatch Accelerometer Data.
Proceedings of the IEEE Latin American Conference on Computational Intelligence, 2023

Adversarial Feature Hallucination in a Supervised Contrastive Space for Few-Shot Learning of Provenance in Paintings.
Proceedings of the IEEE Latin American Conference on Computational Intelligence, 2023

Approximating Rearrangement Distances with Replicas and Flexible Intergenic Regions.
Proceedings of the Bioinformatics Research and Applications - 19th International Symposium, 2023

The Multi-attribute Fairer Cover Problem.
Proceedings of the Intelligent Systems - 12th Brazilian Conference, 2023

2022
A genetic programming approach for searching on nearest neighbors graphs.
Multim. Tools Appl., 2022

Labeled Cycle Graph for Transposition and Indel Distance.
J. Comput. Biol., 2022

A heuristic for the convex recoloring problem in graphs.
Int. Trans. Oper. Res., 2022

Algorithms for the Maximum Eulerian Cycle Decomposition Problem.
CoRR, 2022

A 1.375-Approximation Algorithm for Sorting by Transpositions with Faster Running Time.
Proceedings of the Advances in Bioinformatics and Computational Biology, 2022

MinMax-CAM: Improving Focus of CAM-based Visualization Techniques in Multi-label Problems.
Proceedings of the 17th International Joint Conference on Computer Vision, 2022

Sorting by k-Cuts on Signed Permutations.
Proceedings of the Comparative Genomics - 19th International Conference, 2022

A New Approach for the Reversal Distance with Indels and Moves in Intergenic Regions.
Proceedings of the Comparative Genomics - 19th International Conference, 2022

Transposition Distance Considering Intergenic Regions for Unbalanced Genomes.
Proceedings of the Bioinformatics Research and Applications - 18th International Symposium, 2022

Prediction of Protein Molecular Functions Using Transformers.
Proceedings of the Artificial Intelligence and Soft Computing, 2022

Bias Assessment in Medical Imaging Analysis: A Case Study on Retinal OCT Image Classification.
Proceedings of the 14th International Conference on Agents and Artificial Intelligence, 2022

Ensemble of Patches for COVID-19 X-Ray Image Classification.
Proceedings of the 14th International Conference on Agents and Artificial Intelligence, 2022

MinMax-CAM: Increasing Precision of Explaining Maps by Contrasting Gradient Signals and Regularizing Kernel Usage.
Proceedings of the Computer Vision, Imaging and Computer Graphics Theory and Applications, 2022

Protein Molecular Function Annotation Based on Transformer Embeddings.
Proceedings of the Intelligent Systems - 11th Brazilian Conference, 2022

2021
Manifold Learning for Real-World Event Understanding.
IEEE Trans. Inf. Forensics Secur., 2021

Heuristics for Genome Rearrangement Distance With Replicated Genes.
IEEE ACM Trans. Comput. Biol. Bioinform., 2021

Sorting Permutations by Intergenic Operations.
IEEE ACM Trans. Comput. Biol. Bioinform., 2021

Sorting Signed Permutations by Intergenic Reversals.
IEEE ACM Trans. Comput. Biol. Bioinform., 2021

Harnessing high-level concepts, visual, and auditory features for violence detection in videos.
J. Vis. Commun. Image Represent., 2021

Length-weighted λ-rearrangement distance.
J. Comb. Optim., 2021

Genome Rearrangement Distance with Reversals, Transpositions, and Indels.
J. Comput. Biol., 2021

Reversals and transpositions distance with proportion restriction.
J. Bioinform. Comput. Biol., 2021

Incorporating intergenic regions into reversal and transposition distances with indels.
J. Bioinform. Comput. Biol., 2021

Approximation algorithm for rearrangement distances considering repeated genes and intergenic regions.
Algorithms Mol. Biol., 2021

An improved approximation algorithm for the reversal and transposition distance considering gene order and intergenic sizes.
Algorithms Mol. Biol., 2021

Approximation Algorithms for Sorting λ-Permutations by λ-Operations.
Algorithms, 2021

Heuristics for Cycle Packing of Adjacency Graphs for Genomes with Repeated Genes.
Proceedings of the Advances in Bioinformatics and Computational Biology, 2021

Deep Learning-Based COVID-19 Diagnostics of Low-Quality CT Images.
Proceedings of the Advances in Bioinformatics and Computational Biology, 2021

Connoisseur: Provenance Analysis in Paintings.
Proceedings of the IEEE Symposium Series on Computational Intelligence, 2021

Protein secondary structure prediction based on fusion of machine learning classifiers.
Proceedings of the SAC '21: The 36th ACM/SIGAPP Symposium on Applied Computing, 2021

Leveraging emoji to improve sentiment classification of tweets.
Proceedings of the SAC '21: The 36th ACM/SIGAPP Symposium on Applied Computing, 2021

Reversal and Transposition Distance of Genomes Considering Flexible Intergenic Regions.
Proceedings of the XI Latin and American Algorithms, Graphs and Optimization Symposium, 2021

Data-Augmented Emoji Approach to Sentiment Classification of Tweets.
Proceedings of the Progress in Pattern Recognition, Image Analysis, Computer Vision, and Applications, 2021

MMEC: Multi-Modal Ensemble Classifier for Protein Secondary Structure Prediction.
Proceedings of the Computer Analysis of Images and Patterns, 2021

Authentication of Vincent van Gogh's Work.
Proceedings of the Computer Analysis of Images and Patterns, 2021

Reversals Distance Considering Flexible Intergenic Regions Sizes.
Proceedings of the Algorithms for Computational Biology - 8th International Conference, 2021

Reversal Distance on Genomes with Different Gene Content and Intergenic Regions Information.
Proceedings of the Algorithms for Computational Biology - 8th International Conference, 2021

2020
Heuristics for the Reversal and Transposition Distance Problem.
IEEE ACM Trans. Comput. Biol. Bioinform., 2020

On the Complexity of Some Variations of Sorting by Transpositions.
J. Univers. Comput. Sci., 2020

Sorting by Genome Rearrangements on Both Gene Order and Intergenic Sizes.
J. Comput. Biol., 2020

Sorting permutations by fragmentation-weighted operations.
J. Bioinform. Comput. Biol., 2020

Forensic Event Analysis: From Seemingly Unrelated Data to Understanding.
IEEE Secur. Priv., 2020

Classification of Musculoskeletal Abnormalities with Convolutional Neural Networks.
Proceedings of the Advances in Bioinformatics and Computational Biology, 2020

Heuristics for Breakpoint Graph Decomposition with Applications in Genome Rearrangement Problems.
Proceedings of the Advances in Bioinformatics and Computational Biology, 2020

COVID-19 X-ray Image Diagnostic with Deep Neural Networks.
Proceedings of the Advances in Bioinformatics and Computational Biology, 2020

Sorting by Reversals and Transpositions with Proportion Restriction.
Proceedings of the Advances in Bioinformatics and Computational Biology, 2020

ImTeNet: Image-Text Classification Network for Abnormality Detection and Automatic Reporting on Musculoskeletal Radiographs.
Proceedings of the Advances in Bioinformatics and Computational Biology, 2020

Fusion of BLAST and Ensemble of Classifiers for Protein Secondary Structure Prediction.
Proceedings of the 33rd SIBGRAPI Conference on Graphics, Patterns and Images, 2020

DuaLAnet: Dual Lesion Attention Network for Thoracic Disease Classification in Chest X-Rays.
Proceedings of the 2020 International Conference on Systems, Signals and Image Processing, 2020

Ensemble of Bidirectional Recurrent Networks and Random Forests for Protein Secondary Structure Prediction.
Proceedings of the 2020 International Conference on Systems, Signals and Image Processing, 2020

Multimodal Violence Detection in Videos.
Proceedings of the 2020 IEEE International Conference on Acoustics, 2020

Heuristics for Reversal Distance Between Genomes with Duplicated Genes.
Proceedings of the Algorithms for Computational Biology, 2020

A 3.5-Approximation Algorithm for Sorting by Intergenic Transpositions.
Proceedings of the Algorithms for Computational Biology, 2020

2019
Hierarchical Clustering-Based Graphs for Large Scale Approximate Nearest Neighbor Search.
Pattern Recognit., 2019

Sorting Permutations by λ-Operations.
J. Univers. Comput. Sci., 2019

On the Complexity of Sorting by Reversals and Transpositions Problems.
J. Comput. Biol., 2019

Sorting by Weighted Reversals and Transpositions.
J. Comput. Biol., 2019

A GRASP for the Convex Recoloring Problem in Graphs.
Proceedings of the tenth Latin and American Algorithms, Graphs and Optimization Symposium, 2019

Approximation Algorithms for Sorting Permutations by Length-Weighted Short Rearrangements.
Proceedings of the tenth Latin and American Algorithms, Graphs and Optimization Symposium, 2019

Super short operations on both gene order and intergenic sizes.
Algorithms Mol. Biol., 2019

Block-Interchange Distance Considering Intergenic Regions.
Proceedings of the Advances in Bioinformatics and Computational Biology, 2019

Image Semantic Representation for Event Understanding.
Proceedings of the IEEE International Workshop on Information Forensics and Security, 2019

Sorting by Reversals, Transpositions, and Indels on Both Gene Order and Intergenic Sizes.
Proceedings of the Bioinformatics Research and Applications - 15th International Symposium, 2019

Toward Subjective Violence Detection in Videos.
Proceedings of the IEEE International Conference on Acoustics, 2019

2018
Sorting permutations and binary strings by length-weighted rearrangements.
Theor. Comput. Sci., 2018

A GRASP-Based Heuristic for the Sorting by Length-Weighted Inversions Problem.
IEEE ACM Trans. Comput. Biol. Bioinform., 2018

Sorting signed circular permutations by super short operations.
Algorithms Mol. Biol., 2018

Super Short Reversals on Both Gene Order and Intergenic Sizes.
Proceedings of the Advances in Bioinformatics and Computational Biology, 2018

Sorting λ-Permutations by λ-Operations.
Proceedings of the Advances in Bioinformatics and Computational Biology, 2018

Sorting Permutations by Limited-Size Operations.
Proceedings of the Algorithms for Computational Biology - 5th International Conference, 2018

Heuristics for the Sorting Signed Permutations by Reversals and Transpositions Problem.
Proceedings of the Algorithms for Computational Biology - 5th International Conference, 2018

Approximation Algorithms for Sorting Permutations by Fragmentation-Weighted Operations.
Proceedings of the Algorithms for Computational Biology - 5th International Conference, 2018

Breaking down violence: A deep-learning strategy to model and classify violence in videos.
Proceedings of the 13th International Conference on Availability, Reliability and Security, 2018

2017
Sorting Circular Permutations by Super Short Reversals.
IEEE ACM Trans. Comput. Biol. Bioinform., 2017

New dissimilarity measures for image phylogeny reconstruction.
Pattern Anal. Appl., 2017

On the Sorting by Reversals and Transpositions Problem.
J. Univers. Comput. Sci., 2017

Sorting permutations by prefix and suffix rearrangements.
J. Bioinform. Comput. Biol., 2017

2016
Multiple Parenting Phylogeny Relationships in Digital Images.
IEEE Trans. Inf. Forensics Secur., 2016

Manifold Learning and Spectral Clustering for Image Phylogeny Forests.
IEEE Trans. Inf. Forensics Secur., 2016

Distances in multimedia phylogeny.
Int. Trans. Oper. Res., 2016

Hash-based frame selection for video phylogeny.
Proceedings of the IEEE International Workshop on Information Forensics and Security, 2016

2015
Sorting by weighted inversions considering length and symmetry.
BMC Bioinform., December, 2015

Approximation algorithms for sorting by length-weighted prefix and suffix operations.
Theor. Comput. Sci., 2015

Sorting by Prefix Reversals and Prefix Transpositions.
Discret. Appl. Math., 2015

Sorting signed permutations by short operations.
Algorithms Mol. Biol., 2015

Sorting Signed Circular Permutations by Super Short Reversals.
Proceedings of the Bioinformatics Research and Applications - 11th International Symposium, 2015

Phylogeny reconstruction for misaligned and compressed video sequences.
Proceedings of the 2015 IEEE International Conference on Image Processing, 2015

2014
Image Phylogeny Forests Reconstruction.
IEEE Trans. Inf. Forensics Secur., 2014

On Alternative Approaches for Approximating the Transposition Distance.
J. Univers. Comput. Sci., 2014

An Audit Tool for Genome Rearrangement Algorithms.
ACM J. Exp. Algorithmics, 2014

A general heuristic for genome rearrangement problems.
J. Bioinform. Comput. Biol., 2014

Length and Symmetry on the Sorting by Weighted Inversions Problem.
Proceedings of the Advances in Bioinformatics and Computational Biology, 2014

Sorting Permutations by Prefix and Suffix Versions of Reversals and Transpositions.
Proceedings of the LATIN 2014: Theoretical Informatics - 11th Latin American Symposium, Montevideo, Uruguay, March 31, 2014

Multiple parenting identification in image phylogeny.
Proceedings of the 2014 IEEE International Conference on Image Processing, 2014

Approximation algorithms for sorting by signed short reversals.
Proceedings of the 5th ACM Conference on Bioinformatics, 2014

An improved algorithm for the sorting by reversals and transpositions problem.
Proceedings of the 5th ACM Conference on Bioinformatics, 2014

On the Diameter of Rearrangement Problems.
Proceedings of the Algorithms for Computational Biology - First International Conference, 2014

On Sorting of Signed Permutations by Prefix and Suffix Reversals and Transpositions.
Proceedings of the Algorithms for Computational Biology - First International Conference, 2014

Heuristics for the Sorting by Length-Weighted Inversions Problem on Signed Permutations.
Proceedings of the Algorithms for Computational Biology - First International Conference, 2014

2013
Exploring heuristic and optimum branching algorithms for image phylogeny.
J. Vis. Commun. Image Represent., 2013

Heuristics for the Transposition Distance Problem.
J. Bioinform. Comput. Biol., 2013

Large-Scale Image Phylogeny: Tracing Image Ancestral Relationships.
IEEE Multim., 2013

Greedy Randomized Search Procedure to Sort Genomes using Symmetric, Almost-Symmetric and Unitary Inversions.
Proceedings of the ACM Conference on Bioinformatics, 2013

Heuristics for the Sorting by Length-Weighted Inversion Problem.
Proceedings of the ACM Conference on Bioinformatics, 2013

2012
Image Phylogeny by Minimal Spanning Trees.
IEEE Trans. Inf. Forensics Secur., 2012

SIS: a program to generate draft genome sequence scaffolds for prokaryotes.
BMC Bioinform., 2012

Sampling solution traces for the problem of sorting permutations by signed reversals.
Algorithms Mol. Biol., 2012

On the Approximation Ratio of Algorithms for Sorting by Transpositions without Using Cycle Graphs.
Proceedings of the Advances in Bioinformatics and Computational Biology, 2012

Sorting genomes using almost-symmetric inversions.
Proceedings of the ACM Symposium on Applied Computing, 2012

Improvements to a Multiple Protein Sequence Alignment Tool.
Proceedings of the BIOINFORMATICS 2012 - Proceedings of the International Conference on Bioinformatics Models, Methods and Algorithms, Vilamoura, Algarve, Portugal, 1, 2012

2011
Video Phylogeny: Recovering near-duplicate video relationships.
Proceedings of the 2011 IEEE International Workshop on Information Forensics and Security, 2011

Computing rearrangement distance of every permutation in the symmetric group.
Proceedings of the 2011 ACM Symposium on Applied Computing (SAC), TaiChung, Taiwan, March 21, 2011

Using inversion signatures to generate draft genome sequence scaffolds.
Proceedings of the ACM International Conference on Bioinformatics, 2011

Partial enumeration of solutions traces for the problem of sorting by signed reversals.
Proceedings of the ACM International Conference on Bioinformatics, 2011

2010
Cassis: detection of genomic rearrangement breakpoints.
Bioinform., 2010

First steps toward image phylogeny.
Proceedings of the 2010 IEEE International Workshop on Information Forensics and Security, 2010

An improved algorithm to enumerate all traces that sort a signed permutation by reversals.
Proceedings of the 2010 ACM Symposium on Applied Computing (SAC), 2010

A Simulation Tool for the Study of Symmetric Inversions in Bacterial Genomes.
Proceedings of the Comparative Genomics - International Workshop, 2010

An improved 1.375-approximation algorithm for the transposition distance problem.
Proceedings of the First ACM International Conference on Bioinformatics and Computational Biology, 2010

2009
Constraint Programming Models for Transposition Distance Problem.
Proceedings of the Advances in Bioinformatics and Computational Biology, 2009

2008
Transposition Distance Based on the Algebraic Formalism.
Proceedings of the Advances in Bioinformatics and Computational Biology, 2008

2007
New EST Trimming Procedure Applied to SUCEST Sequences.
Proceedings of the Advances in Bioinformatics and Computational Biology, 2007

2005
Comparison of Genomic DNA to cDNA Alignment Methods.
Proceedings of the Advances in Bioinformatics and Computational Biology, 2005

New EST Trimming Strategy.
Proceedings of the Advances in Bioinformatics and Computational Biology, 2005

2003
The Syntenic Distance Problem Using Only Fusions and Fussions.
Proceedings of the II Brazilian Workshop on Bioinformatics, 2003

2002
Rearranjo de genomas: uma coletanea de artigos.
PhD thesis, 2002

A Lower Bound on the Reversal and Transposition Diameter.
J. Comput. Biol., 2002

Sorting by Prefix Transpositions.
Proceedings of the String Processing and Information Retrieval, 2002

2001
Genome Rearrangements Distance by Fusion, Fission, and Transposition is Easy.
Proceedings of the Eighth International Symposium on String Processing and Information Retrieval, 2001

2000
A New Approach for Approximating the Tranposition Distance.
Proceedings of the Seventh International Symposium on String Processing and Information Retrieval, 2000

1998
Reversal and Transposition Distance of Linear Chromosomes.
Proceedings of the String Processing and Information Retrieval: A South American Symposium, 1998


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