Yves D'Aubenton-Carafa

According to our database, Yves D'Aubenton-Carafa authored at least 8 papers between 1999 and 2014.

Collaborative distances:

• Dijkstra number of five.
• Erdős number of four.

2014

CIRCUS: a package for Circos display of structural genome variations from paired-end and mate-pair sequencing data.

Delphine Naquin, Yves d'Aubenton-Carafa, Claude Thermes, Maud Silvain

BMC Bioinform., 2014

2013

Relating mammalian replication program to large-scale chromatin folding.

Benjamin Audit, Antoine Baker, Rasha E. Boulos, Hanna Julienne, Alain Arneodo, C. L. Chen, Yves d'Aubenton-Carafa, Claude Thermes, Arach Goldar, Guillaume Guilbaud, Aurélien Rappailles, Olivier Hyrien

Proceedings of the ACM Conference on Bioinformatics, 2013

2012

Replication Fork Polarity Gradients Revealed by Megabase-Sized U-Shaped Replication Timing Domains in Human Cell Lines.

Antoine Baker, Benjamin Audit, Chun-Long Chen, Benoit Moindrot, Antoine Leleu, Guillaume Guilbaud, Aurélien Rappailles, Cédric Vaillant, Arach Goldar, Fabien Mongelard, Yves D'Aubenton-Carafa, Olivier Hyrien, Claude Thermes, Alain Arneodo

PLoS Comput. Biol., 2012

BRASERO: A Resource for Benchmarking RNA Secondary Structure Comparison Algorithms.

Julien Allali, Cédric Saule, Cédric Chauve, Yves D'Aubenton-Carafa, Alain Denise, Christine Drevet, Pascal Ferraro, Daniel Gautheret, Claire Herrbach, Fabrice Leclerc, Antoine de Monte, Aïda Ouangraoua, Marie-France Sagot, Michel Termier, Claude Thermes, Hélène Touzet

Adv. Bioinformatics, 2012

2011

Evidence for Sequential and Increasing Activation of Replication Origins along Replication Timing Gradients in the Human Genome.

Guillaume Guilbaud, Aurélien Rappailles, Antoine Baker, Chun-Long Chen, Alain Arneodo, Arach Goldar, Yves D'Aubenton-Carafa, Claude Thermes, Benjamin Audit, Olivier Hyrien

PLoS Comput. Biol., 2011

2009

Fractals and Wavelets: What Can We Learn on Transcription and Replication from Wavelet-Based Multifractal Analysis of DNA Sequences.

Alain Arneodo, Benjamin Audit, Edward-Benedict Brodie of Brodie, Samuel Nicolay, Marie Touchon, Yves D'Aubenton-Carafa, Maxime Huvet, Claude Thermes

Proceedings of the Encyclopedia of Complexity and Systems Science, 2009

2006

Large-scale analysis of the human genome: From DNA sequence analysis to the modeling of replication in higher eukaryotes.

Alain Arneodo, Yves D'Aubenton-Carafa, Benjamin Audit, Edward-Benedict Brodie, Samuel Nicolay, Philippe Saint-Jean, Claude Thermes, Marie Touchon, Cédric Vaillant

Proceedings of the 14th European Signal Processing Conference, 2006

1999

A Multi-agent System Simulating Human Splice Site Recognition.

Laurence Vignal, Frédérique Lisacek, Joël Quinqueton, Yves D'Aubenton-Carafa, Claude Thermes

Comput. Chem., 1999