Yutaka Maruyama

According to our database, Yutaka Maruyama authored at least 11 papers between 2012 and 2024.

Collaborative distances:

• Dijkstra number of four.
• Erdős number of four.

2024

RISMiCal: A software package to perform fast RISM/3D-RISM calculations.

Yutaka Maruyama, Norio Yoshida

J. Comput. Chem., June, 2024

2023

Analysis of Protein Folding Simulation with Moving Root Mean Square Deviation.

Yutaka Maruyama, Ryo Igarashi, Yoshitaka Ushiku, Ayori Mitsutake

J. Chem. Inf. Model., March, 2023

2022

Computational Analysis of the SARS-CoV-2 RBD-ACE2-Binding Process Based on MD and the 3D-RISM Theory.

Norio Yoshida, Yutaka Maruyama, Ayori Mitsutake, Akiyoshi Kuroda, Ryo Fujiki, Kodai Kanemaru, Daisuke Okamoto, Alexander E. Kobryn, Sergey Gusarov, Haruyuki Nakano

J. Chem. Inf. Model., 2022

2020

Preliminary Performance Evaluation of the Fujitsu A64FX Using HPC Applications.

Tetsuya Odajima, Yuetsu Kodama, Miwako Tsuji, Motohiko Matsuda, Yutaka Maruyama, Mitsuhisa Sato

Proceedings of the IEEE International Conference on Cluster Computing, 2020

2018

Application of reference-modified density functional theory: Temperature and pressure dependences of solvation free energy.

Tomonari Sumi, Yutaka Maruyama, Ayori Mitsutake, Kenji Mochizuki, Kenichiro Koga

J. Comput. Chem., 2018

2016

Simulations of below-ground dynamics of fungi: 1.184 pflops attained by automated generation and autotuning of temporal blocking codes.

Takayuki Muranushi, Hideyuki Hotta, Junichiro Makino, Seiya Nishizawa, Hirofumi Tomita, Keigo Nitadori, Masaki Iwasawa, Natsuki Hosono, Yutaka Maruyama, Hikaru Inoue, Hisashi Yashiro, Yoshifumi Nakamura

Proceedings of the International Conference for High Performance Computing, 2016

Automatic generation of efficient codes from mathematical descriptions of stencil computation.

Takayuki Muranushi, Seiya Nishizawa, Hirofumi Tomita, Keigo Nitadori, Masaki Iwasawa, Yutaka Maruyama, Hisashi Yashiro, Yoshifumi Nakamura, Hideyuki Hotta, Junichiro Makino, Natsuki Hosono, Hikaru Inoue

Proceedings of the 5th International Workshop on Functional High-Performance Computing, 2016

2015

Erratum: "A solvation-free-energy functional: A reference-modified density functional formulation" [J. Comput. Chem 36, 1359-1369].

Tomonari Sumi, Ayori Mitsutake, Yutaka Maruyama

J. Comput. Chem., 2015

A solvation-free-energy functional: A reference-modified density functional formulation.

Tomonari Sumi, Ayori Mitsutake, Yutaka Maruyama

J. Comput. Chem., 2015

2014

Massively parallel implementation of 3D-RISM calculation with volumetric 3D-FFT.

Yutaka Maruyama, Norio Yoshida, Hiroto Tadano, Daisuke Takahashi, Mitsuhisa Sato, Fumio Hirata

J. Comput. Chem., 2014

2012

High performance 3-D FFT using multiple CUDA GPUs.

Akira Nukada, Yutaka Maruyama, Satoshi Matsuoka

Proceedings of the 5th Annual Workshop on General Purpose Processing with Graphics Processing Units, 2012