Yuqi Si

According to our database, Yuqi Si authored at least 17 papers between 2017 and 2021.

Collaborative distances:

• Dijkstra number of four.
• Erdős number of four.

2021

Deep representation learning of patient data from Electronic Health Records (EHR): A systematic review.

Yuqi Si, Jingcheng Du, Zhao Li, Xiaoqian Jiang, Timothy A. Miller, Fei Wang, W. Jim Zheng, Kirk Roberts

J. Biomed. Informatics, 2021

Generalized and transferable patient language representation for phenotyping with limited data.

Yuqi Si, Elmer V. Bernstam, Kirk Roberts

J. Biomed. Informatics, 2021

Extracting postmarketing adverse events from safety reports in the vaccine adverse event reporting system (VAERS) using deep learning.

Jingcheng Du, Yang Xiang, Madhuri Sankaranarayanapillai, Meng Zhang, Jingqi Wang, Yuqi Si, Huy Anh Pham, Hua Xu, Yong Chen, Cui Tao

J. Am. Medical Informatics Assoc., 2021

Spatial Distribution Pattern and Influencing Factors of Sports Tourism Resources in China.

Yifan Zuo, Huan Chen, Jincheng Pan, Yuqi Si, Rob Law, Mu Zhang

ISPRS Int. J. Geo Inf., 2021

Hierarchical Transformer Networks for Longitudinal Clinical Document Classification.

Yuqi Si, Kirk Roberts

CoRR, 2021

2020

Understanding spatial language in radiology: Representation framework, annotation, and spatial relation extraction from chest X-ray reports using deep learning.

Surabhi Datta, Yuqi Si, Laritza Rodriguez, Sonya E. Shooshan, Dina Demner-Fushman, Kirk Roberts

J. Biomed. Informatics, 2020

Deep learning in clinical natural language processing: a methodical review.

Stephen Wu, Kirk Roberts, Surabhi Datta, Jingcheng Du, Zongcheng Ji, Yuqi Si, Sarvesh Soni, Qiong Wang, Qiang Wei, Yang Xiang, Bo Zhao, Hua Xu

J. Am. Medical Informatics Assoc., 2020

Extracting Concepts for Precision Oncology from the Biomedical Literature.

Nicholas Greenspan, Yuqi Si, Kirk Roberts

CoRR, 2020

Deep Representation Learning of Patient Data from Electronic Health Records: A Systematic Review.

Yuqi Si, Jingcheng Du, Zhao Li, Xiaoqian Jiang, Timothy A. Miller, Fei Wang, W. Jim Zheng, Kirk Roberts

Proceedings of the AMIA 2020, 2020

Learning Patient Representations from Electronic Health Records across Diverse Data Types.

Timothy A. Miller, Dmitriy Dligach, Fei Wang, Yuqi Si, Funda Meric-Bernstam

Proceedings of the AMIA 2020, 2020

2019

Time-sensitive clinical concept embeddings learned from large electronic health records.

Yang Xiang, Jun Xu, Yuqi Si, Zhiheng Li, Laila Rasmy, Yujia Zhou, Firat Tiryaki, Fang Li, Yaoyun Zhang, Yonghui Wu, Xiaoqian Jiang, W. Jim Zheng, Degui Zhi, Cui Tao, Hua Xu

BMC Medical Informatics Decis. Mak., 2019

Enhancing clinical concept extraction with contextual embeddings.

Yuqi Si, Jingqi Wang, Hua Xu, Kirk E. Roberts

J. Am. Medical Informatics Assoc., 2019

Enhancing Clinical Concept Extraction with Contextual Embedding.

Yuqi Si, Jingqi Wang, Hua Xu, Kirk Roberts

CoRR, 2019

Relation Extraction from Clinical Narratives Using Pre-trained Language Models.

Qiang Wei, Zongcheng Ji, Yuqi Si, Jingcheng Du, Jingqi Wang, Firat Tiryaki, Stephen Wu, Cui Tao, Kirk Roberts, Hua Xu

Proceedings of the AMIA 2019, 2019

2018

A FrameNet for Cancer Information in Clinical Narratives: Schema and Annotation.

Kirk Roberts, Yuqi Si, Anshul Gandhi, Elmer V. Bernstam

Proceedings of the Eleventh International Conference on Language Resources and Evaluation, 2018

A Frame-Based NLP System for Cancer-Related Information Extraction.

Yuqi Si, Kirk E. Roberts

Proceedings of the AMIA 2018, 2018

2017

An OMOP CDM-Based Relational Database of Clinical Research Eligibility Criteria.

Yuqi Si, Chunhua Weng

Proceedings of the MEDINFO 2017: Precision Healthcare through Informatics, 2017