Yuji Zhang

Orcid: 0000-0002-5429-6762

Affiliations:
  • University of Maryland School of Medicine, Baltimore, MD, USA


According to our database1, Yuji Zhang authored at least 24 papers between 2006 and 2022.

Collaborative distances:
  • Dijkstra number2 of four.
  • Erdős number3 of four.

Timeline

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Bibliography

2022
Mining on Alzheimer's diseases related knowledge graph to identity potential AD-related semantic triples for drug repurposing.
BMC Bioinform., 2022

2021
Knowledge Graph-based Neurodegenerative Diseases and Diet Relationship Discovery.
CoRR, 2021

2019
A statistical analysis of vaccine-adverse event data.
BMC Medical Informatics Decis. Mak., 2019

2018
Adverse event detection by integrating twitter data and VAERS.
J. Biomed. Semant., 2018

2015
Identification of sex-associated network patterns in Vaccine-Adverse Event Association Network in VAERS.
J. Biomed. Semant., 2015

Next generation informatics for big data in precision medicine era.
BioData Min., 2015

Network analysis reveals stage-specific changes in zebrafish embryo development using time course whole transcriptome profiling and prior biological knowledge.
BioData Min., 2015

2014
Network-based analysis reveals distinct association patterns in a semantic MEDLINE-based drug-disease-gene network.
J. Biomed. Semant., 2014

Linked vaccine adverse event data from VAERS for biomedical data analysis and longitudinal studies.
BioData Min., 2014

Linked Vaccine Adverse Event Data Representation from VAERS for Biomedical Informatics Research.
Proceedings of the Trends and Applications in Knowledge Discovery and Data Mining, 2014

2013
Calculating Sample Size Estimates for RNA Sequencing Data.
J. Comput. Biol., 2013

Module-based breast cancer classification.
Int. J. Data Min. Bioinform., 2013

Network-based analysis of vaccine-related associations reveals consistent knowledge with the vaccine ontology.
J. Biomed. Semant., 2013

Analysis of Vaccine-related Networks using Semantic MEDLINE and the Vaccine Ontology.
Proceedings of the ICBO2013 Workshops: International Workshop on Vaccine and Drug Ontology Studies (VDOS 2013), International Workshop on Definitions in Ontologies (DO 2013), part of the Semantic Trilogy 2013 , Montreal, Quebec, Canada, July 6th, 2013

An integrative computational approach to identify disease-specific networks from PubMed literature information.
Proceedings of the 2013 IEEE International Conference on Bioinformatics and Biomedicine, 2013

2012
SAAP-RRBS: streamlined analysis and annotation pipeline for reduced representation bisulfite sequencing.
Bioinform., 2012

TREAT: a bioinformatics tool for variant annotations and visualizations in targeted and exome sequencing data.
Bioinform., 2012

Identification of aberrant pathways and network activities from high-throughput data.
Briefings Bioinform., 2012

Optimizing semantic MEDLINE for translational science studies using semantic web technologies.
Proceedings of the 2nd International Workshop on Managing Interoperability and compleXity in Health Systems, 2012

2010
Module-based biomarker discovery in breast cancer.
Proceedings of the 2010 IEEE International Conference on Bioinformatics and Biomedicine, 2010

2008
Network motif-based identification of transcription factor-target gene relationships by integrating multi-source biological data.
BMC Bioinform., 2008

Reverse Engineering Module Networks by PSO-RNN Hybrid Modeling.
Proceedings of the International Conference on Bioinformatics & Computational Biology, 2008

2006
Inferring Network Interactions Using Recurrent Neural Networks and Swarm Intelligence.
Proceedings of the 28th International Conference of the IEEE Engineering in Medicine and Biology Society, 2006

Inference of Gene Regulatory Networks from Time Course Gene Expression Data Using Neural Networks and Swarm Intelligence.
Proceedings of the 2006 IEEE Symposium on Computational Intelligence in Bioinformatics and Computational Biology, 2006


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