Yuefan Deng

According to our database, Yuefan Deng authored at least 59 papers between 1995 and 2024.

Collaborative distances:

• Dijkstra number of three.
• Erdős number of four.

2024

Exploring Robust Features for Improving Adversarial Robustness.

Hong Wang, Yuefan Deng, Shinjae Yoo, Yuewei Lin

IEEE Trans. Cybern., September, 2024

Learning coarse-grained force fields for fibrogenesis modeling.

Ziji Zhang, Georgios Kementzidis, Peng Zhang, Leili Zhang, James R. Kozloski, Adam Hansen, Miriam Rafailovich, Marcia Simon, Yuefan Deng

Comput. Phys. Commun., 2024

2023

AI-aided multiscale modeling of physiologically-significant blood clots.

Yicong Zhu, Changnian Han, Peng Zhang, Guojing Cong, James R. Kozloski, Chih-Chieh Yang, Leili Zhang, Yuefan Deng

Comput. Phys. Commun., June, 2023

Coarse-Grained Modeling of the SARS-CoV-2 Spike Glycoprotein by Physics-Informed Machine Learning.

David Liang, Ziji Zhang, Miriam Rafailovich, Marcia Simon, Yuefan Deng, Peng Zhang

Comput., February, 2023

2022

Optimal circulant graphs as low-latency network topologies.

Xiaolong Huang, Alexandre F. Ramos, Yuefan Deng

J. Supercomput., 2022

Scalable multiscale modeling of platelets with 100 million particles.

Changnian Han, Peng Zhang, Yicong Zhu, Guojing Cong, James R. Kozloski, Chih-Chieh Yang, Leili Zhang, Yuefan Deng

J. Supercomput., 2022

2021

Artificial intelligence for accelerating time integrations in multiscale modeling.

Changnian Han, Peng Zhang, Danny Bluestein, Guojing Cong, Yuefan Deng

J. Comput. Phys., 2021

Rapid analysis of streaming platelet images by semi-unsupervised learning.

Ziji Zhang, Peng Zhang, Peineng Wang, Jawaad Sheriff, Danny Bluestein, Yuefan Deng

Comput. Medical Imaging Graph., 2021

Enabling AI-Accelerated Multiscale Modeling of Thrombogenesis at Millisecond and Molecular Resolutions on Supercomputers.

Yicong Zhu, Peng Zhang, Changnian Han, Guojing Cong, Yuefan Deng

Proceedings of the High Performance Computing - 36th International Conference, 2021

AGKD-BML: Defense Against Adversarial Attack by Attention Guided Knowledge Distillation and Bi-directional Metric Learning.

Hong Wang, Yuefan Deng, Shinjae Yoo, Haibin Ling, Yuewei Lin

Proceedings of the 2021 IEEE/CVF International Conference on Computer Vision, 2021

2020

Multi-User Mobile Sequential Recommendation for Route Optimization.

Keli Xiao, Zeyang Ye, Lihao Zhang, Wenjun Zhou, Yong Ge, Yuefan Deng

ACM Trans. Knowl. Discov. Data, 2020

Optimal low-latency network topologies for cluster performance enhancement.

Yuefan Deng, Meng Guo, Alexandre F. Ramos, Xiaolong Huang, Zhipeng Xu, Weifeng Liu

J. Supercomput., 2020

A Structured Table of Graphs with Symmetries and Other Special Properties.

Yidan Zhang, Xiaolong Huang, Zhipeng Xu, Yuefan Deng

Symmetry, 2020

2019

Applying Simulated Annealing and Parallel Computing to the Mobile Sequential Recommendation.

Zeyang Ye, Keli Xiao, Yong Ge, Yuefan Deng

IEEE Trans. Knowl. Data Eng., 2019

Parallel MCMC methods for global optimization.

Lihao Zhang, Zeyang Ye, Yuefan Deng

Monte Carlo Methods Appl., 2019

A Structured Table of Graphs with Special Properties.

Yidan Zhang, Xiaolong Huang, Zhipeng Xu, Yuefan Deng

CoRR, 2019

Optimal Routing for a Family of Scalable Interconnection Networks.

Zhipeng Xu, Xiaolong Huang, Yuefan Deng

CoRR, 2019

Enumeration of regular graphs by using the cluster in high efficiency.

Zhipeng Xu, Xiaolong Huang, Yuefan Deng

CoRR, 2019

2018

Multi-User Mobile Sequential Recommendation: An Efficient Parallel Computing Paradigm.

Zeyang Ye, Lihao Zhang, Keli Xiao, Wenjun Zhou, Yong Ge, Yuefan Deng

Proceedings of the 24th ACM SIGKDD International Conference on Knowledge Discovery & Data Mining, 2018

A Unified Theory of the Mobile Sequential Recommendation Problem.

Zeyang Ye, Keli Xiao, Yuefan Deng

Proceedings of the IEEE International Conference on Data Mining, 2018

2017

Reducing the effects of compressibility in DPD-based blood flow simulations through severe stenotic microchannels.

Chao Gao, Peng Zhang, Gil Marom, Yuefan Deng, Danny Bluestein

J. Comput. Phys., 2017

Symmetry-guided design of topologies for supercomputer networks.

Alexandre F. Ramos, Yuefan Deng

CoRR, 2017

2016

Scalability Test of multiscale fluid-platelet model for three top supercomputers.

Peng Zhang, Na Zhang, Chao Gao, Li Zhang, Yu-Xiang Gao, Yuefan Deng, Danny Bluestein

Comput. Phys. Commun., 2016

2015

Evaluation of Various Networks Configurated by Adding Bypass or Torus Links.

Peng Zhang, Yuefan Deng, Rui Feng, Xingguo Luo, Jiangxing Wu

IEEE Trans. Parallel Distributed Syst., 2015

Creating interconnect topologies by algorithmic edge removal: MOD and SMOD graphs.

Marek T. Michalewicz, Lukasz Orlowski, Yuefan Deng

Supercomput. Front. Innov., 2015

Foreword.

Marek T. Michalewicz, Yuefan Deng

Supercomput. Front. Innov., 2015

A data-driven paradigm for mapping problems.

Peng Zhang, Ling Liu, Yuefan Deng

Parallel Comput., 2015

A multiple time stepping algorithm for efficient multiscale modeling of platelets flowing in blood plasma.

Peng Zhang, Na Zhang, Yuefan Deng, Danny Bluestein

J. Comput. Phys., 2015

Performance examinations of multiple time-stepping algorithms on stampede supercomputer.

Na Zhang, Peng Zhang, Li Zhang, Xiao Zhu, Lei Huang, Yuefan Deng

Proceedings of the 2015 XSEDE Conference: Scientific Advancements Enabled by Enhanced Cyberinfrastructure, St. Louis, MO, USA, July 26, 2015

Modeling Social Attention for Stock Analysis: An Influence Propagation Perspective.

Li Zhang, Keli Xiao, Qi Liu, Yefan Tao, Yuefan Deng

Proceedings of the 2015 IEEE International Conference on Data Mining, 2015

Investigation of Simulated Annealing Cooling Schedule for Mobile Recommendations.

Zeyang Ye, Keli Xiao, Yuefan Deng

Proceedings of the IEEE International Conference on Data Mining Workshop, 2015

2014

Fariness of task scheduling in high performance computing environments.

Art Sedighi, Yuefan Deng, Peng Zhang

Scalable Comput. Pract. Exp., 2014

Eigenanalysis-based task mapping on parallel computers with cellular networks.

Peng Zhang, Yu-Xiang Gao, Janet Fierson, Yuefan Deng

Math. Comput., 2014

Parameterizing the Morse potential for coarse-grained modeling of blood plasma.

Na Zhang, Peng Zhang, Wei Kang, Danny Bluestein, Yuefan Deng

J. Comput. Phys., 2014

2013

Analysis of Linpack and power efficiencies of the world's TOP500 supercomputers.

Yuefan Deng, Peng Zhang, Carlos Marques, Reid Powell, Li Zhang

Parallel Comput., 2013

Deadlock-Free Routing Algorithms for 6D Mesh/iBT Interconnection Networks.

Rui Feng, Peng Zhang, Yuefan Deng

Proceedings of the 14th ACIS International Conference on Software Engineering, 2013

2012

Design and Analysis of Pipelined Broadcast Algorithms for the All-Port Interlaced Bypass Torus Networks.

Peng Zhang, Yuefan Deng

IEEE Trans. Parallel Distributed Syst., 2012

An analysis of the topological properties of the interlaced bypass torus (iBT) networks.

Peng Zhang, Yuefan Deng

Appl. Math. Lett., 2012

Simulated Performance Evaluation of a 6D Mesh/iBT Interconnect.

Rui Feng, Peng Zhang, Yuefan Deng

Proceedings of the 13th ACIS International Conference on Software Engineering, 2012

2011

Interlacing Bypass Rings to Torus Networks for More Efficient Networks.

Peng Zhang, Reid Powell, Yuefan Deng

IEEE Trans. Parallel Distributed Syst., 2011

2009

A detailed analysis of communication load balance on BlueGene supercomputer.

Yongzhi Chen, Yuefan Deng

Comput. Phys. Commun., 2009

2008

Task mapping on supercomputers with cellular networks.

Yongzhi Chen, Yuefan Deng

Comput. Phys. Commun., 2008

Efficient Parallel Radiosity for Terascale Applications.

Riwei Wang, Hua Zhang, Yuefan Deng, Lei Ming

Proceedings of the International Conference on Computer Science and Software Engineering, 2008

2007

Electrostatic force computation for bio-molecules on supercomputers with torus networks.

Peter Rissland, Yuefan Deng

Parallel Comput., 2007

An efficient parallel implementation of the smooth particle mesh Ewald method for molecular dynamics simulations.

Kwang Jin Oh, Yuefan Deng

Comput. Phys. Commun., 2007

Error and timing analysis of multiple time-step integration methods for molecular dynamics.

Guowen Han, Yuefan Deng, James Glimm, Glenn J. Martyna

Comput. Phys. Commun., 2007

A fine grained parallel smooth particle mesh Ewald algorithm for biophysical simulation studies: Application to the 6-D torus QCDOC supercomputer.

Bin Fang, Glenn J. Martyna, Yuefan Deng

Comput. Phys. Commun., 2007

Performance of the 3D FFT on the 6D network torus QCDOC parallel supercomputer.

Bin Fang, Yuefan Deng, Glenn J. Martyna

Comput. Phys. Commun., 2007

Simulating botulinum neurotoxin with constant pH molecular dynamics in Generalized Born implicit solvent.

Yongzhi Chen, Xin Chen, Yuefan Deng

Comput. Phys. Commun., 2007

2004

Performance Models on QCDOC for Molecular Dynamics with Coulomb Potentials.

Yuefan Deng, James Glimm, James W. Davenport, X. Cai, E. Santos

Int. J. High Perform. Comput. Appl., 2004

2001

New trends in high performance computing.

Osman Yasar, Yuefan Deng, Robert E. Tuzun, D. Saltz

Parallel Comput., 2001

The performance of a supercomputer built with commodity components.

Yuefan Deng, Alex Korobka

Parallel Comput., 2001

2000

Approximate energy minimization for large Lennard-Jones clusters.

Yuefan Deng, Carlos Rivera

J. Glob. Optim., 2000

1999

Parallel Particle Simulations of Thin-Film Deposition.

R. Alan McCoy, Yuefan Deng

Int. J. High Perform. Comput. Appl., 1999

1998

Numerical Methods for Simulating Ginzburg-Landau Vortices.

Mo Mu, Yuefan Deng, Chung-Chiang Chou

SIAM J. Sci. Comput., 1998

Numerical Solutions of a Nonlinear Evolution System with Small Dissipation on Parallel Processors.

Chung-Chiang Chou, Yuefan Deng

J. Sci. Comput., 1998

1997

Decomposing 40 billion integers by four tetrahedral numbers.

Chung-Chiang Chou, Yuefan Deng

Math. Comput., 1997

1996

Analysis and prediction of hydrogen bonding in protein-DNA complexes using parallel processors.

Graham Campbell, Yuefan Deng, James Glimm, Yuan Wang, Qiqing Yu, Moisés Eisenberg, Arthur Grollman

J. Comput. Chem., 1996

1995

An Unconventional Method for Load Balancing.

Yuefan Deng, R. Alan McCoy, Robert B. Marr, Ronald F. Peierls

Proceedings of the Seventh SIAM Conference on Parallel Processing for Scientific Computing, 1995