Yuansong Zeng

According to our database, Yuansong Zeng authored at least 20 papers between 2016 and 2025.

Collaborative distances:

• Dijkstra number of four.
• Erdős number of four.

2025

Integrating single-cell multi-omics data through self-supervised clustering.

Yuansong Zeng, Jianing Chen, Zixiang Pan, Weijiang Yu, Yuedong Yang

Appl. Soft Comput., 2025

2024

Deciphering cell types by integrating scATAC-seq data with genome sequences.

Yuansong Zeng, Mai Luo, Ningyuan Shangguan, Peiyu Shi, Junxi Feng, Jin Xu, Ken Chen, Yutong Lu, Weijiang Yu, Yuedong Yang

Nat. Comput. Sci., April, 2024

Detecting novel cell type in single-cell chromatin accessibility data via open-set domain adaptation.

Yuefan Lin, Zixiang Pan, Yuansong Zeng, Yuedong Yang, Zhiming Dai

Briefings Bioinform., 2024

Accurately Deciphering Novel Cell Type in Spatially Resolved Single-Cell Data Through Optimal Transport.

Mai Luo, Yuansong Zeng, Jianing Chen, Ningyuan Shangguan, Wenhao Zhou, Yuedong Yang

Proceedings of the Bioinformatics Research and Applications - 20th International Symposium, 2024

Mamba-DTA: Drug-Target Binding Affinity Prediction with State Space Model.

Yulong Wu, Jin Xie, Jing Nie, Xiaohong Zhang, Yuansong Zeng

Proceedings of the IEEE International Conference on Bioinformatics and Biomedicine, 2024

Dual Interaction and Kernel-Diverse Network for Accurate Drug-Target Binding Affinity Prediction.

Yulong Wu, Jin Xie, Jing Nie, Jian Hu, Yuansong Zeng

Proceedings of the IEEE International Conference on Bioinformatics and Biomedicine, 2024

Graph learning of disentangled representation for accurately aligning multiple spatial slices.

Jianing Chen, Yuansong Zeng, Ningyuan Shangguan, Wenhao Zhou, Wenbing Li, Yuedong Yang

Proceedings of the 15th ACM International Conference on Bioinformatics, 2024

2023

Identifying B-cell epitopes using AlphaFold2 predicted structures and pretrained language model.

Yuansong Zeng, Zhuoyi Wei, Qianmu Yuan, Sheng Chen, Weijiang Yu, Yutong Lu, Jianzhao Gao, Yuedong Yang

Bioinform., April, 2023

Identifying spatial domain by adapting transcriptomics with histology through contrastive learning.

Yuansong Zeng, Rui Yin, Mai Luo, Jianing Chen, Zixiang Pan, Yutong Lu, Weijiang Yu, Yuedong Yang

Briefings Bioinform., March, 2023

2022

A parameter-free deep embedded clustering method for single-cell RNA-seq data.

Yuansong Zeng, Zhuoyi Wei, Fengqi Zhong, Zixiang Pan, Yutong Lu, Yuedong Yang

Briefings Bioinform., 2022

Spatial transcriptomics prediction from histology jointly through Transformer and graph neural networks.

Yuansong Zeng, Zhuoyi Wei, Weijiang Yu, Rui Yin, Yuchen Yuan, Bingling Li, Zhonghui Tang, Yutong Lu, Yuedong Yang

Briefings Bioinform., 2022

A robust and scalable graph neural network for accurate single-cell classification.

Yuansong Zeng, Zhuoyi Wei, Zixiang Pan, Yutong Lu, Yuedong Yang

Briefings Bioinform., 2022

SCdenoise: a reference-based scRNA-seq denoising method using semi-supervised learning.

Fengqi Zhong, Yuansong Zeng, Yubao Liu, Yuedong Yang

Proceedings of the IEEE International Conference on Bioinformatics and Biomedicine, 2022

A Meta-learning based Graph-Hierarchical Clustering Method for Single Cell RNA-Seq Data.

Zixiang Pan, Yuansong Zeng, Yuefan Lin, Weijiang Yu, Haokun Zhang, Yuedong Yang

Proceedings of the IEEE International Conference on Bioinformatics and Biomedicine, 2022

2021

scAdapt: virtual adversarial domain adaptation network for single cell RNA-seq data classification across platforms and species.

Xiang Zhou, Hua Chai, Yuansong Zeng, Huiying Zhao, Yuedong Yang

Briefings Bioinform., 2021

2020

Accurately Clustering Single-cell RNA-seq data by Capturing Structural Relations between Cells through Graph Convolutional Network.

Yuansong Zeng, Xiang Zhou, Jiahua Rao, Yutong Lu, Yuedong Yang

Proceedings of the IEEE International Conference on Bioinformatics and Biomedicine, 2020

2019

A Cylindrical Lens Antenna With Extremely Flat Beams.

Zhe Zhang, Shiwen Yang, Yuansong Zeng, Shiwei Qu, Yikai Chen

IEEE Access, 2019

2018

An Efficient File System for Hybrid In-Memory NVM and Block Devices.

Yuansong Zeng, Edwin Hsing-Mean Sha, Qingfeng Zhuge, Xianzhang Chen, Zhulin Ma, Lin Wu

Proceedings of the IEEE 7th Non-Volatile Memory Systems and Applications Symposium, 2018

Efficient wear leveling for inodes of file systems on persistent memories.

Xianzhang Chen, Edwin Hsing-Mean Sha, Yuansong Zeng, Chaoshu Yang, Weiwen Jiang, Qingfeng Zhuge

Proceedings of the 2018 Design, Automation & Test in Europe Conference & Exhibition, 2018

2016

The design of an efficient swap mechanism for hybrid DRAM-NVM systems.

Xianzhang Chen, Edwin Hsing-Mean Sha, Weiwen Jiang, Qingfeng Zhuge, Junxi Chen, Jiejie Qin, Yuansong Zeng

Proceedings of the 2016 International Conference on Embedded Software, 2016