Yuankai Huo

Orcid: 0000-0002-2096-8065

According to our database1, Yuankai Huo authored at least 209 papers between 2011 and 2024.

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Bibliography

2024
Efficient 3D Representation Learning for Medical Image Analysis.
World Sci. Annu. Rev. Artif. Intell., 2024

Cross-scale multi-instance learning for pathological image diagnosis.
Medical Image Anal., 2024

Automatic Image Unfolding and Stitching Framework for Esophageal Lining Video Based on Density-Weighted Feature Matching.
CoRR, 2024

Multi-Modality Conditioned Variational U-Net for Field-of-View Extension in Brain Diffusion MRI.
CoRR, 2024

Influence of Early through Late Fusion on Pancreas Segmentation from Imperfectly Registered Multimodal MRI.
CoRR, 2024

Optimizing Transmit Field Inhomogeneity of Parallel RF Transmit Design in 7T MRI using Deep Learning.
CoRR, 2024

Cross-Species Data Integration for Enhanced Layer Segmentation in Kidney Pathology.
CoRR, 2024

Persistence Image from 3D Medical Image: Superpixel and Optimized Gaussian Coefficient.
CoRR, 2024

Assessment of Cell Nuclei AI Foundation Models in Kidney Pathology.
CoRR, 2024

AI Foundation Models in Remote Sensing: A Survey.
CoRR, 2024

Adapting Mouse Pathological Model to Human Glomerular Lesion Segmentation.
CoRR, 2024

Dataset Distillation in Medical Imaging: A Feasibility Study.
CoRR, 2024

PFPs: Prompt-guided Flexible Pathological Segmentation for Diverse Potential Outcomes Using Large Vision and Language Models.
CoRR, 2024

Data-driven Nucleus Subclassification on Colon H&E using Style-transferred Digital Pathology.
CoRR, 2024

HoloHisto: End-to-end Gigapixel WSI Segmentation with 4K Resolution Sequential Tokenization.
CoRR, 2024

Weighted Circle Fusion: Ensembling Circle Representation from Different Object Detection Results.
CoRR, 2024

mTREE: Multi-Level Text-Guided Representation End-to-End Learning for Whole Slide Image Analysis.
CoRR, 2024

ExtremeMETA: High-speed Lightweight Image Segmentation Model by Remodeling Multi-channel Metamaterial Imagers.
CoRR, 2024

Field-of-View Extension for Diffusion MRI via Deep Generative Models.
CoRR, 2024

Adaptive Patching for High-resolution Image Segmentation with Transformers.
CoRR, 2024

Circle Representation for Medical Instance Object Segmentation.
CoRR, 2024

Foundation Models for Biomedical Image Segmentation: A Survey.
CoRR, 2024

Nucleus subtype classification using inter-modality learning.
CoRR, 2024

Super-Resolution Multi-Contrast Unbiased Eye Atlases With Deep Probabilistic Refinement.
CoRR, 2024

HATs: Hierarchical Adaptive Taxonomy Segmentation for Panoramic Pathology Image Analysis.
Proceedings of the Medical Image Computing and Computer Assisted Intervention - MICCAI 2024, 2024

Mitigating Over-Saturated Fluorescence Images Through a Semi-Supervised Generative Adversarial Network.
Proceedings of the IEEE International Symposium on Biomedical Imaging, 2024

PrPSeg: Universal Proposition Learning for Panoramic Renal Pathology Segmentation.
Proceedings of the IEEE/CVF Conference on Computer Vision and Pattern Recognition, 2024

2023
UNesT: Local spatial representation learning with hierarchical transformer for efficient medical segmentation.
Medical Image Anal., December, 2023

Semantic-Aware Contrastive Learning for Multi-Object Medical Image Segmentation.
IEEE J. Biomed. Health Informatics, September, 2023

Omni-Seg: A Scale-Aware Dynamic Network for Renal Pathological Image Segmentation.
IEEE Trans. Biomed. Eng., September, 2023

Body composition assessment with limited field-of-view computed tomography: A semantic image extension perspective.
Medical Image Anal., August, 2023

Enhancing thoracic disease detection using chest X-rays from PubMed Central Open Access.
Comput. Biol. Medicine, June, 2023

Learn2Reg: Comprehensive Multi-Task Medical Image Registration Challenge, Dataset and Evaluation in the Era of Deep Learning.
IEEE Trans. Medical Imaging, March, 2023

Reproducibility of Deep Learning Algorithms Developed for Medical Imaging Analysis: A Systematic Review.
J. Imaging Inform. Medicine, 2023

Predicting Age from White Matter Diffusivity with Residual Learning.
CoRR, 2023

DeformUX-Net: Exploring a 3D Foundation Backbone for Medical Image Segmentation with Depthwise Deformable Convolution.
CoRR, 2023

Deep conditional generative models for longitudinal single-slice abdominal computed tomography harmonization.
CoRR, 2023

Enhancing Hierarchical Transformers for Whole Brain Segmentation with Intracranial Measurements Integration.
CoRR, 2023

Evaluation Kidney Layer Segmentation on Whole Slide Imaging using Convolutional Neural Networks and Transformers.
CoRR, 2023

Cell Spatial Analysis in Crohn's Disease: Unveiling Local Cell Arrangement Pattern with Graph-based Signatures.
CoRR, 2023

Eosinophils Instance Object Segmentation on Whole Slide Imaging Using Multi-label Circle Representation.
CoRR, 2023

Deep Learning-Based Open Source Toolkit for Eosinophil Detection in Pediatric Eosinophilic Esophagitis.
CoRR, 2023

Spatial Pathomics Toolkit for Quantitative Analysis of Podocyte Nuclei with Histology and Spatial Transcriptomics Data in Renal Pathology.
CoRR, 2023

Leverage Weakly Annotation to Pixel-wise Annotation via Zero-shot Segment Anything Model for Molecular-empowered Learning.
CoRR, 2023

High-performance Data Management for Whole Slide Image Analysis in Digital Pathology.
CoRR, 2023

Multi-scale Multi-site Renal Microvascular Structures Segmentation for Whole Slide Imaging in Renal Pathology.
CoRR, 2023

Digital Modeling on Large Kernel Metamaterial Neural Network.
CoRR, 2023

All-in-SAM: from Weak Annotation to Pixel-wise Nuclei Segmentation with Prompt-based Finetuning.
CoRR, 2023

Intelligent Multi-channel Meta-imagers for Accelerating Machine Vision.
CoRR, 2023

Robust Fiber ODF Estimation Using Deep Constrained Spherical Deconvolution for Diffusion MRI.
CoRR, 2023

Multi-Contrast Computed Tomography Atlas of Healthy Pancreas.
CoRR, 2023

Democratizing Pathological Image Segmentation with Lay Annotators via Molecular-empowered Learning.
CoRR, 2023

An Accelerated Pipeline for Multi-label Renal Pathology Image Segmentation at the Whole Slide Image Level.
CoRR, 2023

An End-to-end Pipeline for 3D Slide-wise Multi-stain Renal Pathology Registration.
CoRR, 2023

Exploring shared memory architectures for end-to-end gigapixel deep learning.
CoRR, 2023

Segment Anything Model (SAM) for Digital Pathology: Assess Zero-shot Segmentation on Whole Slide Imaging.
CoRR, 2023

Zero-shot CT Field-of-view Completion with Unconditional Generative Diffusion Prior.
CoRR, 2023

A Unified Single-stage Learning Model for Estimating Fiber Orientation Distribution Functions on Heterogeneous Multi-shell Diffusion-weighted MRI.
CoRR, 2023

Deep constrained spherical deconvolution for robust harmonization.
Proceedings of the Medical Imaging 2023: Image Processing, 2023

Stratification of lung cancer risk with thoracic imaging phenotypes.
Proceedings of the Medical Imaging 2023: Image Processing, 2023


Unsupervised registration refinement for generating unbiased eye atlas.
Proceedings of the Medical Imaging 2023: Image Processing, 2023

Alleviating tiling effect by random walk sliding window in high-resolution histological whole slide image synthesis.
Proceedings of the Medical Imaging with Deep Learning, 2023

A Unified Learning Model for Estimating Fiber Orientation Distribution Functions on Heterogeneous Multi-shell Diffusion-Weighted MRI.
Proceedings of the Computational Diffusion MRI - 14th International Workshop, 2023

M<sup>2</sup>Fusion: Bayesian-Based Multimodal Multi-level Fusion on Colorectal Cancer Microsatellite Instability Prediction.
Proceedings of the Medical Image Computing and Computer Assisted Intervention - MICCAI 2023 Workshops, 2023

Scaling up 3D Kernels with Bayesian Frequency Re-parameterization for Medical Image Segmentation.
Proceedings of the Medical Image Computing and Computer Assisted Intervention - MICCAI 2023, 2023

Democratizing Pathological Image Segmentation with Lay Annotators via Molecular-Empowered Learning.
Proceedings of the Medical Image Computing and Computer Assisted Intervention - MICCAI 2023, 2023

Feasibility of Universal Anomaly Detection Without Knowing the Abnormality in Medical Images.
Proceedings of the Medical Image Learning with Limited and Noisy Data, 2023

3D UX-Net: A Large Kernel Volumetric ConvNet Modernizing Hierarchical Transformer for Medical Image Segmentation.
Proceedings of the Eleventh International Conference on Learning Representations, 2023

WearMask: Fast in-browser face mask detection with serverless edge computing for COVID-19.
Proceedings of the High Performance Computing for Imaging 2023, 2023

2022
Circle Representation for Medical Object Detection.
IEEE Trans. Medical Imaging, 2022

Guest Editorial Emerging Challenges for Deep Learning.
IEEE J. Biomed. Health Informatics, 2022

Workflow Integration of Research AI Tools into a Hospital Radiology Rapid Prototyping Environment.
J. Digit. Imaging, 2022

Integrating the BIDS Neuroimaging Data Format and Workflow Optimization for Large-Scale Medical Image Analysis.
J. Digit. Imaging, 2022

Single Slice Thigh CT Muscle Group Segmentation with Domain Adaptation and Self-Training.
CoRR, 2022

Adaptive Contrastive Learning with Dynamic Correlation for Multi-Phase Organ Segmentation.
CoRR, 2022

Compound Figure Separation of Biomedical Images: Mining Large Datasets for Self-supervised Learning.
CoRR, 2022

Omni-Seg+: A Scale-aware Dynamic Network for Pathological Image Segmentation.
CoRR, 2022

Glo-In-One: Holistic Glomerular Detection, Segmentation, and Lesion Characterization with Large-scale Web Image Mining.
CoRR, 2022

Pseudo-Label Guided Multi-Contrast Generalization for Non-Contrast Organ-Aware Segmentation.
CoRR, 2022

Deep Multi-modal Fusion of Image and Non-image Data in Disease Diagnosis and Prognosis: A Review.
CoRR, 2022

Survival Prediction of Brain Cancer with Incomplete Radiology, Pathology, Genomics, and Demographic Data.
CoRR, 2022

Characterizing Renal Structures with 3D Block Aggregate Transformers.
CoRR, 2022

Holistic Fine-grained GGS Characterization: From Detection to Unbalanced Classification.
CoRR, 2022

Corrigendum to "Acceleration of spleen segmentation with end-to-end deep learning method and automated pipeline" [Comput. Biol. Med. 107 (2019) 109-117].
Comput. Biol. Medicine, 2022

Multi-contrast computed tomography healthy kidney atlas.
Comput. Biol. Medicine, 2022

Reducing uncertainty in cancer risk estimation for patients with indeterminate pulmonary nodules using an integrated deep learning model.
Comput. Biol. Medicine, 2022

Large-Scale Patch-Wise Pathological Image Feature Dataset with a Hardware-agnostic Feature Extraction Tool.
Proceedings of the Medical Image Understanding and Analysis - 26th Annual Conference, 2022

Extending the value of routine lung screening CT with quantitative body composition assessment.
Proceedings of the Medical Imaging 2022: Image Processing, 2022

Ultra-high-resolution mapping of cortical layers 3T-guided 7T MRI.
Proceedings of the Medical Imaging 2022: Image Processing, 2022

Evaluating transformer-based semantic segmentation networks for pathological image segmentation.
Proceedings of the Medical Imaging 2022: Image Processing, 2022

Integrate memory efficiency methods for self-supervised learning on pathological image analysis.
Proceedings of the Medical Imaging 2022: Image Processing, 2022

Supervised deep generation of high-resolution arterial phase computed tomography kidney substructure atlas.
Proceedings of the Medical Imaging 2022: Image Processing, 2022

Single Dynamic Network for Multi-label Renal Pathology Image Segmentation.
Proceedings of the International Conference on Medical Imaging with Deep Learning, 2022

Reducing Positional Variance in Cross-sectional Abdominal CT Slices with Deep Conditional Generative Models.
Proceedings of the Medical Image Computing and Computer Assisted Intervention - MICCAI 2022, 2022

CircleSnake: Instance Segmentation with Circle Representation.
Proceedings of the Machine Learning in Medical Imaging - 13th International Workshop, 2022

Leverage Supervised and Self-supervised Pretrain Models for Pathological Survival Analysis via a Simple and Low-cost Joint Representation Tuning.
Proceedings of the Resource-Efficient Medical Image Analysis - First MICCAI Workshop, 2022

Cross-Scale Attention Guided Multi-instance Learning for Crohn's Disease Diagnosis with Pathological Images.
Proceedings of the Multiscale Multimodal Medical Imaging - Third International Workshop, 2022

Survival Prediction of Brain Cancer with Incomplete Radiology, Pathology, Genomic, and Demographic Data.
Proceedings of the Medical Image Computing and Computer Assisted Intervention - MICCAI 2022, 2022

MxIF Q-score: Biology-Informed Quality Assurance for Multiplexed Immunofluorescence Imaging.
Proceedings of the Medical Optical Imaging and Virtual Microscopy Image Analysis, 2022

Contrastive learning meets transfer learning: a case study in medical image analysis.
Proceedings of the Medical Imaging 2022: Computer-Aided Diagnosis, 2022

Multi-modal learning with missing data for cancer diagnosis using histopathological and genomic data.
Proceedings of the Medical Imaging 2022: Computer-Aided Diagnosis, 2022

MAG: A Simple Learning-Based Patient-Level Aggregation Method for Detecting Microsatellite Instability from Whole-Slide Images.
Proceedings of the 19th IEEE International Symposium on Biomedical Imaging, 2022

FedACA: An Adaptive Communication-Efficient Asynchronous Framework for Federated Learning.
Proceedings of the IEEE International Conference on Autonomic Computing and Self-Organizing Systems, 2022

2021
Body Part Regression With Self-Supervision.
IEEE Trans. Medical Imaging, 2021

Map3D: Registration-Based Multi-Object Tracking on 3D Serial Whole Slide Images.
IEEE Trans. Medical Imaging, 2021

Lesion-Harvester: Iteratively Mining Unlabeled Lesions and Hard-Negative Examples at Scale.
IEEE Trans. Medical Imaging, 2021

Reconstruction of respiratory variation signals from fMRI data.
NeuroImage, 2021

Faster Mean-shift: GPU-accelerated clustering for cosine embedding-based cell segmentation and tracking.
Medical Image Anal., 2021

High-resolution 3D abdominal segmentation with random patch network fusion.
Medical Image Anal., 2021

Omni-Seg: A Single Dynamic Network for Multi-label Renal Pathology Image Segmentation using Partially Labeled Data.
CoRR, 2021

Semi-Supervised Contrastive Learning for Remote Sensing: Identifying Ancient Urbanization in the South Central Andes.
CoRR, 2021

Learn2Reg: comprehensive multi-task medical image registration challenge, dataset and evaluation in the era of deep learning.
CoRR, 2021

Evaluating Transformer based Semantic Segmentation Networks for Pathological Image Segmentation.
CoRR, 2021

Technical Report: Quality Assessment Tool for Machine Learning with Clinical CT.
CoRR, 2021

Attention-Guided Supervised Contrastive Learning for Semantic Segmentation.
CoRR, 2021

Contrastive Learning Meets Transfer Learning: A Case Study In Medical Image Analysis.
CoRR, 2021

Towards Annotation-free Instance Segmentation and Tracking with Adversarial Simulations.
CoRR, 2021

ASIST: Annotation-free synthetic instance segmentation and tracking by adversarial simulations.
Comput. Biol. Medicine, 2021

Limitation of acyclic oriented graphs matching as cell tracking accuracy measure when evaluating mitosis.
Proceedings of the Medical Imaging 2021: Image Perception, 2021

Development and characterization of a chest CT atlas.
Proceedings of the Medical Imaging 2021: Image Processing, Online, February 15-19, 2021, 2021

Renal cortex, medulla and pelvicaliceal system segmentation on arterial phase CT images with random patch-based networks.
Proceedings of the Medical Imaging 2021: Image Processing, Online, February 15-19, 2021, 2021

Measure partial liver volumetric variations from paired inspiratory-expiratory chest CT scans.
Proceedings of the Medical Imaging 2021: Image Processing, Online, February 15-19, 2021, 2021

Improve global glomerulosclerosis classification with imbalanced data using CircleMix augmentation.
Proceedings of the Medical Imaging 2021: Image Processing, Online, February 15-19, 2021, 2021

GAN based unsupervised segmentation: should we match the exact number of objects.
Proceedings of the Medical Imaging 2021: Image Processing, Online, February 15-19, 2021, 2021

Construction of a multi-phase contrast computed tomography kidney atlas.
Proceedings of the Medical Imaging 2021: Image Processing, Online, February 15-19, 2021, 2021

Deep multi-path network integrating incomplete biomarker and chest CT data for evaluating lung cancer risk.
Proceedings of the Medical Imaging 2021: Image Processing, Online, February 15-19, 2021, 2021

VoxelEmbed: 3D Instance Segmentation and Tracking with Voxel Embedding based Deep Learning.
Proceedings of the Machine Learning in Medical Imaging - 12th International Workshop, 2021

Compound Figure Separation of Biomedical Images with Side Loss.
Proceedings of the Deep Generative Models, and Data Augmentation, Labelling, and Imperfections, 2021

Pancreas CT Segmentation by Predictive Phenotyping.
Proceedings of the Medical Image Computing and Computer Assisted Intervention - MICCAI 2021 - 24th International Conference, Strasbourg, France, September 27, 2021

SimTriplet: Simple Triplet Representation Learning with a Single GPU.
Proceedings of the Medical Image Computing and Computer Assisted Intervention - MICCAI 2021 - 24th International Conference, Strasbourg, France, September 27, 2021

Liver Tumor Localization and Characterization from Multi-phase MR Volumes Using Key-Slice Prediction: A Physician-Inspired Approach.
Proceedings of the Predictive Intelligence in Medicine - 4th International Workshop, 2021

Lung Cancer Risk Estimation with Incomplete Data: A Joint Missing Imputation Perspective.
Proceedings of the Medical Image Computing and Computer Assisted Intervention - MICCAI 2021 - 24th International Conference, Strasbourg, France, September 27, 2021

CaCL: Class-Aware Codebook Learning for Weakly Supervised Segmentation on Diffuse Image Patterns.
Proceedings of the Deep Generative Models, and Data Augmentation, Labelling, and Imperfections, 2021

From Brain to Body: Learning Low-Frequency Respiration and Cardiac Signals from fMRI Dynamics.
Proceedings of the Medical Image Computing and Computer Assisted Intervention - MICCAI 2021 - 24th International Conference, Strasbourg, France, September 27, 2021

Beds: Bagging Ensemble Deep Segmentation For Nucleus Segmentation With Testing Stage Stain Augmentation.
Proceedings of the 18th IEEE International Symposium on Biomedical Imaging, 2021

Rap-Net: Coarse-To-Fine Multi-Organ Segmentation With Single Random Anatomical Prior.
Proceedings of the 18th IEEE International Symposium on Biomedical Imaging, 2021

Random Multi-Channel Image Synthesis for Multiplexed Immunofluorescence Imaging.
Proceedings of the MICCAI Workshop on Computational Pathology, 2021

2020
Time-distanced gates in long short-term memory networks.
Medical Image Anal., 2020

Multi-path x-D recurrent neural networks for collaborative image classification.
Neurocomputing, 2020

Fully-Automated Liver Tumor Localization and Characterization from Multi-Phase MR Volumes Using Key-Slice ROI Parsing: A Physician-Inspired Approach.
CoRR, 2020

ASIST: Annotation-free synthetic instance segmentation and tracking for microscope video analysis.
CoRR, 2020

Faster Mean-shift: GPU-accelerated Embedding-clustering for Cell Segmentation and Tracking.
CoRR, 2020

Instance Segmentation for Whole Slide Imaging: End-to-End or Detect-Then-Segment.
CoRR, 2020

Harvesting, Detecting, and Characterizing Liver Lesions from Large-scale Multi-phase CT Data via Deep Dynamic Texture Learning.
CoRR, 2020

CircleNet: Anchor-free Detection with Circle Representation.
CoRR, 2020

The Value of Nullspace Tuning Using Partial Label Information.
CoRR, 2020

Internal-transfer weighting of multi-task learning for lung cancer detection.
Proceedings of the Medical Imaging 2020: Image Processing, 2020

Outlier guided optimization of abdominal segmentation.
Proceedings of the Medical Imaging 2020: Image Processing, 2020

Validation and optimization of multi-organ segmentation on clinical imaging archives.
Proceedings of the Medical Imaging 2020: Image Processing, 2020

Contrast phase classification with a generative adversarial network.
Proceedings of the Medical Imaging 2020: Image Processing, 2020

Semi-supervised multi-organ segmentation through quality assurance supervision.
Proceedings of the Medical Imaging 2020: Image Processing, 2020

Deep multi-task prediction of lung cancer and cancer-free progression from censored heterogenous clinical imaging.
Proceedings of the Medical Imaging 2020: Image Processing, 2020

Generalizing deep whole brain segmentation for pediatric and post-contrast MRI with augmented transfer learning.
Proceedings of the Medical Imaging 2020: Image Processing, 2020

EasierPath: An Open-Source Tool for Human-in-the-Loop Deep Learning of Renal Pathology.
Proceedings of the Interpretable and Annotation-Efficient Learning for Medical Image Computing, 2020

CircleNet: Anchor-Free Glomerulus Detection with Circle Representation.
Proceedings of the Medical Image Computing and Computer Assisted Intervention - MICCAI 2020, 2020

Prediction of Type II Diabetes Onset with Computed Tomography and Electronic Medical Records.
Proceedings of the Multimodal Learning for Clinical Decision Support and Clinical Image-Based Procedures, 2020

Reliable Liver Fibrosis Assessment from Ultrasound Using Global Hetero-Image Fusion and View-Specific Parameterization.
Proceedings of the Medical Image Computing and Computer Assisted Intervention - MICCAI 2020, 2020

Semi-supervised Machine Learning with MixMatch and Equivalence Classes.
Proceedings of the Interpretable and Annotation-Efficient Learning for Medical Image Computing, 2020

A Deep Pattern Recognition Approach for Inferring Respiratory Volume Fluctuations from fMRI Data.
Proceedings of the Medical Image Computing and Computer Assisted Intervention - MICCAI 2020, 2020

Co-heterogeneous and Adaptive Segmentation from Multi-source and Multi-phase CT Imaging Data: A Study on Pathological Liver and Lesion Segmentation.
Proceedings of the Computer Vision - ECCV 2020, 2020

JSSR: A Joint Synthesis, Segmentation, and Registration System for 3D Multi-modal Image Alignment of Large-Scale Pathological CT Scans.
Proceedings of the Computer Vision - ECCV 2020, 2020

2019
SynSeg-Net: Synthetic Segmentation Without Target Modality Ground Truth.
IEEE Trans. Medical Imaging, 2019

Splenomegaly Segmentation on Multi-Modal MRI Using Deep Convolutional Networks.
IEEE Trans. Medical Imaging, 2019

Vascular burden and APOE ε4 are associated with white matter microstructural decline in cognitively normal older adults.
NeuroImage, 2019

3D whole brain segmentation using spatially localized atlas network tiles.
NeuroImage, 2019

On-the-fly scheduling versus reservation-based scheduling for unpredictable workflows.
Int. J. High Perform. Comput. Appl., 2019

Stochastic tissue window normalization of deep learning on computed tomography.
CoRR, 2019

Enabling Multi-Shell b-Value Generalizability of Data-Driven Diffusion Models with Deep SHORE.
CoRR, 2019

Fully Automatic Liver Attenuation Estimation Combing CNN Segmentation and Morphological Operations.
CoRR, 2019

Acceleration of spleen segmentation with end-to-end deep learning method and automated pipeline.
Comput. Biol. Medicine, 2019

Reproducibility evaluation of SLANT whole brain segmentation across clinical magnetic resonance imaging protocols.
Proceedings of the Medical Imaging 2019: Image Processing, 2019

Lung cancer detection using co-learning from chest CT images and clinical demographics.
Proceedings of the Medical Imaging 2019: Image Processing, 2019

Improving splenomegaly segmentation by learning from heterogeneous multi-source labels.
Proceedings of the Medical Imaging 2019: Image Processing, 2019

Harmonizing 1.5T/3T diffusion weighted MRI through development of deep learning stabilized microarchitecture estimators.
Proceedings of the Medical Imaging 2019: Image Processing, 2019

Montage based 3D medical image retrieval from traumatic brain injury cohort using deep convolutional neural network.
Proceedings of the Medical Imaging 2019: Image Processing, 2019

Coronary calcium detection using 3D attention identical dual deep network based on weakly supervised learning.
Proceedings of the Medical Imaging 2019: Image Processing, 2019

Towards machine learning prediction of deep brain stimulation (DBS) intra-operative efficacy maps.
Proceedings of the Medical Imaging 2019: Image Processing, 2019

Cortical Surface Parcellation Using Spherical Convolutional Neural Networks.
Proceedings of the Medical Image Computing and Computer Assisted Intervention - MICCAI 2019, 2019

Enabling Multi-shell b-Value Generalizability of Data-Driven Diffusion Models with Deep SHORE.
Proceedings of the Medical Image Computing and Computer Assisted Intervention - MICCAI 2019, 2019

Distanced LSTM: Time-Distanced Gates in Long Short-Term Memory Models for Lung Cancer Detection.
Proceedings of the Machine Learning in Medical Imaging - 10th International Workshop, 2019

Learning 3D White Matter Microstructure from 2D Histology.
Proceedings of the 16th IEEE International Symposium on Biomedical Imaging, 2019

2018
Structural Medical Image Analyses using Consistent Volume and Surface Image Processing.
PhD thesis, 2018

Robust Multicontrast MRI Spleen Segmentation for Splenomegaly Using Multi-Atlas Segmentation.
IEEE Trans. Biomed. Eng., 2018

Towards Portable Large-Scale Image Processing with High-Performance Computing.
J. Digit. Imaging, 2018

Data-driven Probabilistic Atlases Capture Whole-brain Individual Variation.
CoRR, 2018

Constructing statistically unbiased cortical surface templates using feature-space covariance.
Proceedings of the Medical Imaging 2018: Image Processing, 2018

Splenomegaly segmentation using global convolutional kernels and conditional generative adversarial networks.
Proceedings of the Medical Imaging 2018: Image Processing, 2018

Improved stability of whole brain surface parcellation with multi-atlas segmentation.
Proceedings of the Medical Imaging 2018: Image Processing, 2018

Fully convolutional neural networks improve abdominal organ segmentation.
Proceedings of the Medical Imaging 2018: Image Processing, 2018

Less is More: Simultaneous View Classification and Landmark Detection for Abdominal Ultrasound Images.
Proceedings of the Medical Image Computing and Computer Assisted Intervention - MICCAI 2018, 2018

Spatially Localized Atlas Network Tiles Enables 3D Whole Brain Segmentation from Limited Data.
Proceedings of the Medical Image Computing and Computer Assisted Intervention - MICCAI 2018, 2018

Multi-atlas Parcellation in the Presence of Lesions: Application to Multiple Sclerosis.
Proceedings of the Patch-Based Techniques in Medical Imaging, 2018

Adversarial synthesis learning enables segmentation without target modality ground truth.
Proceedings of the 15th IEEE International Symposium on Biomedical Imaging, 2018

Technology Enablers for Big Data, Multi-Stage Analysis in Medical Image Processing.
Proceedings of the IEEE International Conference on Big Data (IEEE BigData 2018), 2018

2017
Neural correlates of familial obesity risk and overweight in adolescence.
NeuroImage, 2017

A Data Colocation Grid Framework for Big Data Medical Image Processing - Backend Design.
CoRR, 2017

Multi-atlas spleen segmentation on CT using adaptive context learning.
Proceedings of the Medical Imaging 2017: Image Processing, 2017

Multi-atlas segmentation enables robust multi-contrast MRI spleen segmentation for splenomegaly.
Proceedings of the Medical Imaging 2017: Image Processing, 2017

Gray Matter Surface Based Spatial Statistics (GS-BSS) in Diffusion Microstructure.
Proceedings of the Medical Image Computing and Computer Assisted Intervention - MICCAI 2017, 2017

4D Multi-atlas Label Fusion Using Longitudinal Images.
Proceedings of the Patch-Based Techniques in Medical Imaging, 2017

Automated Characterization of Pyelocalyceal Anatomy Using CT Urograms to Aid in Management of Kidney Stones.
Proceedings of the Computer Assisted and Robotic Endoscopy and Clinical Image-Based Procedures, 2017

Automated Characterization of Body Composition and Frailty with Clinically Acquired CT.
Proceedings of the Computational Methods and Clinical Applications in Musculoskeletal Imaging, 2017

2016
Consistent cortical reconstruction and multi-atlas brain segmentation.
NeuroImage, 2016

Combining multi-atlas segmentation with brain surface estimation.
Proceedings of the Medical Imaging 2016: Image Processing, 2016

Mapping Lifetime Brain Volumetry with Covariate-Adjusted Restricted Cubic Spline Regression from Cross-Sectional Multi-site MRI.
Proceedings of the Medical Image Computing and Computer-Assisted Intervention - MICCAI 2016, 2016

Predict Two-Dimensional Protein Folding Based on Hydrophobic-Polar Lattice Model and Chaotic Clonal Genetic Algorithm.
Proceedings of the Intelligent Data Engineering and Automated Learning - IDEAL 2016, 2016

2015
Multi-atlas learner fusion: An efficient segmentation approach for large-scale data.
Medical Image Anal., 2015

2011
Multi-channel Diffusion Tensor Image Registration via adaptive chaotic PSO.
J. Comput., 2011


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