Yu Zhang

Affiliations:

Pennsylvania State University, University Park, PA, USA
Harvard University, Cambridge, MA, USA (2005 - 2006)
University of Southern California, Los Angeles, CA, USA (PhD 2004)

According to our database¹, Yu Zhang authored at least 17 papers between 2003 and 2023.

Collaborative distances:

Dijkstra number² of three.
Erdős number³ of four.

Timeline

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Book

In proceedings

Article

PhD thesis

Dataset

Other

Bibliography

2023

Snapshot: a package for clustering and visualizing epigenetic history during cell differentiation.

[BibT_eX]

[DOI]

BMC Bioinform., December, 2023

2021

S3V2-IDEAS: a package for normalizing, denoising and integrating epigenomic datasets across different cell types.

[BibT_eX]

[DOI]

Bioinform., 2021

2020

The changing mouse embryo transcriptome at whole tissue and single-cell resolution.

[BibT_eX]

[DOI]

Nat., 2020

2019

Systems Biology in Heterogenous Tissues: Integrating Multiple *Omics Datasets to Understand Hematopoietic Differentiation.

[BibT_eX]

[DOI]

Proceedings of the 19th IEEE International Conference on Bioinformatics and Bioengineering, 2019

2014

MRHMMs: Multivariate Regression Hidden Markov Models and the variantS.

[BibT_eX]

[DOI]

Bioinform., 2014

2010

An Effective Method for Detecting Gene Conversion Events in Whole Genomes.

[BibT_eX]

[DOI]

J. Comput. Biol., 2010

Calling SNPs without a reference sequence.

[BibT_eX]

[DOI]

BMC Bioinform., 2010

A varying threshold method for ChIP peak-calling using multiple sources of information.

[BibT_eX]

[DOI]

Kuan-Bei Chen

Yu Zhang

Bioinform., 2010

Optimization Methods for Selecting Founder Populations for Captive Breeding of Endangered Species.

[BibT_eX]

[DOI]

Proceedings of the Biocomputing 2010: Proceedings of the Pacific Symposium, 2010

2009

Evolutionary History Reconstruction for Mammalian Complex Gene Clusters.

[BibT_eX]

[DOI]

J. Comput. Biol., 2009

Whole-Genome Analysis of Gene Conversion Events.

[BibT_eX]

[DOI]

Proceedings of the Comparative Genomics, International Workshop, 2009

Simultaneous History Reconstruction for Complex Gene Clusters in Multiple Species.

[BibT_eX]

[DOI]

Proceedings of the Biocomputing 2009: Proceedings of the Pacific Symposium, 2009

2008

Reconstructing the Evolutionary History of Complex Human Gene Clusters.

[BibT_eX]

[DOI]

Proceedings of the Research in Computational Molecular Biology, 2008

2006

Alignment of Optical Maps.

[BibT_eX]

[DOI]

J. Comput. Biol., 2006

Refinement of optical map assemblies.

[BibT_eX]

[DOI]

Bioinform., 2006

2003

An Eulerian Path Approach to Global Multiple Alignment for DNA Sequences.

[BibT_eX]

[DOI]

Yu Zhang

Michael S. Waterman

J. Comput. Biol., 2003

Eulerian Path Methods for Multiple Sequence Alignment.

[BibT_eX]

[DOI]

Michael S. Waterman

Yu Zhang

Proceedings of the 2nd IEEE Computer Society Bioinformatics Conference, 2003

Yu Zhang

Timeline

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Bibliography

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