Yu Takano

Orcid: 0000-0002-4165-8672

According to our database1, Yu Takano authored at least 11 papers between 2010 and 2022.

Collaborative distances:
  • Dijkstra number2 of five.
  • Erdős number3 of five.

Timeline

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Bibliography

2022
Global Analysis of Heme Proteins Elucidates the Correlation between Heme Distortion and the Heme-Binding Pocket.
J. Chem. Inf. Model., 2022

2020
PyDISH: database and analysis tools for heme porphyrin distortion in heme proteins.
Database J. Biol. Databases Curation, 2020

2019
Hydrogen bond donors and acceptors are generally depolarized in α-helices as revealed by a molecular tailoring approach.
J. Comput. Chem., 2019

2018
Density functional study of porphyrin distortion effects on redox potential of heme.
J. Comput. Chem., 2018

2017
Common folding processes of mini-proteins: Partial formations of secondary structures initiate the immediate protein folding.
J. Comput. Chem., 2017

2016
Development of massive multilevel molecular dynamics simulation program, platypus (PLATform for dYnamic protein unified simulation), for the elucidation of protein functions.
J. Comput. Chem., 2016

Inverse Ubbelohde effect in the short hydrogen bond of photosystem II: Relation between H/D isotope effect and symmetry in potential energy profile.
J. Comput. Chem., 2016

2015
Enhanced conformational sampling method for proteins based on the TaBoo SeArch algorithm: Application to the folding of a mini-protein, chignolin.
J. Comput. Chem., 2015

Protein folding pathways extracted by OFLOOD: Outlier FLOODing method.
J. Comput. Chem., 2015

2011
Theory for trivial trajectory parallelization of multicanonical molecular dynamics and application to a polypeptide in water.
J. Comput. Chem., 2011

2010
Electronic structures of heme <i>a</i> of cytochrome <i>c</i> oxidase in the redox states - Charge density migration to the propionate groups of heme <i>a</i>.
J. Comput. Chem., 2010


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