Yonghui Wu
Orcid: 0000-0002-6780-6135
According to our database1,
Yonghui Wu
authored at least 229 papers
between 2000 and 2024.
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Bibliography
2024
Extracting Pulmonary Nodules and Nodule Characteristics from Radiology Reports of Lung Cancer Screening Patients Using Transformer Models.
J. Heal. Informatics Res., September, 2024
Explicit Performance Containment Control for Multiagent Systems With Leaders Bounded Unknown Input by Hybrid Time-Event Triggered Mechanism.
IEEE Trans. Aerosp. Electron. Syst., August, 2024
How Responsible Innovation Builds Business Network Resilience to Achieve Sustainable Performance During Global Outbreaks: An Extended Resource-Based View.
IEEE Trans. Engineering Management, 2024
Identifying social determinants of health from clinical narratives: A study of performance, documentation ratio, and potential bias.
J. Biomed. Informatics, 2024
Model tuning or prompt Tuning? a study of large language models for clinical concept and relation extraction.
J. Biomed. Informatics, 2024
UF-HOBI at "Discharge Me!": A Hybrid Solution for Discharge Summary Generation Through Prompt-based Tuning of GatorTronGPT Models.
CoRR, 2024
MAP: Low-compute Model Merging with Amortized Pareto Fronts via Quadratic Approximation.
CoRR, 2024
Use of natural language processing to extract and classify papillary thyroid cancer features from surgical pathology reports.
CoRR, 2024
Automatic Summarization of Doctor-Patient Encounter Dialogues Using Large Language Model through Prompt Tuning.
CoRR, 2024
Improving Generalizability of Extracting Social Determinants of Health Using Large Language Models through Prompt-tuning.
CoRR, 2024
Narrative Feature or Structured Feature? A Study of Large Language Models to Identify Cancer Patients at Risk of Heart Failure.
CoRR, 2024
Feasibility of Identifying Factors Related to Alzheimer's Disease and Related Dementia in Real-World Data.
CoRR, 2024
Comprehensive Study on German Language Models for Clinical and Biomedical Text Understanding.
Proceedings of the 2024 Joint International Conference on Computational Linguistics, 2024
2023
The role of health system penetration rate in estimating the prevalence of type 1 diabetes in children and adolescents using electronic health records.
J. Am. Medical Informatics Assoc., December, 2023
Leveraging natural language processing to identify eligible lung cancer screening patients with the electronic health record.
Int. J. Medical Informatics, September, 2023
Clinical concept and relation extraction using prompt-based machine reading comprehension.
J. Am. Medical Informatics Assoc., August, 2023
A robust hybrid triggered mechanism for consensus control of multi-agent systems under directed graphs.
Autom., August, 2023
Contextualized medication information extraction using Transformer-based deep learning architectures.
J. Biomed. Informatics, June, 2023
Output Consensus of Heterogeneous Linear Multiagent Systems With Directed Graphs via Adaptive Dynamic Event-Triggered Mechanism.
IEEE Trans. Cybern., 2023
npj Digit. Medicine, 2023
Assess the documentation of cognitive tests and biomarkers in electronic health records via natural language processing for Alzheimer's disease and related dementias.
Int. J. Medical Informatics, 2023
Generative Large Language Models Are All-purpose Text Analytics Engines: Text-to-text Learning Is All Your Need.
CoRR, 2023
Extracting Thyroid Nodules Characteristics from Ultrasound Reports Using Transformer-based Natural Language Processing Methods.
CoRR, 2023
Identifying Symptoms of Delirium from Clinical Narratives Using Natural Language Processing.
CoRR, 2023
Real-World Effectiveness of Lung Cancer Screening Using Deep Learning-Based Counterfactual Prediction.
Proceedings of the MEDINFO 2023 - The Future Is Accessible, 2023
Exploring the Effect of Eligibility Criteria on AD Severity and Severe Adverse Event in Eligible Patients.
Proceedings of the 11th IEEE International Conference on Healthcare Informatics, 2023
Proceedings of the 2023 Conference on Empirical Methods in Natural Language Processing, 2023
Proceedings of the Findings of the Association for Computational Linguistics: EMNLP 2023, 2023
Proceedings of the IEEE/CVF Conference on Computer Vision and Pattern Recognition, 2023
Proceedings of the IEEE Automatic Speech Recognition and Understanding Workshop, 2023
Proceedings of the 15th IEEE International Conference on ASIC, 2023
2022
Leader-Following and Leaderless Consensus of Linear Multiagent Systems Under Directed Graphs by Double Dynamic Event-Triggered Mechanism.
IEEE Trans. Syst. Man Cybern. Syst., 2022
Trans. Mach. Learn. Res., 2022
Trans. Mach. Learn. Res., 2022
Distributed Event-Triggered Consensus of General Linear Multiagent Systems Under Directed Graphs.
IEEE Trans. Cybern., 2022
Identify diabetic retinopathy-related clinical concepts and their attributes using transformer-based natural language processing methods.
BMC Medical Informatics Decis. Mak., 2022
BigSSL: Exploring the Frontier of Large-Scale Semi-Supervised Learning for Automatic Speech Recognition.
IEEE J. Sel. Top. Signal Process., 2022
Int. J. Medical Informatics, 2022
SODA: A Natural Language Processing Package to Extract Social Determinants of Health for Cancer Studies.
CoRR, 2022
GatorTron: A Large Clinical Language Model to Unlock Patient Information from Unstructured Electronic Health Records.
CoRR, 2022
Proceedings of the IEEE International Conference on Trust, 2022
Show, Don't Tell: Demonstrations Outperform Descriptions for Schema-Guided Task-Oriented Dialogue.
Proceedings of the 2022 Conference of the North American Chapter of the Association for Computational Linguistics: Human Language Technologies, 2022
Proceedings of the Fifth Conference on Machine Learning and Systems, 2022
Training Text-To-Speech Systems From Synthetic Data: A Practical Approach For Accent Transfer Tasks.
Proceedings of the 23rd Annual Conference of the International Speech Communication Association, 2022
Proceedings of the International Conference on Machine Learning, 2022
Proceedings of the International Conference on Machine Learning, 2022
Proceedings of the Tenth International Conference on Learning Representations, 2022
Identify Cancer Patients at Risk for Heart Failure using Electronic Health Record and Genetic Data.
Proceedings of the 10th IEEE International Conference on Healthcare Informatics, 2022
A Preliminary Study of Extracting Pulmonary Nodules and Nodule Characteristics from Radiology Reports Using Natural Language Processing.
Proceedings of the 10th IEEE International Conference on Healthcare Informatics, 2022
Proceedings of the IEEE International Conference on Acoustics, 2022
Proceedings of the Thirty-Sixth AAAI Conference on Artificial Intelligence, 2022
2021
Extracting social determinants of health from electronic health records using natural language processing: a systematic review.
J. Am. Medical Informatics Assoc., 2021
Gendered linguistic structures and the innovation performance of new ventures in emerging countries: the moderating effects of digitalisation and the entrepreneurial ecosystem.
Int. J. Technol. Manag., 2021
Proceedings of the WSDM '21, 2021
Proceedings of the IEEE Spoken Language Technology Workshop, 2021
Proceedings of the 22nd Annual Conference of the International Speech Communication Association, Interspeech 2021, Brno, Czechia, August 30, 2021
Parallel Tacotron 2: A Non-Autoregressive Neural TTS Model with Differentiable Duration Modeling.
Proceedings of the 22nd Annual Conference of the International Speech Communication Association, Interspeech 2021, Brno, Czechia, August 30, 2021
Proceedings of the 9th International Conference on Learning Representations, 2021
Identify Diabetic Retinopathy-related Clinical Concepts Using Transformer-based Natural Language Processing Methods.
Proceedings of the 9th IEEE International Conference on Healthcare Informatics, 2021
Proceedings of the IEEE International Conference on Acoustics, 2021
Proceedings of the IEEE International Conference on Acoustics, 2021
Proceedings of the IEEE International Conference on Acoustics, 2021
Proceedings of the 2021 Conference on Empirical Methods in Natural Language Processing, 2021
Transformer-based named entity recognition for parsing clinical trial eligibility criteria.
Proceedings of the BCB '21: 12th ACM International Conference on Bioinformatics, 2021
w2v-BERT: Combining Contrastive Learning and Masked Language Modeling for Self-Supervised Speech Pre-Training.
Proceedings of the IEEE Automatic Speech Recognition and Understanding Workshop, 2021
Proceedings of the AMIA 2021, American Medical Informatics Association Annual Symposium, San Diego, CA, USA, October 30, 2021, 2021
Proceedings of the AMIA 2021, American Medical Informatics Association Annual Symposium, San Diego, CA, USA, October 30, 2021, 2021
A Study of Social and Behavioral Determinants of Health in Lung Cancer Patients Using Transformers-based Natural Language Processing Models.
Proceedings of the AMIA 2021, American Medical Informatics Association Annual Symposium, San Diego, CA, USA, October 30, 2021, 2021
2020
Output-based event-triggered consensus of general linear multi-agent systems with communication delay under directed graphs.
J. Frankl. Inst., 2020
J. Am. Medical Informatics Assoc., 2020
Identifying relations of medications with adverse drug events using recurrent convolutional neural networks and gradient boosting.
J. Am. Medical Informatics Assoc., 2020
Assessing the practice of data quality evaluation in a national clinical data research network through a systematic scoping review in the era of real-world data.
J. Am. Medical Informatics Assoc., 2020
Identification of important factors in an inpatient fall risk prediction model to improve the quality of care using EHR and electronic administrative data: A machine-learning approach.
Int. J. Medical Informatics, 2020
Assessing mental health signals among sexual and gender minorities using Twitter data.
Health Informatics J., 2020
CoRR, 2020
CoRR, 2020
Non-Attentive Tacotron: Robust and Controllable Neural TTS Synthesis Including Unsupervised Duration Modeling.
CoRR, 2020
A Streaming On-Device End-to-End Model Surpassing Server-Side Conventional Model Quality and Latency.
CoRR, 2020
Generating diverse and natural text-to-speech samples using a quantized fine-grained VAE and auto-regressive prosody prior.
CoRR, 2020
Proceedings of the 21st Annual Conference of the International Speech Communication Association, 2020
ContextNet: Improving Convolutional Neural Networks for Automatic Speech Recognition with Global Context.
Proceedings of the 21st Annual Conference of the International Speech Communication Association, 2020
Proceedings of the 21st Annual Conference of the International Speech Communication Association, 2020
A Natural Language Processing Tool to Extract Quantitative Smoking Status from Clinical Narratives.
Proceedings of the 8th IEEE International Conference on Healthcare Informatics, 2020
Proceedings of the 20th IEEE International Conference on Communication Technology, 2020
Proceedings of the 16th IEEE International Conference on Control & Automation, 2020
Proceedings of the 2020 IEEE International Conference on Acoustics, 2020
Proceedings of the 2020 IEEE International Conference on Acoustics, 2020
Generating Diverse and Natural Text-to-Speech Samples Using a Quantized Fine-Grained VAE and Autoregressive Prosody Prior.
Proceedings of the 2020 IEEE International Conference on Acoustics, 2020
A Streaming On-Device End-To-End Model Surpassing Server-Side Conventional Model Quality and Latency.
Proceedings of the 2020 IEEE International Conference on Acoustics, 2020
Proceedings of the 2020 IEEE International Conference on Acoustics, 2020
Proceedings of the 2020 IEEE International Conference on Acoustics, 2020
Developing and Validating a Computable Phenotype for the Identification of Transgender and Gender Nonconforming Individuals and Subgroups.
Proceedings of the AMIA 2020, 2020
Leveraging Monolingual Data with Self-Supervision for Multilingual Neural Machine Translation.
Proceedings of the 58th Annual Meeting of the Association for Computational Linguistics, 2020
2019
IEEE Trans. Cybern., 2019
A Stereo-Vision System for Measuring the Ram Speed of Steam Hammers in an Environment with a Large Field of View and Strong Vibrations.
Sensors, 2019
A study of deep learning methods for de-identification of clinical notes in cross-institute settings.
BMC Medical Informatics Decis. Mak., 2019
Applying a deep learning-based sequence labeling approach to detect attributes of medical concepts in clinical text.
BMC Medical Informatics Decis. Mak., 2019
Time-sensitive clinical concept embeddings learned from large electronic health records.
BMC Medical Informatics Decis. Mak., 2019
Massively Multilingual Neural Machine Translation in the Wild: Findings and Challenges.
CoRR, 2019
CoRR, 2019
Proceedings of the Advances in Neural Information Processing Systems 32: Annual Conference on Neural Information Processing Systems 2019, 2019
Proceedings of the 25th ACM SIGKDD International Conference on Knowledge Discovery & Data Mining, 2019
Learning to Speak Fluently in a Foreign Language: Multilingual Speech Synthesis and Cross-Language Voice Cloning.
Proceedings of the 20th Annual Conference of the International Speech Communication Association, 2019
Proceedings of the 20th Annual Conference of the International Speech Communication Association, 2019
Proceedings of the 20th Annual Conference of the International Speech Communication Association, 2019
Proceedings of the 20th Annual Conference of the International Speech Communication Association, 2019
Proceedings of the 20th Annual Conference of the International Speech Communication Association, 2019
Proceedings of the 7th International Conference on Learning Representations, 2019
A Study of Deep Learning Methods for De-identification of Clinical Notes at Cross Institute Settings.
Proceedings of the 2019 IEEE International Conference on Healthcare Informatics, 2019
Proceedings of the 2019 IEEE International Conference on Healthcare Informatics, 2019
Bytes Are All You Need: End-to-end Multilingual Speech Recognition and Synthesis with Bytes.
Proceedings of the IEEE International Conference on Acoustics, 2019
Proceedings of the IEEE International Conference on Acoustics, 2019
Disentangling Correlated Speaker and Noise for Speech Synthesis via Data Augmentation and Adversarial Factorization.
Proceedings of the IEEE International Conference on Acoustics, 2019
Proceedings of the IEEE International Conference on Acoustics, 2019
Proceedings of the IEEE Automatic Speech Recognition and Understanding Workshop, 2019
Proceedings of the IEEE Automatic Speech Recognition and Understanding Workshop, 2019
Proceedings of the 13th IEEE International Conference on ASIC, 2019
Identifying Cancer Patients at Risk for Heart Failure Using Machine Learning Methods.
Proceedings of the AMIA 2019, 2019
2018
A study of generalizability of recurrent neural network-based predictive models for heart failure onset risk using a large and heterogeneous EHR data set.
J. Biomed. Informatics, 2018
CLAMP - a toolkit for efficiently building customized clinical natural language processing pipelines.
J. Am. Medical Informatics Assoc., 2018
PIE: A prior knowledge guided integrated likelihood estimation method for bias reduction in association studies using electronic health records data.
J. Am. Medical Informatics Assoc., 2018
Extraction of BI-RADS findings from breast ultrasound reports in Chinese using deep learning approaches.
Int. J. Medical Informatics, 2018
CoRR, 2018
A Comparison of Techniques for Language Model Integration in Encoder-Decoder Speech Recognition.
Proceedings of the 2018 IEEE Spoken Language Technology Workshop, 2018
Transfer Learning from Speaker Verification to Multispeaker Text-To-Speech Synthesis.
Proceedings of the Advances in Neural Information Processing Systems 31: Annual Conference on Neural Information Processing Systems 2018, 2018
Detecting Medications and Adverse Drug Events in Clinical Notes Using Recurrent Neural Networks.
Proceedings of the 1st International Workshop on Medication and Adverse Drug Event Detection, 2018
Proceedings of the Advances in Neural Networks - ISNN 2018, 2018
Proceedings of the 19th Annual Conference of the International Speech Communication Association, 2018
Proceedings of the 19th Annual Conference of the International Speech Communication Association, 2018
Assessing Mental Health Signals Among Sexual and Gender Minorities using Twitter Data.
Proceedings of the IEEE International Conference on Healthcare Informatics Workshops, 2018
Proceedings of the 2018 IEEE International Conference on Acoustics, 2018
No Need for a Lexicon? Evaluating the Value of the Pronunciation Lexica in End-to-End Models.
Proceedings of the 2018 IEEE International Conference on Acoustics, 2018
Proceedings of the 2018 IEEE International Conference on Acoustics, 2018
Proceedings of the 2018 IEEE International Conference on Acoustics, 2018
An Analysis of Incorporating an External Language Model into a Sequence-to-Sequence Model.
Proceedings of the 2018 IEEE International Conference on Acoustics, 2018
Proceedings of the 2018 IEEE International Conference on Acoustics, 2018
CaLcs: Continuously Approximating Longest Common Subsequence for Sequence Level Optimization.
Proceedings of the 2018 Conference on Empirical Methods in Natural Language Processing, Brussels, Belgium, October 31, 2018
Proceedings of the 2018 Conference on Empirical Methods in Natural Language Processing, Brussels, Belgium, October 31, 2018
Computable Eligibility Criteria through Ontology-driven Data Access: A Case Study of Hepatitis C Virus Trials.
Proceedings of the AMIA 2018, 2018
Combine Factual Medical Knowledge and Distributed Word Representation to Improve Clinical Named Entity Recognition.
Proceedings of the AMIA 2018, 2018
Proceedings of the 56th Annual Meeting of the Association for Computational Linguistics, 2018
2017
Google's Multilingual Neural Machine Translation System: Enabling Zero-Shot Translation.
Trans. Assoc. Comput. Linguistics, 2017
A long journey to short abbreviations: developing an open-source framework for clinical abbreviation recognition and disambiguation (CARD).
J. Am. Medical Informatics Assoc., 2017
CoRR, 2017
Proceedings of the MEDINFO 2017: Precision Healthcare through Informatics, 2017
Proceedings of the 18th Annual Conference of the International Speech Communication Association, 2017
Proceedings of the 18th Annual Conference of the International Speech Communication Association, 2017
A comparative study of different methods for automatic identification of clopidogrel-induced bleedings in electronic health records.
Proceedings of the Summit on Clinical Research Informatics, 2017
Evaluating Word Embeddings from Multiple Domains for Symptom Recognition in Psychiatric Notes.
Proceedings of the AMIA 2017, 2017
Detecting Body Location Modifiers of Disorders in Clinical Texts via Sequence Labeling.
Proceedings of the AMIA 2017, 2017
Proceedings of the AMIA 2017, 2017
Proceedings of the AMIA 2017, 2017
Proceedings of the AMIA 2017, 2017
2016
Extracting genetic alteration information for personalized cancer therapy from ClinicalTrials.gov.
J. Am. Medical Informatics Assoc., 2016
Google's Neural Machine Translation System: Bridging the Gap between Human and Machine Translation.
CoRR, 2016
Chemical named entity recognition in patents by domain knowledge and unsupervised feature learning.
Database J. Biol. Databases Curation, 2016
Database J. Biol. Databases Curation, 2016
UTHealth at SemEval-2016 Task 12: an End-to-End System for Temporal Information Extraction from Clinical Notes.
Proceedings of the 10th International Workshop on Semantic Evaluation, 2016
Proceedings of the Advances in Neural Information Processing Systems 29: Annual Conference on Neural Information Processing Systems 2016, 2016
Proceedings of the AMIA 2016, 2016
An Empirical Study for Impacts of Measurement Errors on EHR based Association Studies.
Proceedings of the AMIA 2016, 2016
2015
Scattering Mechanism Extraction by a Modified Cloude-Pottier Decomposition for Dual Polarization SAR.
Remote. Sens., 2015
Deciphering Signaling Pathway Networks to Understand the Molecular Mechanisms of Metformin Action.
PLoS Comput. Biol., 2015
A comparison of conditional random fields and structured support vector machines for chemical entity recognition in biomedical literature.
J. Cheminformatics, 2015
Proceedings of the 9th International Workshop on Semantic Evaluation, 2015
Proceedings of the MEDINFO 2015: eHealth-enabled Health, 2015
Proceedings of the Workshop on Biomedical Natural Language Processing, BioNLP@IJCNLP 2015, 2015
Proceedings of the AMIA 2015, 2015
Recognizing Disjoint Clinical Concepts in Clinical Text Using Machine Learning-based Methods.
Proceedings of the AMIA 2015, 2015
Clinical Language Annotation, Modeling, and Processing Toolkit (CLAMP) - a user-centric NLP system.
Proceedings of the AMIA 2015, 2015
Proceedings of the AMIA 2015, 2015
2014
Proceedings of the 8th International Workshop on Semantic Evaluation, 2014
Proceedings of the AMIA 2014, 2014
Proceedings of the AMIA 2014, 2014
2013
PLoS Comput. Biol., 2013
Recognizing clinical entities in hospital discharge summaries using Structural Support Vector Machines with word representation features.
BMC Medical Informatics Decis. Mak., 2013
J. Am. Medical Informatics Assoc., 2013
Analyzing Differences between Chinese and English Clinical Text: A Cross-Institution Comparison of Discharge Summaries in Two Languages.
Proceedings of the MEDINFO 2013, 2013
Proceedings of the Working Notes for CLEF 2013 Conference , 2013
Recognizing and Encoding Discorder Concepts in Clinical Text using Machine Learning and Vector Space Model.
Proceedings of the Working Notes for CLEF 2013 Conference , 2013
A prototype application for real-time recognition and disambiguation of clinical abbreviations.
Proceedings of the Proceeding of the 7rd International Workshop on Data and Text Mining in Bioinformatics, 2013
Proceedings of the AMIA 2013, 2013
2012
A new clustering method for detecting rare senses of abbreviations in clinical notes.
J. Biomed. Informatics, 2012
Large-scale prediction of adverse drug reactions using chemical, biological, and phenotypic properties of drugs.
J. Am. Medical Informatics Assoc., 2012
BMC Bioinform., 2012
Ranking Gene-Drug Relationships in Biomedical Literature Using Latent Dirichlet Allocation.
Proceedings of the Biocomputing 2012: Proceedings of the Pacific Symposium, 2012
Detecting Adverse Drug Reactions Using Inpatient Medication Orders and Laboratory Tests Data.
Proceedings of the 2012 IEEE Second International Conference on Healthcare Informatics, 2012
Clinical entity recognition using structural support vector machines with rich features.
Proceedings of the ACM sixth international workshop on Data and text mining in biomedical informatics, 2012
A comparative study of current clinical natural language processing systems on handling abbreviations in discharge summaries.
Proceedings of the AMIA 2012, 2012
Proceedings of the AMIA 2012, 2012
MedEx-UIMA - An Open-Source System for Medication Information Extraction from Clinical Text.
Proceedings of the AMIA 2012, 2012
2011
IEEE ACM Trans. Comput. Biol. Bioinform., 2011
Barcoding-free BAC Pooling Enables Combinatorial Selective Sequencing of the Barley Gene Space
CoRR, 2011
2010
J. Comput., 2010
Efficient Genome-Wide TagSNP Selection Across Populations via the Linkage Disequilibrium Criterion.
J. Comput. Biol., 2010
Proceedings of the Advances in Computer Science and Information Technology, 2010
Topic based automatic news recommendation using topic model and affinity propagation.
Proceedings of the International Conference on Machine Learning and Cybernetics, 2010
2009
Proceedings of the IEEE International Conference on Systems, 2009
2008
IEEE Geosci. Remote. Sens. Lett., 2008
J. Bioinform. Comput. Biol., 2008
J. Bioinform. Comput. Biol., 2008
Proceedings of the IEEE International Conference on Systems, 2008
2007
Efficient and Accurate Construction of Genetic Linkage Maps from Noisy and Missing Genotyping Data.
Proceedings of the Algorithms in Bioinformatics, 7th International Workshop, 2007
Proceedings of the 2007 Design, Automation and Test in Europe Conference and Exposition, 2007
Proceedings of the 2007 Design, Automation and Test in Europe Conference and Exposition, 2007
2006
Proceedings of the 2006 Data Compression Conference (DCC 2006), 2006
2005
Effective statistical features for coding and non-coding DNA sequence classification for yeast, C. elegans and human.
Int. J. Bioinform. Res. Appl., 2005
2004
Selection of Statistical Features Based on Mutual Information for Classification of Human Coding and Non-coding DNA Sequences.
Proceedings of the 17th International Conference on Pattern Recognition, 2004
2000
Proceedings of the TOOLS Asia 2000: 36th International Conference on Technology of Object-Oriented Languages and Systems, Xi'an, China, 30 October, 2000