Yin Zhang

According to our database, Yin Zhang authored at least 35 papers between 2016 and 2024.

Collaborative distances:

• Dijkstra number of five.
• Erdős number of four.

2024

Predicting Protein Functions Based on Heterogeneous Graph Attention Technique.

Yingwen Zhao, Zhihao Yang, Lei Wang, Yin Zhang, Hongfei Lin, Jian Wang

IEEE J. Biomed. Health Informatics, April, 2024

2023

Improving Protein Function Prediction by Adaptively Fusing Information From Protein Sequences and Biomedical Literature.

Yingwen Zhao, Zhihao Yang, Yongkai Hong, Lei Wang, Yin Zhang, Hongfei Lin, Jian Wang

IEEE J. Biomed. Health Informatics, February, 2023

Joint Biomedical Entity and Relation Extraction with Unified Interaction Maps.

Haixin Tan, Zhihao Yang, Zeyuan Ding, Zhijun Wang, Ling Luo, Lei Wang, Yin Zhang, Wei Liu, Hongfei Lin, Jian Wang

Proceedings of the IEEE International Conference on Bioinformatics and Biomedicine, 2023

Joint Biomedical Entity and Relation Extraction Based on Triple Region Vertices.

Yuqi Liu, Zhihao Yang, Jinzhong Ning, Zhijun Wang, Ling Luo, Lei Wang, Yin Zhang, Wei Liu, Hongfei Lin, Jian Wang

Proceedings of the IEEE International Conference on Bioinformatics and Biomedicine, 2023

2022

MRC4BioER: Joint extraction of biomedical entities and relations in the machine reading comprehension framework.

Cong Sun, Zhihao Yang, Lei Wang, Yin Zhang, Hongfei Lin, Jian Wang

J. Biomed. Informatics, 2022

Adaptive Multi-view Graph Convolutional Network for Gene Ontology Annotations of Proteins.

Yingwen Zhao, Zhihao Yang, Yongkai Hong, Lei Wang, Yin Zhang, Hongfei Lin, Jian Wang

Proceedings of the IEEE International Conference on Bioinformatics and Biomedicine, 2022

BioNER-CFEM: Biomedical Named Entity Recognition Based on Character Feature Enhancement with Multimodal Method.

Jinzhong Ning, Jiru Li, Zhihao Yang, Yuanyuan Sun, Lei Wang, Yin Zhang, Hongfei Lin, Jian Wang

Proceedings of the IEEE International Conference on Bioinformatics and Biomedicine, 2022

2021

Lexicon Knowledge Boosted Interaction Graph Network for Adverse Drug Reaction Recognition From Social Media.

Zhiheng Li, Zhihao Yang, Lei Wang, Yin Zhang, Hongfei Lin, Jian Wang

IEEE J. Biomed. Health Informatics, 2021

Biomedical named entity recognition using BERT in the machine reading comprehension framework.

Cong Sun, Zhihao Yang, Lei Wang, Yin Zhang, Hongfei Lin, Jian Wang

J. Biomed. Informatics, 2021

Deep learning with language models improves named entity recognition for PharmaCoNER.

Cong Sun, Zhihao Yang, Lei Wang, Yin Zhang, Hongfei Lin, Jian Wang

BMC Bioinform., 2021

SGAT: a Self-supervised Graph Attention Network for Biomedical Relation Extraction.

Qiming Liu, Zhihao Yang, Lei Wang, Yin Zhang, Hongfei Lin, Jinzhong Ning

Proceedings of the IEEE International Conference on Bioinformatics and Biomedicine, 2021

2020

KGHC: a knowledge graph for hepatocellular carcinoma.

Nan Li, Zhihao Yang, Ling Luo, Lei Wang, Yin Zhang, Hongfei Lin, Jian Wang

BMC Medical Informatics Decis. Mak., 2020

Attention guided capsule networks for chemical-protein interaction extraction.

Cong Sun, Zhihao Yang, Lei Wang, Yin Zhang, Hongfei Lin, Jian Wang

J. Biomed. Informatics, 2020

A neural network-based joint learning approach for biomedical entity and relation extraction from biomedical literature.

Ling Luo, Zhihao Yang, Mingyu Cao, Lei Wang, Yin Zhang, Hongfei Lin

J. Biomed. Informatics, 2020

Chemical-protein interaction extraction via Gaussian probability distribution and external biomedical knowledge.

Cong Sun, Zhihao Yang, Leilei Su, Lei Wang, Yin Zhang, Hongfei Lin, Jian Wang

Bioinform., 2020

Star-BiLSTM-LAN for Document-level Mutation-Disease Relation Extraction from Biomedical Literature.

Yuan Xu, Zhihao Yang, Yawen Song, Zhiheng Li, Lei Wang, Yin Zhang, Hongfei Lin, Jian Wang

Proceedings of the IEEE International Conference on Bioinformatics and Biomedicine, 2020

Extracting biomedical relations via a multi-head attention based graph convolutional network.

Erniu Wang, Fan Wang, Zhihao Yang, Lei Wang, Yin Zhang, Hongfei Lin, Jian Wang

Proceedings of the IEEE International Conference on Bioinformatics and Biomedicine, 2020

2019

Chemical-protein interaction extraction from biomedical literature: a hierarchical recurrent convolutional neural network method.

Cong Sun, Zhihao Yang, Lei Wang, Yin Zhang, Hongfei Lin, Jian Wang, Liang Yang, Kan Xu, Yijia Zhang

Int. J. Data Min. Bioinform., 2019

KeSACNN: a protein-protein interaction article classification approach based on deep neural network.

Ling Luo, Zhihao Yang, Lei Wang, Yin Zhang, Hongfei Lin, Jian Wang

Int. J. Data Min. Bioinform., 2019

A Deep Learning Approach With Deep Contextualized Word Representations for Chemical-Protein Interaction Extraction From Biomedical Literature.

Cong Sun, Zhihao Yang, Ling Luo, Lei Wang, Yin Zhang, Hongfei Lin, Jian Wang

IEEE Access, 2019

2018

A neural network approach to chemical and gene/protein entity recognition in patents.

Ling Luo, Zhihao Yang, Pei Yang, Yin Zhang, Lei Wang, Jian Wang, Hongfei Lin

J. Cheminformatics, 2018

Identifying protein complexes based on node embeddings obtained from protein-protein interaction networks.

Xiaoxia Liu, Zhihao Yang, Shengtian Sang, Ziwei Zhou, Lei Wang, Yin Zhang, Hongfei Lin, Jian Wang, Bo Xu

BMC Bioinform., 2018

An attention-based BiLSTM-CRF approach to document-level chemical named entity recognition.

Ling Luo, Zhihao Yang, Pei Yang, Yin Zhang, Lei Wang, Hongfei Lin, Jian Wang

Bioinform., 2018

Hierarchical Recurrent Convolutional Neural Network for Chemical-protein Relation Extraction from Biomedical Literature.

Cong Sun, Zhihao Yang, Lei Wang, Yin Zhang, Hongfei Lin, Jian Wang, Liang Yang, Kan Xu, Yijia Zhang

Proceedings of the IEEE International Conference on Bioinformatics and Biomedicine, 2018

A Knowledge Graph based Bidirectional Recurrent Neural Network Method for Literature-based Discovery.

Shengtian Sang, Zhihao Yang, Xiaoxia Liu, Lei Wang, Yin Zhang, Hongfei Lin, Jian Wang, Liang Yang, Kan Xu, Yijia Zhang

Proceedings of the IEEE International Conference on Bioinformatics and Biomedicine, 2018

Protein-Protein Interaction Article Classification: A Knowledge-enriched Self-Attention Convolutional Neural Network Approach.

Ling Luo, Zhihao Yang, Lei Wang, Yin Zhang, Hongfei Lin, Jian Wang, Liang Yang, Kan Xu, Yijia Zhang

Proceedings of the IEEE International Conference on Bioinformatics and Biomedicine, 2018

PC-SENE: A node embedding based method for protein complex detection.

Xiaoxia Liu, Zhihao Yang, Shengtian Sang, Lei Wang, Yin Zhang, Hongfei Lin, Bo Xu, Yijia Zhang, Liang Yang, Kan Xu, Jian Wang

Proceedings of the IEEE International Conference on Bioinformatics and Biomedicine, 2018

HMNPPID: A Database of Protein-protein Interactions Associated with Human Malignant Neoplasms.

Qingqing Li, Zhihao Yang, Zhehuan Zhao, Ling Luo, Zhiheng Li, Lei Wang, Yin Zhang, Hongfei Lin, Jian Wang, Yijia Zhang

Proceedings of the IEEE International Conference on Bioinformatics and Biomedicine, 2018

A multi-task learning based approach to biomedical entity relation extraction.

Qingqing Li, Zhihao Yang, Ling Luo, Lei Wang, Yin Zhang, Hongfei Lin, Jian Wang, Liang Yang, Kan Xu, Yijia Zhang

Proceedings of the IEEE International Conference on Bioinformatics and Biomedicine, 2018

2017

Constructing an integrated gene similarity network for the identification of disease genes.

Zhen Tian, Maozu Guo, Chunyu Wang, Linlin Xing, Lei Wang, Yin Zhang

J. Biomed. Semant., 2017

2016

Disease-specific protein complex detection in the human protein interaction network with a supervised learning method.

Ziwei Zhou, Yingyi Gui, Zhihao Yang, Xiaoxia Liu, Lei Wang, Yin Zhang, Hongfei Lin, Jian Wang

Proceedings of the IEEE International Conference on Bioinformatics and Biomedicine, 2016

ML-CNN: A novel deep learning based disease named entity recognition architecture.

Zhehuan Zhao, Zhihao Yang, Ling Luo, Yin Zhang, Lei Wang, Hongfei Lin, Jian Wang

Proceedings of the IEEE International Conference on Bioinformatics and Biomedicine, 2016

Reconstructing gene regulatory network based on candidate auto selection method.

Linlin Xing, Maozu Guo, Xiaoyan Liu, Chun-yu Wang, Lei Wang, Yin Zhang

Proceedings of the IEEE International Conference on Bioinformatics and Biomedicine, 2016

CIDExtractor: A chemical-induced disease relation extraction system for biomedical literature.

Zhiheng Li, Zhihao Yang, Hongfei Lin, Jian Wang, Yingyi Gui, Yin Zhang, Lei Wang

Proceedings of the IEEE International Conference on Bioinformatics and Biomedicine, 2016

Epistasis detection using a permutation-based Gradient Boosting Machine.

Kai Che, Xiaoyan Liu, Maozu Guo, Junwei Zhang, Lei Wang, Yin Zhang

Proceedings of the IEEE International Conference on Bioinformatics and Biomedicine, 2016