Yi-Jia Zhang

Orcid: 0000-0002-5843-4675

Affiliations:
  • Dalian University of Technology, School of Computer Science and Technology, China


According to our database1, Yi-Jia Zhang authored at least 110 papers between 2011 and 2025.

Collaborative distances:
  • Dijkstra number2 of four.
  • Erdős number3 of four.

Timeline

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Bibliography

2025
DACG: Dual Attention and Context Guidance model for radiology report generation.
Medical Image Anal., 2025

Negative sampling strategy based on multi-hop neighbors for graph representation learning.
Expert Syst. Appl., 2025

2024
A Unified Review of Deep Learning for Automated Medical Coding.
ACM Comput. Surv., December, 2024

TransFOL: A Logical Query Model for Complex Relational Reasoning in Drug-Drug Interaction.
IEEE J. Biomed. Health Informatics, August, 2024

Multidta: drug-target binding affinity prediction via representation learning and graph convolutional neural networks.
Int. J. Mach. Learn. Cybern., July, 2024

MAFN: multi-level attention fusion network for multimodal named entity recognition.
Multim. Tools Appl., May, 2024

IMAEN: An interpretable molecular augmentation model for drug-target interaction prediction.
Expert Syst. Appl., March, 2024

Heterogeneous Graph Convolutional Network for E-Commerce Product Recommendation With Adaptive Denoising Training.
IEEE Trans. Consumer Electron., February, 2024

Aspect category sentiment analysis based on prompt-based learning with attention mechanism.
Neurocomputing, January, 2024

MPTN: A message-passing transformer network for drug repurposing from knowledge graph.
Comput. Biol. Medicine, January, 2024

A Transformer-Based Model With Self-Distillation for Multimodal Emotion Recognition in Conversations.
IEEE Trans. Multim., 2024

Temporal Protein Complex Identification Based on Dynamic Heterogeneous Protein Information Network Representation Learning.
IEEE ACM Trans. Comput. Biol. Bioinform., 2024

SADR: Self-Supervised Graph Learning With Adaptive Denoising for Drug Repositioning.
IEEE ACM Trans. Comput. Biol. Bioinform., 2024

Visual Recalibration and Gating Enhancement Network for Radiology Report Generation.
J. Comput. Biol., 2024

A meta-contrastive learning with data augmentation framework for zero-shot stance detection.
Expert Syst. Appl., 2024

A doctor's diagnosis experience enhanced transformer model for automatic diagnosis.
Eng. Appl. Artif. Intell., 2024

A dual-channel multimodal sentiment analysis framework based on three-way decision.
Eng. Appl. Artif. Intell., 2024

Comparative learning based stance agreement detection framework for multi-target stance detection.
Eng. Appl. Artif. Intell., 2024

Knowledge enhanced attention aggregation network for medicine recommendation.
Comput. Biol. Chem., 2024

Spatiotemporal constrained RNA-protein heterogeneous network for protein complex identification.
Briefings Bioinform., 2024

Humor Recognition Based on Dual Graph Attention Network with Incongruity and Ambiguity Feature Extraction.
Proceedings of the Natural Language Processing and Chinese Computing, 2024

Hybrid Attention Knowledge Fusion Network for Automated Medical Code Assignment.
Proceedings of the Bioinformatics Research and Applications - 20th International Symposium, 2024

Biomedical Relation Extraction via Domain Knowledge and Prompt Learning.
Proceedings of Joint Workshop of the 5th Extraction and Evaluation of Knowledge Entities from Scientific Documents (EEKE2024) and the 4th AI + Informetrics (AII2024) co-located with the ( iConference2024), 2024

2023
A Domain Knowledge Transformer Model for Occupation Profiling.
Int. J. Comput. Intell. Syst., December, 2023

CSDTI: an interpretable cross-attention network with GNN-based drug molecule aggregation for drug-target interaction prediction.
Appl. Intell., November, 2023

MKCL: Medical Knowledge with Contrastive Learning model for radiology report generation.
J. Biomed. Informatics, October, 2023

Protein Complex Identification Based on Heterogeneous Protein Information Network.
J. Comput. Biol., September, 2023

Extracting Mutant-Affected Protein-Protein Interactions via Gaussian-Enhanced Representation and Contrastive Learning.
J. Comput. Biol., September, 2023

Automatic International Classification of Diseases Coding via Note-Code Interaction Network with Denoising Mechanism.
J. Comput. Biol., August, 2023

ADPG: Biomedical entity recognition based on Automatic Dependency Parsing Graph.
J. Biomed. Informatics, April, 2023

DGCL: Distance-wise and Graph Contrastive Learning for medication recommendation.
J. Biomed. Informatics, March, 2023

Knowledge Guided Attention and Graph Convolutional Networks for Chemical-Disease Relation Extraction.
IEEE ACM Trans. Comput. Biol. Bioinform., 2023

Knowledge Adaptive Multi-Way Matching Network for Biomedical Named Entity Recognition via Machine Reading Comprehension.
IEEE ACM Trans. Comput. Biol. Bioinform., 2023

Self-Attention and MLP Auxiliary Convolution for Face Anti-Spoofing.
IEEE Access, 2023

DKFM: Dual Knowledge-Guided Fusion Model for Drug Recommendation.
Proceedings of the Advances in Knowledge Discovery and Data Mining, 2023

Radiology Report Generation via Visual Recalibration and Context Gating-Aware.
Proceedings of the Bioinformatics Research and Applications - 19th International Symposium, 2023

Multi-Perspective Semantic Enhanced Model for Heterogeneous Graph Embedding with Contrastive Learning.
Proceedings of the International Conference on Frontiers of Artificial Intelligence and Machine Learning, 2023

Self Question-Answering: Aspect Sentiment Triplet Extraction via a Multi-MRC Framework Based on Rethink Mechanism.
Proceedings of the Chinese Computational Linguistics - 22nd China National Conference, 2023

Adversarial Network with External Knowledge for Zero-Shot Stance Detection.
Proceedings of the Chinese Computational Linguistics - 22nd China National Conference, 2023

MKFN: Multimodal Knowledge Fusion Network for Automatic ICD Coding.
Proceedings of the IEEE International Conference on Bioinformatics and Biomedicine, 2023

Multi-Visit Interactive Recalibration Network for Drug Recommendation with a Triple Graph Encoder.
Proceedings of the IEEE International Conference on Bioinformatics and Biomedicine, 2023

2022
Helmet Wearing State Detection Based on Improved Yolov5s.
Sensors, 2022

Biomedical event trigger extraction based on multi-layer residual BiLSTM and contextualized word representations.
Int. J. Mach. Learn. Cybern., 2022

A multi-view network for real-time emotion recognition in conversations.
Knowl. Based Syst., 2022

Heterogeneous graph neural networks with denoising for graph embeddings.
Knowl. Based Syst., 2022

Dependency multi-weight-view graphs for event detection with label co-occurrence.
Inf. Sci., 2022

A supervised protein complex prediction method with network representation learning and gene ontology knowledge.
BMC Bioinform., 2022

MGEDR: A Molecular Graph Encoder for Drug Recommendation.
Proceedings of the Natural Language Processing and Chinese Computing, 2022

Heterogeneous PPI Network Representation Learning for Protein Complex Identification.
Proceedings of the Bioinformatics Research and Applications - 18th International Symposium, 2022

Gaussian-Enhanced Representation Model for Extracting Protein-Protein Interactions Affected by Mutations.
Proceedings of the Bioinformatics Research and Applications - 18th International Symposium, 2022

NIDN: Medical Code Assignment via Note-Code Interaction Denoising Network.
Proceedings of the Bioinformatics Research and Applications - 18th International Symposium, 2022

Document-Level Relation Extraction with a Dependency Syntax Transformer and Supervised Contrastive Learning.
Proceedings of the Knowledge Graph and Semantic Computing: Knowledge Graph Empowers the Digital Economy, 2022

Contrastive Self-Supervised Representation Learning for Protein Complexes Identification.
Proceedings of the IEEE International Conference on Bioinformatics and Biomedicine, 2022

Knowledge-Enhanced Dual Graph Neural Network for Robust Medicine Recommendation.
Proceedings of the IEEE International Conference on Bioinformatics and Biomedicine, 2022

Syntactic Type-aware Graph Attention Network for Drug-drug Interactions and their Adverse Effects Extraction.
Proceedings of the IEEE International Conference on Bioinformatics and Biomedicine, 2022

2021
Hierarchical matching network for multi-turn response selection in retrieval-based chatbots.
Soft Comput., 2021

Medical code prediction via capsule networks and ICD knowledge.
BMC Medical Informatics Decis. Mak., 2021

Sentence representation with manifold learning for biomedical texts.
Knowl. Based Syst., 2021

Improving biomedical word representation with locally linear embedding.
Neurocomputing, 2021

Correlation of Centralities: A Study through Distinct Graph Robustness.
IEICE Trans. Inf. Syst., 2021

JLAN: medical code prediction via joint learning attention networks and denoising mechanism.
BMC Bioinform., 2021

Biomedical cross-sentence relation extraction via multihead attention and graph convolutional networks.
Appl. Soft Comput., 2021

LDA-Transformer Model in Chinese Poetry Authorship Attribution.
Proceedings of the Information Retrieval - 27th China Conference, 2021

Aspect Fusion Graph Convolutional Networks for Aspect-Based Sentiment Analysis.
Proceedings of the Information Retrieval - 27th China Conference, 2021

A Drug Repositioning Method Based on Heterogeneous Graph Neural Network.
Proceedings of the Information Retrieval - 27th China Conference, 2021

Auto-learning Convolution-Based Graph Convolutional Network for Medical Relation Extraction.
Proceedings of the Information Retrieval - 27th China Conference, 2021

Co-Attentive Span Network with Multi-task learning for Biomedical Named Entity Recognition.
Proceedings of the IEEE International Conference on Bioinformatics and Biomedicine, 2021

2020
A Multichannel Biomedical Named Entity Recognition Model Based on Multitask Learning and Contextualized Word Representations.
Wirel. Commun. Mob. Comput., 2020

Incorporating representation learning and multihead attention to improve biomedical cross-sentence n-ary relation extraction.
BMC Bioinform., 2020

Biomedical document triage using a hierarchical attention-based capsule network.
BMC Bioinform., 2020

Hyperbolic Attributed Network Embedding with self-adaptive Random Walks.
Proceedings of the CIIS 2020: The 3rd International Conference on Computational Intelligence and Intelligent Systems, 2020

A hierarchical knowledge-aware neural network for protein-protein interaction article classification.
Proceedings of the IEEE International Conference on Bioinformatics and Biomedicine, 2020

Extracting Protein-Protein Interactions Affected by Mutations via Auxiliary Task and Domain Pre-trained Model.
Proceedings of the IEEE International Conference on Bioinformatics and Biomedicine, 2020

2019
Extracting drug-drug interactions with hybrid bidirectional gated recurrent unit and graph convolutional network.
J. Biomed. Informatics, 2019

Neural network-based approaches for biomedical relation classification: A review.
J. Biomed. Informatics, 2019

Chemical-protein interaction extraction from biomedical literature: a hierarchical recurrent convolutional neural network method.
Int. J. Data Min. Bioinform., 2019

Exploring Semi-supervised Variational Autoencoders for Biomedical Relation Extraction.
CoRR, 2019

Adverse drug reaction detection via a multihop self-attention mechanism.
BMC Bioinform., 2019

A supervised term ranking model for diversity enhanced biomedical information retrieval.
BMC Bioinform., 2019

Chemical-protein interaction extraction via contextualized word representations and multihead attention.
Database J. Biol. Databases Curation, 2019

2018
An effective neural model extracting document level chemical-induced disease relations from biomedical literature.
J. Biomed. Informatics, 2018

A hybrid model based on neural networks for biomedical relation extraction.
J. Biomed. Informatics, 2018

Protein complexes identification based on go attributed network embedding.
BMC Bioinform., 2018

Drug-drug interaction extraction via hierarchical RNNs on sequence and shortest dependency paths.
Bioinform., 2018

Protein Complexes Detection Based on Global Network Representation Learning.
Proceedings of the IEEE International Conference on Bioinformatics and Biomedicine, 2018

A Weak Supervised Learning Method for Essential Protein Detection Based on STRING Database and Learning Representation.
Proceedings of the IEEE International Conference on Bioinformatics and Biomedicine, 2018

Hierarchical Recurrent Convolutional Neural Network for Chemical-protein Relation Extraction from Biomedical Literature.
Proceedings of the IEEE International Conference on Bioinformatics and Biomedicine, 2018

A Knowledge Graph based Bidirectional Recurrent Neural Network Method for Literature-based Discovery.
Proceedings of the IEEE International Conference on Bioinformatics and Biomedicine, 2018

Protein-Protein Interaction Article Classification: A Knowledge-enriched Self-Attention Convolutional Neural Network Approach.
Proceedings of the IEEE International Conference on Bioinformatics and Biomedicine, 2018

PC-SENE: A node embedding based method for protein complex detection.
Proceedings of the IEEE International Conference on Bioinformatics and Biomedicine, 2018

HMNPPID: A Database of Protein-protein Interactions Associated with Human Malignant Neoplasms.
Proceedings of the IEEE International Conference on Bioinformatics and Biomedicine, 2018

A multi-task learning based approach to biomedical entity relation extraction.
Proceedings of the IEEE International Conference on Bioinformatics and Biomedicine, 2018

Improve Diversity-oriented Biomedical Information Retrieval using Supervised Query Expansion.
Proceedings of the IEEE International Conference on Bioinformatics and Biomedicine, 2018

2017
The Structural Vulnerability Analysis of Power Grids Based on Second-Order Centrality.
IEICE Trans. Fundam. Electron. Commun. Comput. Sci., 2017

An attention-based effective neural model for drug-drug interactions extraction.
BMC Bioinform., 2017

2016
A graph kernel based on context vectors for extracting drug-drug interactions.
J. Biomed. Informatics, 2016

The Controllability of Power Grids in Comparison with Classical Complex Network Models.
IEICE Trans. Inf. Syst., 2016

The Structural Vulnerability Analysis of Power Grids Based on Overall Information Centrality.
IEICE Trans. Inf. Syst., 2016

A method for predicting protein complex in dynamic PPI networks.
BMC Bioinform., 2016

Construction of dynamic probabilistic protein interaction networks for protein complex identification.
BMC Bioinform., 2016

2015
Integrating experimental and literature protein-protein interaction data for protein complex prediction.
BMC Genom., 2015

A Method of the Detection of Frequency-Hopping Signal Based on Channelized Receiver in the Complicated Electromagnetic Environment.
Proceedings of the 2015 International Conference on Intelligent Information Hiding and Multimedia Signal Processing, 2015

Application of Dichotomy to Network Partition Based on Sub Network Exchange Gain.
Proceedings of the 2015 International Conference on Intelligent Information Hiding and Multimedia Signal Processing, 2015

A Security Protocol Applied to Covert Communication Platform and Its Formal Analysis.
Proceedings of the 39th Annual Computer Software and Applications Conference, 2015

Biomedical event trigger detection by dependency-based word embedding.
Proceedings of the 2015 IEEE International Conference on Bioinformatics and Biomedicine, 2015

2013
Protein Complex Prediction in Large Ontology Attributed Protein-Protein Interaction Networks.
IEEE ACM Trans. Comput. Biol. Bioinform., 2013

Integrating multiple biomedical resources for protein complex prediction.
Proceedings of the 2013 IEEE International Conference on Bioinformatics and Biomedicine, 2013

2012
Hash Subgraph Pairwise Kernel for Protein-Protein Interaction Extraction.
IEEE ACM Trans. Comput. Biol. Bioinform., 2012

2011
Neighborhood hash graph kernel for protein-protein interaction extraction.
J. Biomed. Informatics, 2011

Identifying Protein Complexes from PPI Networks Using GO Semantic Similarity.
Proceedings of the IEEE International Conference on Bioinformatics and Biomedicine, 2011


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