Yadong Wang
Orcid: 0000-0001-6500-6217Affiliations:
- Harbin Institute of Technology, Harbin, Heilongjiang, China
According to our database1,
Yadong Wang
authored at least 115 papers
between 2005 and 2024.
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Bibliography
2024
BMC Bioinform., March, 2024
Database J. Biol. Databases Curation, January, 2024
Special Issue on Methods and Applications for Large-Scale Intelligent Transportation Systems [Guest Editorial].
IEEE Intell. Transp. Syst. Mag., 2024
SCancerRNA: Expression at the Single-cell Level and Interaction Resource of Non-coding RNA Biomarkers for Cancers.
Genom. Proteom. Bioinform., 2024
miniSNV: accurate and fast single nucleotide variant calling from nanopore sequencing data.
Briefings Bioinform., 2024
2023
Predicting Drug-Disease Associations Through Similarity Network Fusion and Multi-View Feature Projection Representation.
IEEE J. Biomed. Health Informatics, October, 2023
Struct2GO: protein function prediction based on graph pooling algorithm and AlphaFold2 structure information.
Bioinform., October, 2023
ACM Trans. Multim. Comput. Commun. Appl., 2023
IEEE ACM Trans. Comput. Biol. Bioinform., 2023
PSPGO: Cross-Species Heterogeneous Network Propagation for Protein Function Prediction.
IEEE ACM Trans. Comput. Biol. Bioinform., 2023
IEEE ACM Trans. Comput. Biol. Bioinform., 2023
Identification of risk genes and biological pathways influencing myopia via transcriptome association study and biomedical ontology methods.
Proceedings of the IEEE International Conference on Bioinformatics and Biomedicine, 2023
Comprehensive evaluation of RNA-seq alignment methods based on long-read sequencing data.
Proceedings of the IEEE International Conference on Bioinformatics and Biomedicine, 2023
2022
IEEE ACM Trans. Comput. Biol. Bioinform., 2022
IEEE ACM Trans. Comput. Biol. Bioinform., 2022
Comput. Biol. Chem., 2022
Prediction of the disease causal genes based on heterogeneous network and multi-feature combination method.
Comput. Biol. Chem., 2022
BMC Bioinform., 2022
Evaluation of classification in single cell atac-seq data with machine learning methods.
BMC Bioinform., 2022
Correction to: Enhancing discoveries of molecular QTL studies with small sample size using summary statistic imputation.
Briefings Bioinform., 2022
Enhancing discoveries of molecular QTL studies with small sample size using summary statistic imputation.
Briefings Bioinform., 2022
NSAP: A Neighborhood Subgraph Aggregation Method for Drug-Disease Association Prediction.
Proceedings of the Intelligent Computing Theories and Application, 2022
Comparison of the Nanopore and PacBio sequencing technologies for DNA 5-methylcytosine detection.
Proceedings of the IEEE International Conference on Bioinformatics and Biomedicine, 2022
2021
WMMDCA: Prediction of Drug Responses by Weight-Based Modular Mapping in Cancer Cell Lines.
IEEE ACM Trans. Comput. Biol. Bioinform., 2021
IEEE ACM Trans. Comput. Biol. Bioinform., 2021
ScGSLC: An unsupervised graph similarity learning framework for single-cell RNA-seq data clustering.
Comput. Biol. Chem., 2021
A pipeline for RNA-seq based eQTL analysis with automated quality control procedures.
BMC Bioinform., 2021
BMC Bioinform., 2021
Long-read sequencing settings for efficient structural variation detection based on comprehensive evaluation.
BMC Bioinform., 2021
Factor graph-aggregated heterogeneous network embedding for disease-gene association prediction.
BMC Bioinform., 2021
SKSV: ultrafast structural variation detection from circular consensus sequencing reads.
Bioinform., 2021
Erratum to: abPOA: an SIMD-based C library for fast partial order alignment using adaptive band.
Bioinform., 2021
Bioinform., 2021
An integrated approach for copy number variation discovery in parent-offspring trios.
Briefings Bioinform., 2021
A deep learning approach for filtering structural variants in short read sequencing data.
Briefings Bioinform., 2021
Proceedings of the Intelligent Computing Theories and Application, 2021
PocaCNV: A Tool to Detect Copy Number Variants from Population-Scale Genome Sequencing Data.
Proceedings of the IEEE International Conference on Bioinformatics and Biomedicine, 2021
Differentially Expressed Mutant Genes Reveal Potential Prognostic Markers For Lung Adenocarcinoma.
Proceedings of the IEEE International Conference on Bioinformatics and Biomedicine, 2021
2020
IEEE ACM Trans. Comput. Biol. Bioinform., 2020
Prognostic prediction of carcinoma by a differential-regulatory-network-embedded deep neural network.
Comput. Biol. Chem., 2020
HGAlinker: Drug-Disease Association Prediction Based on Attention Mechanism of Heterogeneous Graph.
Proceedings of the Intelligent Computing Theories and Application, 2020
Proceedings of the 2020 Design, Automation & Test in Europe Conference & Exhibition, 2020
Proceedings of the IEEE International Conference on Bioinformatics and Biomedicine, 2020
Proceedings of the IEEE International Conference on Bioinformatics and Biomedicine, 2020
2019
BMC Medical Informatics Decis. Mak., 2019
Simulating genetically heterozygous genomes in the tumour tissue according to its clonal evolution history.
Int. J. Comput. Biol. Drug Des., 2019
LncDisAP: a computation model for LncRNA-disease association prediction based on multiple biological datasets.
BMC Bioinform., 2019
Prioritizing candidate diseases-related metabolites based on literature and functional similarity.
BMC Bioinform., 2019
BMC Bioinform., 2019
Joint detection of germline and somatic copy number events in matched tumor-normal sample pairs.
Bioinform., 2019
Bioinform., 2019
TideHunter: efficient and sensitive tandem repeat detection from noisy long-reads using seed-and-chain.
Bioinform., 2019
Proceedings of the Intelligent Computing Theories and Application, 2019
Proceedings of the 2019 IEEE International Conference on Bioinformatics and Biomedicine, 2019
A Bidirectional Fuzzy Index and Approximate Search Algorithm for Next Generation Sequencing.
Proceedings of the 2019 IEEE International Conference on Bioinformatics and Biomedicine, 2019
Proceedings of the 2019 IEEE International Conference on Bioinformatics and Biomedicine, 2019
Proceedings of the 2019 IEEE International Conference on Bioinformatics and Biomedicine, 2019
Y-SPCR: A new dimensionality reduction method for gene expression data classification.
Proceedings of the 2019 IEEE International Conference on Bioinformatics and Biomedicine, 2019
2018
Modeling and correct the GC bias of tumor and normal WGS data for SCNA based tumor subclonal population inferring.
BMC Bioinform., 2018
Identifying Representative Network Motifs for Inferring Higher-order Structure of Biological Networks.
Proceedings of the IEEE International Conference on Bioinformatics and Biomedicine, 2018
Proceedings of the IEEE International Conference on Bioinformatics and Biomedicine, 2018
DeepDNA: a hybrid convolutional and recurrent neural network for compressing human mitochondrial genomes.
Proceedings of the IEEE International Conference on Bioinformatics and Biomedicine, 2018
Proceedings of the IEEE International Conference on Bioinformatics and Biomedicine, 2018
deSPI: efficient classification of metagenomics reads with lightweight de Bruijn graph-based reference indexing.
Proceedings of the IEEE International Conference on Bioinformatics and Biomedicine, 2018
Proceedings of the IEEE International Conference on Bioinformatics and Biomedicine, 2018
Proceedings of the IEEE International Conference on Bioinformatics and Biomedicine, 2018
2017
WDNfinder: A method for minimum driver node set detection and analysis in directed and weighted biological network.
J. Bioinform. Comput. Biol., 2017
Int. J. Data Min. Bioinform., 2017
Int. J. Data Min. Bioinform., 2017
DTWscore: differential expression and cell clustering analysis for time-series single-cell RNA-seq data.
BMC Bioinform., 2017
BMC Bioinform., 2017
J. Biomed. Semant., 2017
rMFilter: acceleration of long read-based structure variation calling by chimeric read filtering.
Bioinform., 2017
Proceedings of the 2017 IEEE International Conference on Computer Design, 2017
Pysubsim-tree: A package for simulating tumor genomes according to tumor evolution history.
Proceedings of the 2017 IEEE International Conference on Bioinformatics and Biomedicine, 2017
Pre-SCNAClonal: Efficient GC bias correction for SCNA based tumor subclonal populations inferring.
Proceedings of the 2017 IEEE International Conference on Bioinformatics and Biomedicine, 2017
2016
Comparison among dimensionality reduction techniques based on Random Projection for cancer classification.
Comput. Biol. Chem., 2016
BMC Bioinform., 2016
deBWT: parallel construction of Burrows-Wheeler Transform for large collection of genomes with de Bruijn-branch encoding.
Bioinform., 2016
Bioinform., 2016
Bioinform., 2016
Proceedings of the IEEE International Conference on Bioinformatics and Biomedicine, 2016
ERDS-pe: A paired hidden Markov model for copy number variant detection from whole-exome sequencing data.
Proceedings of the IEEE International Conference on Bioinformatics and Biomedicine, 2016
Proceedings of the IEEE International Conference on Bioinformatics and Biomedicine, 2016
2015
IEEE ACM Trans. Comput. Biol. Bioinform., 2015
Using Semantic Association to Extend and Infer Literature-Oriented Relativity Between Terms.
IEEE ACM Trans. Comput. Biol. Bioinform., 2015
LncRNA2Target: a database for differentially expressed genes after lncRNA knockdown or overexpression.
Nucleic Acids Res., 2015
misFinder: identify mis-assemblies in an unbiased manner using reference and paired-end reads.
BMC Bioinform., 2015
BMC Bioinform., 2015
Measuring semantic similarities by combining gene ontology annotations and gene co-function networks.
BMC Bioinform., 2015
Bioinform., 2015
A web tool for measuring gene semantic similarities by combining gene ontology and gene co-function networks.
Proceedings of the 6th ACM Conference on Bioinformatics, 2015
2014
Nucleic Acids Res., 2014
BMC Syst. Biol., 2014
A gradient-boosting approach for filtering <i>de novo</i> mutations in parent-offspring trios.
Bioinform., 2014
2013
Identifying cross-category relations in gene ontology and constructing genome-specific term association networks.
BMC Bioinform., 2013
PERGA: A Paired-End Read Guided De Novo Assembler for Extending Contigs Using SVM Approach.
Proceedings of the ACM Conference on Bioinformatics, 2013
2012
Bioinform., 2012
PRISM: Pair-read informed split-read mapping for base-pair level detection of insertion, deletion and structural variants.
Bioinform., 2012
2011
A modulated empirical Bayes model for identifying topological and temporal estrogen receptor α regulatory networks in breast cancer.
BMC Syst. Biol., 2011
Proceedings of the 2011 IEEE International Workshop on Genomic Signal Processing and Statistics, 2011
2010
BMC Syst. Biol., 2010
Proceedings of the 5th International Workshop on Ontology Matching (OM-2010), 2010
2009
Nucleic Acids Res., 2009
Proceedings of the Artificial Intelligence and Computational Intelligence, 2009
2008
Constructing disease-specific gene networks using pair-wise relevance metric: Application to colon cancer identifies interleukin 8, desmin and enolase 1 as the central elements.
BMC Syst. Biol., 2008
2005
A Novel Feature Ensemble Technology to Improve Prediction Performance of Multiple Heterogeneous Phenotypes Based on Microarray Data.
Proceedings of the Fuzzy Systems and Knowledge Discovery, Second International Conference, 2005