Xiuzhen Huang

According to our database, Xiuzhen Huang authored at least 49 papers between 2004 and 2024.

Collaborative distances:

• Dijkstra number of four.
• Erdős number of three.

2024

Advancing LGBTQ+ inclusion in STEM education and AI research.

Emily Wong, Ryan J. Urbanowicz, Tiffani J. Bright, Nicholas P. Tatonetti, Yi-Wen Hsiao, Xiuzhen Huang, Jason H. Moore, Pei-Chen Peng

Patterns, 2024

2022

Editorial.

Xiuzhen Huang, Yu Zhang, Xuan Guo

IEEE ACM Trans. Comput. Biol. Bioinform., 2022

An Ensemble of U-Net Models for Kidney Tumor Segmentation With CT Images.

Jason L. Causey, Jonathan Stubblefield, Jake A. Qualls, Jennifer Fowler, Lingrui Cai, Karl Walker, Yuanfang Guan, Xiuzhen Huang

IEEE ACM Trans. Comput. Biol. Bioinform., 2022

Spatial Pyramid Pooling With 3D Convolution Improves Lung Cancer Detection.

Jason L. Causey, Keyu Li, Xianghao Chen, Wei Dong, Karl Walker, Jake A. Qualls, Jonathan Stubblefield, Jason H. Moore, Yuanfang Guan, Xiuzhen Huang

IEEE ACM Trans. Comput. Biol. Bioinform., 2022

CrossCas: A Novel Cross-Platform Approach for Predicting Cascades in Online Social Networks with Hidden Markov Model.

Jinwei Liu, Xiaonan Zhang, Richard A. Aló, Xiuzhen Huang, Long Cheng, Feng Deng

Proceedings of the IEEE Global Communications Conference, 2022

Team building without boundaries.

Andy D. Perkins, Joan Peckham, Tayo Obafemi-Ajayi, Xiuzhen Huang

Proceedings of the BCB '22: 13th ACM International Conference on Bioinformatics, Computational Biology and Health Informatics, Northbrook, Illinois, USA, August 7, 2022

NBT (no-boundary thinking): needed to attend to ethical implications of data and AI.

Joan Peckham, Andy D. Perkins, Tayo Obafemi-Ajayi, Xiuzhen Huang

Proceedings of the BCB '22: 13th ACM International Conference on Bioinformatics, Computational Biology and Health Informatics, Northbrook, Illinois, USA, August 7, 2022

2021

Identify differentially expressed genes with large background samples.

Jennifer Fowler, Jonathan Stubblefield, Jason L. Causey, Jake A. Qualls, Wei Dong, Hongmei Jiang, Karl Walker, Yuanfang Guan, Xiuzhen Huang

Int. J. Comput. Biol. Drug Des., 2021

2020

Detecting Asymmetric Patterns and Localizing Cancers on Mammograms.

Yuanfang Guan, Xueqing Wang, Hongyang Li, Zhenning Zhang, Xianghao Chen, Omer Siddiqui, Sara Nehring, Xiuzhen Huang

Patterns, 2020

2019

Lung cancer screening with low-dose CT scans using a deep learning approach.

Jason L. Causey, Yuanfang Guan, Wei Dong, Karl Walker, Jake A. Qualls, Fred W. Prior, Xiuzhen Huang

CoRR, 2019

2018

Highly accurate model for prediction of lung nodule malignancy with CT scans.

Jason L. Causey, Junyu Zhang, Shiqian Ma, Bo Jiang, Jake A. Qualls, David G. Politte, Fred W. Prior, Shuzhong Zhang, Xiuzhen Huang

CoRR, 2018

EBIC: an artificial intelligence-based parallel biclustering algorithm for pattern discovery.

Patryk Orzechowski, Moshe Sipper, Xiuzhen Huang, Jason H. Moore

CoRR, 2018

EBIC: an evolutionary-based parallel biclustering algorithm for pattern discovery.

Patryk Orzechowski, Moshe Sipper, Xiuzhen Huang, Jason H. Moore

Bioinform., 2018

runibic: a Bioconductor package for parallel row-based biclustering of gene expression data.

Patryk Orzechowski, Artur Panszczyk, Xiuzhen Huang, Jason H. Moore

Bioinform., 2018

EBIC: a next-generation evolutionary-based parallel biclustering method.

Patryk Orzechowski, Moshe Sipper, Xiuzhen Huang, Jason H. Moore

Proceedings of the Genetic and Evolutionary Computation Conference Companion, 2018

2017

Novel Low Cost 3D Surface Model Reconstruction System for Plant Phenotyping.

Suxing Liu, Lucia M. Acosta-Gamboa, Xiuzhen Huang, Argelia Lorence

J. Imaging, 2017

No-Boundary Thinking in Bioinformatics.

Jason H. Moore, Steven F. Jennings, Casey S. Greene, Lawrence E. Hunter, Andy D. Perkins, ClarLynda R. Williams-DeVane, Donald C. Wunsch, Zhongming Zhao, Xiuzhen Huang

Proceedings of the Biocomputing 2017: Proceedings of the Pacific Symposium, 2017

2016

BinPacker: Packing-Based <i>De Novo</i> Transcriptome Assembly from RNA-seq Data.

Juntao Liu, Guojun Li, Zheng Chang, Ting Yu, Bingqiang Liu, Rick McMullen, Pengyin Chen, Xiuzhen Huang

PLoS Comput. Biol., 2016

Tensor models: solution methods and applications.

Shiqian Ma, Bo Jiang, Xiuzhen Huang, Shuzhong Zhang

Proceedings of the Big Data over Networks, 2016

2015

Big data - a 21st century science Maginot Line? No-boundary thinking: shifting from the big data paradigm.

Xiuzhen Huang, Steven F. Jennings, Barry Bruce, Alison Buchan, Liming Cai, Pengyin Chen, Carole L. Cramer, Weihua Guan, Uwe Hilgert, Hongmei Jiang, Zenglu Li, Gail McClure, Donald F. McMullen, Bindu Nanduri, Andy D. Perkins, Bhanu Rekepalli, Saeed Salem, Jennifer Specker, Karl Walker, Donald C. Wunsch, Donghai Xiong, Shuzhong Zhang, Yu Zhang, Zhongming Zhao, Jason H. Moore

BioData Min., 2015

2014

Stochastic k-Tree Grammar and Its Application in Biomolecular Structure Modeling.

Liang Ding, Abdul Samad, Xingran Xue, Xiuzhen Huang, Russell L. Malmberg, Liming Cai

Proceedings of the Language and Automata Theory and Applications, 2014

2013

Polynomial kernels collapse the W-hierarchy.

Liang Ding, Abdul Samad, Xingran Xue, Xiuzhen Huang, Liming Cai

CoRR, 2013

No-boundary thinking in bioinformatics research.

Xiuzhen Huang, Barry Bruce, Alison Buchan, Clare Bates Congdon, Carole L. Cramer, Steven F. Jennings, Hongmei Jiang, Zenglu Li, Gail McClure, Rick McMullen, Jason H. Moore, Bindu Nanduri, Joan Peckham, Andy D. Perkins, Shawn W. Polson, Bhanu Rekepalli, Saeed Salem, Jennifer Specker, Donald C. Wunsch, Donghai Xiong, Shuzhong Zhang, Zhongming Zhao

BioData Min., 2013

2012

A Unified Adaptive Co-identification Framework for High-D Expression Data.

Shuzhong Zhang, Kun Wang, Cody Ashby, Bilian Chen, Xiuzhen Huang

Proceedings of the Pattern Recognition in Bioinformatics, 2012

Study of Protein Structure Alignment Problem in Parameterized Computation.

Cody Ashby, Kun Wang, Carole L. Cramer, Xiuzhen Huang

Proceedings of the BIOINFORMATICS 2012 - Proceedings of the International Conference on Bioinformatics Models, Methods and Algorithms, Vilamoura, Algarve, Portugal, 1, 2012

2011

A New Framework for Co-clustering of Gene Expression Data.

Shuzhong Zhang, Kun Wang, Bilian Chen, Xiuzhen Huang

Proceedings of the Pattern Recognition in Bioinformatics, 2011

Graph-based approach for gene markers and applications in next-generation sequencing data analysis.

Daniel Johnson, Kun Wang, Carole L. Cramer, Xiuzhen Huang

Proceedings of the ACM International Conference on Bioinformatics, 2011

2010

Fixed-Parameter Approximation: Conceptual Framework and Approximability Results.

Liming Cai, Xiuzhen Huang

Algorithmica, 2010

Analyzing genetic factors involved in recombinant protein expression enhancement.

Daniel Johnson, Keat Teoh, Cody Ashby, Elizabeth Hood, Xiuzhen Huang

Proceedings of the 2010 IEEE International Conference on Bioinformatics and Biomedicine Workshops, 2010

2008

Parameterized Complexity and Biopolymer Sequence Comparison.

Liming Cai, Xiuzhen Huang, Chunmei Liu, Frances A. Rosamond, Yinglei Song

Comput. J., 2008

A practical comparison of two K-Means clustering algorithms.

Gregory A. Wilkin, Xiuzhen Huang

BMC Bioinform., 2008

Addressing Bio-sequence and Bio-structure Problems.

Xiuzhen Huang

Proceedings of the International Multisymposiums on Computer and Computational Sciences, 2008

A Relational Approach for Pathway Analysis.

Cody Ashby, Xiuzhen Huang, Jeff Jenness, Joseph Kerby

Proceedings of the International Multisymposiums on Computer and Computational Sciences, 2008

2007

Polynomial time approximation schemes and parameterized complexity.

Jianer Chen, Xiuzhen Huang, Iyad A. Kanj, Ge Xia

Discret. Appl. Math., 2007

K-Means Clustering Algorithms: Implementation and Comparison.

Gregory A. Wilkin, Xiuzhen Huang

Proceedings of the Proceeding of the Second International Multi-Symposium of Computer and Computational Sciences (IMSCCS 2007), 2007

Parameterized Graph Problems in Computational Biology.

Xiuzhen Huang, Jing Lai

Proceedings of the Proceeding of the Second International Multi-Symposium of Computer and Computational Sciences (IMSCCS 2007), 2007

2006

Efficient Parameterized Algorithms for Biopolymer Structure-Sequence Alignment.

Yinglei Song, Chunmei Liu, Xiuzhen Huang, Russell L. Malmberg, Ying Xu, Liming Cai

IEEE ACM Trans. Comput. Biol. Bioinform., 2006

Strong computational lower bounds via parameterized complexity.

Jianer Chen, Xiuzhen Huang, Iyad A. Kanj, Ge Xia

J. Comput. Syst. Sci., 2006

On the computational hardness based on linear FPT-reductions.

Jianer Chen, Xiuzhen Huang, Iyad A. Kanj, Ge Xia

J. Comb. Optim., 2006

Maximum common subgraph: some upper bound and lower bound results.

Xiuzhen Huang, Jing Lai, Steven F. Jennings

BMC Bioinform., 2006

Maximum Common Subgraph: Upper Bound and Lower Bound Results.

Xiuzhen Huang, Jing Lai

Proceedings of the Interdisciplinary and Multidisciplinary Research in Computer Science, 2006

On PTAS for Planar Graph Problems.

Xiuzhen Huang, Jianer Chen

Proceedings of the Fourth IFIP International Conference on Theoretical Computer Science (TCS 2006), 2006

Negative-Weight Cycle Algorithms.

Xiuzhen Huang

Proceedings of the 2006 International Conference on Foundations of Computer Science, 2006

Lower Bounds and Parameterized Approach for Longest Common Subsequence.

Xiuzhen Huang

Proceedings of the Computing and Combinatorics, 12th Annual International Conference, 2006

Parameterized Computation of LCS for Two Sequences.

Yuan Lin, Jeff Jenness, Xiuzhen Huang

Proceedings of the 2006 International Conference on Bioinformatics & Computational Biology, 2006

2005

Tight lower bounds for certain parameterized NP-hard problems.

Jianer Chen, Benny Chor, Mike Fellows, Xiuzhen Huang, David W. Juedes, Iyad A. Kanj, Ge Xia

Inf. Comput., 2005

Efficient Parameterized Algorithm for Biopolymer Structure-Sequence Alignment.

Yinglei Song, Chunmei Liu, Xiuzhen Huang, Russell L. Malmberg, Ying Xu, Liming Cai

Proceedings of the Algorithms in Bioinformatics, 5th International Workshop, 2005

<i>W</i>-Hardness Under Linear FPT-Reductions: Structural Properties and Further Applications.

Jianer Chen, Xiuzhen Huang, Iyad A. Kanj, Ge Xia

Proceedings of the Computing and Combinatorics, 11th Annual International Conference, 2005

2004

Linear FPT reductions and computational lower bounds.

Jianer Chen, Xiuzhen Huang, Iyad A. Kanj, Ge Xia

Proceedings of the 36th Annual ACM Symposium on Theory of Computing, 2004