Xin He

Affiliations:
  • University of California, San Francisco, Department of Biochemistry and Biophysics, CA, USA
  • University of Illinois Urbana-Champaign, Department of Computer Science, IL, USA (PhD 2009)


According to our database1, Xin He authored at least 14 papers between 2005 and 2011.

Collaborative distances:
  • Dijkstra number2 of four.
  • Erdős number3 of four.

Timeline

Legend:

Book 
In proceedings 
Article 
PhD thesis 
Dataset
Other 

Links

On csauthors.net:

Bibliography

2011
BeeSpace Navigator: exploratory analysis of gene function using semantic indexing of biological literature.
Nucleic Acids Res., 2011

2010
Thermodynamics-Based Models of Transcriptional Regulation by Enhancers: The Roles of Synergistic Activation, Cooperative Binding and Short-Range Repression.
PLoS Comput. Biol., 2010

BSQA: integrated text mining using entity relation semantics extracted from biological literature of insects.
Nucleic Acids Res., 2010

Identifying overrepresented concepts in gene lists from literature: a statistical approach based on Poisson mixture model.
BMC Bioinform., 2010

2009
Computational Models of Function and Evolution of cis-Regulatory Sequences
PhD thesis, 2009

Alignment and Prediction of <i>cis</i>-Regulatory Modules Based on a Probabilistic Model of Evolution.
PLoS Comput. Biol., 2009

Detecting gene clusters under evolutionary constraint in a large number of genomes.
Bioinform., 2009

2008
Efficiently Identifying Max-Gap Clusters in Pairwise Genome Comparison.
J. Comput. Biol., 2008

2007
MORPH: Probabilistic Alignment Combined with Hidden Markov Models of <i>cis</i>-Regulatory Modules.
PLoS Comput. Biol., 2007

Generating gene summaries from biomedical literature: A study of semi-structured summarization.
Inf. Process. Manag., 2007

Language Models for Genomics Information Retrieval: UIUC at TREC 2007 Genomics Track.
Proceedings of The Sixteenth Text REtrieval Conference, 2007

2006
Robust Pseudo Feedback Estimation and HMM Passage Extraction: UIUC at TREC 2006 Genomics Track.
Proceedings of the Fifteenth Text REtrieval Conference, 2006

Automatically Generating Gene Summaries from Biomedical Literature.
Proceedings of the Biocomputing 2006, 2006

2005
UIUC/MUSC at TREC 2005 Genomics Track.
Proceedings of the Fourteenth Text REtrieval Conference, 2005


  Loading...