Xiaoqian Jiang

Orcid: 0000-0001-9933-2205

According to our database1, Xiaoqian Jiang authored at least 243 papers between 2005 and 2024.

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Bibliography

2024
Exploring the tradeoff between data privacy and utility with a clinical data analysis use case.
BMC Medical Informatics Decis. Mak., December, 2024

SAFER: sub-hypergraph attention-based neural network for predicting effective responses to dose combinations.
BMC Bioinform., December, 2024

A transformer-based deep learning approach for fairly predicting post-liver transplant risk factors.
J. Biomed. Informatics, January, 2024

FedGMMAT: Federated generalized linear mixed model association tests.
PLoS Comput. Biol., 2024

CancerGPT for few shot drug pair synergy prediction using large pretrained language models.
npj Digit. Medicine, 2024

Clinical outcome-guided deep temporal clustering for disease progression subtyping.
J. Biomed. Informatics, 2024

SPeC: A Soft Prompt-Based Calibration on Performance Variability of Large Language Model in Clinical Notes Summarization.
J. Biomed. Informatics, 2024

Ensemble pretrained language models to extract biomedical knowledge from literature.
J. Am. Medical Informatics Assoc., 2024

Improving large language models for clinical named entity recognition via prompt engineering.
J. Am. Medical Informatics Assoc., 2024

Stratifying heart failure patients with graph neural network and transformer using Electronic Health Records to optimize drug response prediction.
J. Am. Medical Informatics Assoc., 2024

THOR: Secure Transformer Inference with Homomorphic Encryption.
IACR Cryptol. ePrint Arch., 2024

Label noise correction for crowdsourcing using dynamic resampling.
Eng. Appl. Artif. Intell., 2024

Artificial Intelligence in Extracting Diagnostic Data from Dental Records.
CoRR, 2024

Robust Privacy Amidst Innovation with Large Language Models Through a Critical Assessment of the Risks.
CoRR, 2024

Heterogeneous Graph Contrastive Learning with Spectral Augmentation.
CoRR, 2024

MALLM-GAN: Multi-Agent Large Language Model as Generative Adversarial Network for Synthesizing Tabular Data.
CoRR, 2024

GENEVIC: GENetic data Exploration and Visualization via Intelligent interactive Console.
CoRR, 2024

De-identification is not always enough.
CoRR, 2024

Timeliness-Selective Incentive Federated Crowdsourcing.
Proceedings of the IEEE International Conference on Web Services, 2024

Mapping Study Variables to Common Data Elements Using GPT for Sheets: Towards Standardized Data Collection and Sharing.
Proceedings of the 12th IEEE International Conference on Healthcare Informatics, 2024

2023
Confidence-based laboratory test reduction recommendation algorithm.
BMC Medical Informatics Decis. Mak., December, 2023

Non-invasive arterial blood pressure measurement and SpO<sub>2</sub> estimation using PPG signal: a deep learning framework.
BMC Medical Informatics Decis. Mak., December, 2023

Privacy-preserving federated genome-wide association studies via dynamic sampling.
Bioinform., October, 2023

Using artificial intelligence to learn optimal regimen plan for Alzheimer's disease.
J. Am. Medical Informatics Assoc., September, 2023

Systematic design and data-driven evaluation of social determinants of health ontology (SDoHO).
J. Am. Medical Informatics Assoc., August, 2023

A hierarchical strategy to minimize privacy risk when linking "De-identified" data in biomedical research consortia.
J. Biomed. Informatics, March, 2023

Mining for equitable health: Assessing the impact of missing data in electronic health records.
J. Biomed. Informatics, March, 2023

AD-Syn-Net: systematic identification of Alzheimer's disease-associated mutation and co-mutation vulnerabilities via deep learning.
Briefings Bioinform., March, 2023

Emulate randomized clinical trials using heterogeneous treatment effect estimation for personalized treatments: Methodology review and benchmark.
J. Biomed. Informatics, January, 2023

Multi-task learning with dynamic re-weighting to achieve fairness in healthcare predictive modeling.
J. Biomed. Informatics, 2023

Blockchain-enabled immutable, distributed, and highly available clinical research activity logging system for federated COVID-19 data analysis from multiple institutions.
J. Am. Medical Informatics Assoc., 2023

Use GPT-J Prompt Generation with RoBERTa for NER Models on Diagnosis Extraction of Periodontal Diagnosis from Electronic Dental Records.
CoRR, 2023

FERI: A Multitask-based Fairness Achieving Algorithm with Applications to Fair Organ Transplantation.
CoRR, 2023

Split Learning for Distributed Collaborative Training of Deep Learning Models in Health Informatics.
CoRR, 2023

Dental CLAIRES: Contrastive LAnguage Image REtrieval Search for Dental Research.
CoRR, 2023

Sensitive Data Detection with High-Throughput Machine Learning Models in Electrical Health Records.
CoRR, 2023

Predicting multiple sclerosis disease severity with multimodal deep neural networks.
CoRR, 2023

Multi-Task Learning for Post-transplant Cause of Death Analysis: A Case Study on Liver Transplant.
CoRR, 2023

LLM for Patient-Trial Matching: Privacy-Aware Data Augmentation Towards Better Performance and Generalizability.
CoRR, 2023

Zero-shot Clinical Entity Recognition using ChatGPT.
CoRR, 2023

Towards Fair Patient-Trial Matching via Patient-Criterion Level Fairness Constraint.
CoRR, 2023

SPeC: A Soft Prompt-Based Calibration on Mitigating Performance Variability in Clinical Notes Summarization.
CoRR, 2023

Does Synthetic Data Generation of LLMs Help Clinical Text Mining?
CoRR, 2023

Privacy preserving identification of population stratification for collaborative genomic research.
Bioinform., 2023

Ensuring Trust in Genomics Research.
Proceedings of the 5th IEEE International Conference on Trust, 2023

MULTIPAR: Supervised Irregular Tensor Factorization with Multi-task Learning for Computational Phenotyping.
Proceedings of the Machine Learning for Health, 2023

Inferring Personalized Treatment Effect of Antihypertensives on Alzheimer's Disease Using Deep Learning.
Proceedings of the 11th IEEE International Conference on Healthcare Informatics, 2023

An End-to-end In-Silico and In-Vitro Drug Repurposing Pipeline for Glioblastoma.
Proceedings of the 11th IEEE International Conference on Healthcare Informatics, 2023

Extracting Periodontitis Diagnosis in Clinical Notes with RoBERTa and Regular Expression.
Proceedings of the 11th IEEE International Conference on Healthcare Informatics, 2023

Learning Physician's Treatment for Alzheimer's Disease based on Electronic Health Records and Reinforcement Learning.
Proceedings of the 11th IEEE International Conference on Healthcare Informatics, 2023

Graph Representation Learning For Stroke Recurrence Prediction.
Proceedings of the IEEE International Conference on Acoustics, 2023

DiscoverPath: A Knowledge Refinement and Retrieval System for Interdisciplinarity on Biomedical Research.
Proceedings of the 32nd ACM International Conference on Information and Knowledge Management, 2023

FinFax: Fast Interpretation of Fax with NLP.
Proceedings of the 14th ACM International Conference on Bioinformatics, 2023

2022
Privacy-aware estimation of relatedness in admixed populations.
Briefings Bioinform., November, 2022

VERTICOX: Vertically Distributed Cox Proportional Hazards Model Using the Alternating Direction Method of Multipliers.
IEEE Trans. Knowl. Data Eng., 2022

Privacy-Preserving and Efficient Verification of the Outcome in Genome-Wide Association Studies.
Proc. Priv. Enhancing Technol., 2022

Model-Protected Multi-Task Learning.
IEEE Trans. Pattern Anal. Mach. Intell., 2022

Federated learning algorithms for generalized mixed-effects model (GLMM) on horizontally partitioned data from distributed sources.
BMC Medical Informatics Decis. Mak., 2022

Privacy-preserving logistic regression with secret sharing.
BMC Medical Informatics Decis. Mak., 2022

A multi-task Gaussian process self-attention neural network for real-time prediction of the need for mechanical ventilators in COVID-19 patients.
J. Biomed. Informatics, 2022

Deep graph convolutional network for US birth data harmonization.
J. Biomed. Informatics, 2022

Generalized genomic data sharing for differentially private federated learning.
J. Biomed. Informatics, 2022

Privacy preserving collaborative learning of generalized linear mixed model.
J. Biomed. Informatics, 2022

The evolving privacy and security concerns for genomic data analysis and sharing as observed from the iDASH competition.
J. Am. Medical Informatics Assoc., 2022

Differentially Private Medical Texts Generation Using Generative Neural Networks.
ACM Trans. Comput. Heal., 2022

Systematic Design and Evaluation of Social Determinants of Health Ontology (SDoHO).
CoRR, 2022

Private Semi-supervised Knowledge Transfer for Deep Learning from Noisy Labels.
CoRR, 2022

MULTIPAR: Supervised Irregular Tensor Factorization with Multi-task Learning.
CoRR, 2022

Evaluation of vicinity-based hidden Markov models for genotype imputation.
BMC Bioinform., 2022

SVAT: Secure outsourcing of variant annotation and genotype aggregation.
BMC Bioinform., 2022

Toward a standard formal semantic representation of the model card report.
BMC Bioinform., 2022

Relational graph convolutional networks for predicting blood-brain barrier penetration of drug molecules.
Bioinform., 2022

IMI-CDE: an interactive interface for collaborative mapping of study variables to common data elements.
Proceedings of the 10th IEEE International Conference on Healthcare Informatics, 2022

Existing and emerging privacy challenges and solutions for federated data coordination.
Proceedings of the AMIA 2022, 2022

Fairly Predicting Graft Failure in Liver Transplant for Organ Assigning.
Proceedings of the AMIA 2022, 2022

Facilitating Federated Genomic Data Analysis by Identifying Record Correlations while Ensuring Privacy.
Proceedings of the AMIA 2022, 2022

2021
An interpretable deep-learning model for early prediction of sepsis in the emergency department.
Patterns, 2021

Efficient verification for outsourced genome-wide association studies.
J. Biomed. Informatics, 2021

Deep representation learning of patient data from Electronic Health Records (EHR): A systematic review.
J. Biomed. Informatics, 2021

Calibrating predictive model estimates in a distributed network of patient data.
J. Biomed. Informatics, 2021

Population stratification enables modeling effects of reopening policies on mortality and hospitalization rates.
J. Biomed. Informatics, 2021

Noise-tolerant similarity search in temporal medical data.
J. Biomed. Informatics, 2021

Are synthetic clinical notes useful for real natural language processing tasks: A case study on clinical entity recognition.
J. Am. Medical Informatics Assoc., 2021

Anticancer drug synergy prediction in understudied tissues using transfer learning.
J. Am. Medical Informatics Assoc., 2021

Privacy-protecting, reliable response data discovery using COVID-19 patient observations.
J. Am. Medical Informatics Assoc., 2021

COVID-19 trial graph: a linked graph for COVID-19 clinical trials.
J. Am. Medical Informatics Assoc., 2021

Online Algorithm for Differentially Private Genome-wide Association Studies.
ACM Trans. Comput. Heal., 2021

Scalable Causal Structure Learning: New Opportunities in Biomedicine.
CoRR, 2021

Heterogeneous Treatment Effect Estimation using machine learning for Healthcare application: tutorial and benchmark.
CoRR, 2021

Use of the Deep Learning Approach to Measure Alveolar Bone Level.
CoRR, 2021

A Fast PC Algorithm with Reversed-order Pruning and A Parallelization Strategy.
CoRR, 2021

An Empirical Study of UMLS Concept Extraction from Clinical Notes using Boolean Combination Ensembles.
CoRR, 2021

HEAR: Human Action Recognition via Neural Networks on Homomorphically Encrypted Data.
CoRR, 2021

COVID-19 Smart Chatbot Prototype for Patient Monitoring.
CoRR, 2021

Real-time Prediction for Mechanical Ventilation in COVID-19 Patients using A Multi-task Gaussian Process Multi-objective Self-attention Network.
CoRR, 2021

De-identification of Unstructured Clinical Texts from Sequence to Sequence Perspective.
Proceedings of the CCS '21: 2021 ACM SIGSAC Conference on Computer and Communications Security, Virtual Event, Republic of Korea, November 15, 2021

DBNet: a novel deep learning framework for mechanical ventilation prediction using electronic health records.
Proceedings of the BCB '21: 12th ACM International Conference on Bioinformatics, 2021

Privacy preserving neural networks for electronic health records de-identification.
Proceedings of the BCB '21: 12th ACM International Conference on Bioinformatics, 2021

Privacy-Preserving Federated Biomedical Data Analysis.
Proceedings of the AMIA 2021, American Medical Informatics Association Annual Symposium, San Diego, CA, USA, October 30, 2021, 2021

The Combination of Graph Neuron Network and Multi-Task Learning Model for Cancer Drug Combination Prediction.
Proceedings of the AMIA 2021, American Medical Informatics Association Annual Symposium, San Diego, CA, USA, October 30, 2021, 2021

2020
Secure and Differentially Private Logistic Regression for Horizontally Distributed Data.
IEEE Trans. Inf. Forensics Secur., 2020

REACT: real-time contact tracing and risk monitoring using privacy-enhanced mobile tracking.
ACM SIGSPATIAL Special, 2020

A lightweight convolutional neural network for assessing an EEG risk marker for sudden unexpected death in epilepsy.
BMC Medical Informatics Decis. Mak., 2020

Learning to detect the onset of slow activity after a generalized tonic-clonic seizure.
BMC Medical Informatics Decis. Mak., 2020

Categorisation of EEG suppression using enhanced feature extraction for SUDEP risk assessment.
BMC Medical Informatics Decis. Mak., 2020

Automated detection of activity onset after postictal generalized EEG suppression.
BMC Medical Informatics Decis. Mak., 2020

A community effort for automatic detection of postictal generalized EEG suppression in epilepsy.
BMC Medical Informatics Decis. Mak., 2020

Predict or draw blood: An integrated method to reduce lab tests.
J. Biomed. Informatics, 2020

Harmonized representation learning on dynamic EHR graphs.
J. Biomed. Informatics, 2020

Temporal phenotyping for transitional disease progress: An application to epilepsy and Alzheimer's disease.
J. Biomed. Informatics, 2020

A secure system for genomics clinical decision support.
J. Biomed. Informatics, 2020

SCOR: A secure international informatics infrastructure to investigate COVID-19.
J. Am. Medical Informatics Assoc., 2020

Generating sequential electronic health records using dual adversarial autoencoder.
J. Am. Medical Informatics Assoc., 2020

COVID-19 TestNorm: A tool to normalize COVID-19 testing names to LOINC codes.
J. Am. Medical Informatics Assoc., 2020

Protecting patient privacy in survival analyses.
J. Am. Medical Informatics Assoc., 2020

A deep learning solution to recommend laboratory reduction strategies in ICU.
Int. J. Medical Informatics, 2020

Drug Repurposing for COVID-19 using Graph Neural Network with Genetic, Mechanistic, and Epidemiological Validation.
CoRR, 2020

Secure and Differentially Private Bayesian Learning on Distributed Data.
CoRR, 2020

Efficient determination of equivalence for encrypted data.
Comput. Secur., 2020

RADAR: Recurrent Autoencoder Based Detector for Adversarial Examples on Temporal EHR.
Proceedings of the Machine Learning and Knowledge Discovery in Databases: Applied Data Science Track, 2020

Dataset and Enhanced Model for Eligibility Criteria-to-SQL Semantic Parsing.
Proceedings of The 12th Language Resources and Evaluation Conference, 2020

Secure Count Query on Encrypted Heterogeneous Data.
Proceedings of the IEEE Intl Conf on Dependable, 2020

Towards Training Robust Private Aggregation of Teacher Ensembles Under Noisy Labels.
Proceedings of the 2020 IEEE International Conference on Big Data (IEEE BigData 2020), 2020

Deep Representation Learning of Patient Data from Electronic Health Records: A Systematic Review.
Proceedings of the AMIA 2020, 2020

The Open Health Natural Language Processing Collaboratory.
Proceedings of the AMIA 2020, 2020

Privacy-Preserving Methods for Vertically Partitioned Incomplete Data.
Proceedings of the AMIA 2020, 2020

2019
Modeling and Simulation Studies of Complex Biological Systems for Precision Medicine and Healthcare.
IEEE ACM Trans. Comput. Biol. Bioinform., 2019

SAFETY: Secure gwAs in Federated Environment through a hYbrid Solution.
IEEE ACM Trans. Comput. Biol. Bioinform., 2019

SecureLR: Secure Logistic Regression Model via a Hybrid Cryptographic Protocol.
IEEE ACM Trans. Comput. Biol. Bioinform., 2019

Time-sensitive clinical concept embeddings learned from large electronic health records.
BMC Medical Informatics Decis. Mak., 2019

A privacy-preserving distributed filtering framework for NLP artifacts.
BMC Medical Informatics Decis. Mak., 2019

Distributed learning from multiple EHR databases: Contextual embedding models for medical events.
J. Biomed. Informatics, 2019

From Brain Imaging to Graph Analysis: a study on ADNI's patient cohort.
CoRR, 2019

Combining Representation Learning with Tensor Factorization for Risk Factor Analysis - an application to Epilepsy and Alzheimer's disease.
CoRR, 2019

Privacy-preserving techniques of genomic data - a survey.
Briefings Bioinform., 2019

Feature Compression for Predicting Effective Drug Combination.
Proceedings of the 4th International Workshop on Semantics-Powered Data Mining and Analytics co-located with the 18th International Semantic Web Conference (ISWC 2019), 2019

Insomnia Prediction Using Temporal Feature of Spindles.
Proceedings of the 2019 IEEE International Conference on Healthcare Informatics, 2019

Privacy-Preserving Tensor Factorization for Collaborative Health Data Analysis.
Proceedings of the 28th ACM International Conference on Information and Knowledge Management, 2019

Discriminative Sleep Patterns of Alzheimer's Disease via Tensor Factorization.
Proceedings of the AMIA 2019, 2019

VERTICOX: Vertically Distributed Cox Proportional Hazards Model.
Proceedings of the AMIA 2019, 2019

2018
Selecting Optimal Subset to Release Under Differentially Private M-Estimators from Hybrid Datasets.
IEEE Trans. Knowl. Data Eng., 2018

GenoPri'16: International Workshop on Genome Privacy and Security.
IEEE ACM Trans. Comput. Biol. Bioinform., 2018

Patient ranking with temporally annotated data.
J. Biomed. Informatics, 2018

Perfectly Secure and Efficient Two-Party Electronic-Health-Record Linkage.
IEEE Internet Comput., 2018

Secure Logistic Regression based on Homomorphic Encryption.
IACR Cryptol. ePrint Arch., 2018

Secure Outsourced Matrix Computation and Application to Neural Networks.
IACR Cryptol. ePrint Arch., 2018

Secure large-scale genome data storage and query.
Comput. Methods Programs Biomed., 2018

Deep learning for healthcare: review, opportunities and challenges.
Briefings Bioinform., 2018

Privacy Preserving Probabilistic Record Linkage Without Trusted Third Party.
Proceedings of the 16th Annual Conference on Privacy, Security and Trust, 2018

Pattern Similarity in Time Interval Sequences.
Proceedings of the IEEE International Conference on Healthcare Informatics, 2018

Early Prediction of Acute Kidney Injury in Critical Care Setting Using Clinical Notes.
Proceedings of the IEEE International Conference on Bioinformatics and Biomedicine, 2018

Highlights Talks at ACM BCB 2018.
Proceedings of the 2018 ACM International Conference on Bioinformatics, 2018

2017
Private and Efficient Query Processing on Outsourced Genomic Databases.
IEEE J. Biomed. Health Informatics, 2017

Progressive Dictionary Learning With Hierarchical Predictive Structure for Low Bit-Rate Scalable Video Coding.
IEEE Trans. Image Process., 2017

Omicseq: a web-based search engine for exploring omics datasets.
Nucleic Acids Res., 2017

Addressing Beacon re-identification attacks: quantification and mitigation of privacy risks.
J. Am. Medical Informatics Assoc., 2017

SAFETY: Secure gwAs in Federated Environment Through a hYbrid solution with Intel SGX and Homomorphic Encryption.
CoRR, 2017

Mechanisms to protect the privacy of families when using the transmission disequilibrium test in genome-wide association studies.
Bioinform., 2017

PRINCESS: Privacy-protecting Rare disease International Network Collaboration via Encryption through Software guard extensionS.
Bioinform., 2017

Partitioning-Based Mechanisms Under Personalized Differential Privacy.
Proceedings of the Advances in Knowledge Discovery and Data Mining, 2017

Federated Tensor Factorization for Computational Phenotyping.
Proceedings of the 23rd ACM SIGKDD International Conference on Knowledge Discovery and Data Mining, Halifax, NS, Canada, August 13, 2017

A Mortality Study for ICU Patients Using Bursty Medical Events.
Proceedings of the 33rd IEEE International Conference on Data Engineering, 2017

Count Everything: Secure Count Query Framework Across Big Data Centers.
Proceedings of the Summit on Clinical Research Informatics, 2017

DiagTree: Diagnostic Tree for Differential Diagnosis.
Proceedings of the 2017 ACM on Conference on Information and Knowledge Management, 2017

SCOTCH: Secure Counting Of encrypTed genomiC data using a Hybrid approach.
Proceedings of the AMIA 2017, 2017

A Scalable Privacy-preserving Data Generation Methodology for Exploratory Analysis.
Proceedings of the AMIA 2017, 2017

A Simple and Efficient Method for Private Exact Matching.
Proceedings of the AMIA 2017, 2017

MALTASE: a Mobile AppLication To improve patients' Access to their data Sharing preferencE.
Proceedings of the AMIA 2017, 2017

Honoring Patient's Data Sharing Preferences: Implementation Challenges.
Proceedings of the AMIA 2017, 2017

2016
PATTERN: Pain Assessment for paTients who can't TEll using Restricted Boltzmann machiNe.
BMC Medical Informatics Decis. Mak., 2016

Secure Multi-pArty Computation Grid LOgistic REgression (SMAC-GLORE).
BMC Medical Informatics Decis. Mak., 2016

VERTIcal Grid lOgistic regression (VERTIGO).
J. Am. Medical Informatics Assoc., 2016

HEALER: homomorphic computation of ExAct Logistic rEgRession for secure rare disease variants analysis in GWAS.
Bioinform., 2016

iCONCUR: informed CONsent for Clinical data and biosample Use for Research.
Proceedings of the AMIA 2016, 2016

Calibration of Predictive Models for Clinical Decision Making: Personalizing Prevention, Treatment, and Disease Progression.
Proceedings of the AMIA 2016, 2016

Secure Record Linkage for Precision Medicine and Patient Centered Outcomes Research.
Proceedings of the AMIA 2016, 2016

An Integrated Privacy Preserving Collaborative Analytics Platform: The PCORnet pSCANNER-PopMedNet TM Software Suite.
Proceedings of the AMIA 2016, 2016

Computational Phenotyping Methods.
Proceedings of the AMIA 2016, 2016

PREMIX: PRivacy-preserving EstiMation of Individual admiXture.
Proceedings of the AMIA 2016, 2016

Linking patients with non-PHI data.
Proceedings of the AMIA 2016, 2016

2015
FORESEE: Fully Outsourced secuRe gEnome Study basEd on homomorphic Encryption.
BMC Medical Informatics Decis. Mak., December, 2015

Privacy-preserving GWAS analysis on federated genomic datasets.
BMC Medical Informatics Decis. Mak., December, 2015

Grid multi-category response logistic models.
BMC Medical Informatics Decis. Mak., 2015

Choosing blindly but wisely: differentially private solicitation of DNA datasets for disease marker discovery.
J. Am. Medical Informatics Assoc., 2015

A system to build distributed multivariate models and manage disparate data sharing policies: implementation in the scalable national network for effectiveness research.
J. Am. Medical Informatics Assoc., 2015

WebDISCO: a web service for distributed cox model learning without patient-level data sharing.
J. Am. Medical Informatics Assoc., 2015

Trends in biomedical informatics: automated topic analysis of JAMIA articles.
J. Am. Medical Informatics Assoc., 2015

Fast and Robust Parallel SGD Matrix Factorization.
Proceedings of the 21th ACM SIGKDD International Conference on Knowledge Discovery and Data Mining, 2015

Differentially Private Histogram Publication for Dynamic Datasets: an Adaptive Sampling Approach.
Proceedings of the 24th ACM International Conference on Information and Knowledge Management, 2015

Cloud-assisted distributed private data sharing.
Proceedings of the 6th ACM Conference on Bioinformatics, 2015

Preserving Genome Privacy in Research Studies.
Proceedings of the Medical Data Privacy Handbook, 2015

Private Genome Data Dissemination.
Proceedings of the Medical Data Privacy Handbook, 2015

Differentially Private Histogram and Synthetic Data Publication.
Proceedings of the Medical Data Privacy Handbook, 2015

2014
Data-Driven Hierarchical Structure Kernel for Multiscale Part-Based Object Recognition.
IEEE Trans. Image Process., 2014

DPSynthesizer: Differentially Private Data Synthesizer for Privacy Preserving Data Sharing.
Proc. VLDB Endow., 2014

Detecting inappropriate access to electronic health records using collaborative filtering.
Mach. Learn., 2014

A community assessment of privacy preserving techniques for human genomes.
BMC Medical Informatics Decis. Mak., 2014

HUGO: Hierarchical mUlti-reference Genome cOmpression for aligned reads.
J. Am. Medical Informatics Assoc., 2014

PhenDisco: phenotype discovery system for the database of genotypes and phenotypes.
J. Am. Medical Informatics Assoc., 2014

SAPPIRE: a Prototype Mobile Tool for Pressure Ulcer Risk Assessment.
Proceedings of the Nursing Informatics 2014 - East Meets West eSMART+, 2014

Differentially Private Synthesization of Multi-Dimensional Data using Copula Functions.
Proceedings of the 17th International Conference on Extending Database Technology, 2014

Multiscale Online Dictionary Learning for Quality Scalable Video Coding.
Proceedings of the Data Compression Conference, 2014

A Keyword Suggestion Strategy Based on Citation Networks.
Proceedings of the AMIA 2014, 2014

Trends in Publication of Nursing Informatics Research.
Proceedings of the AMIA 2014, 2014

2013
Differential-Private Data Publishing Through Component Analysis.
Trans. Data Priv., 2013

Structured Set Intra Prediction With Discriminative Learning in a Max-Margin Markov Network for High Efficiency Video Coding.
IEEE Trans. Circuits Syst. Video Technol., 2013

EXpectation Propagation LOgistic REgRession (EXPLORER): Distributed privacy-preserving online model learning.
J. Biomed. Informatics, 2013

Privacy-preserving heterogeneous health data sharing.
J. Am. Medical Informatics Assoc., 2013

SHARE: system design and case studies for statistical health information release.
J. Am. Medical Informatics Assoc., 2013

WebGLORE: a Web service for Grid LOgistic REgression.
Bioinform., 2013

Nucleotide sequence alignment using sparse coding and belief propagation.
Proceedings of the 35th Annual International Conference of the IEEE Engineering in Medicine and Biology Society, 2013

Genome Sequence Compression with Distributed Source Coding.
Proceedings of the 2013 Data Compression Conference, 2013

An Adaptive Difference Distribution-Based Coding with Hierarchical Tree Structure for DNA Sequence Compression.
Proceedings of the 2013 Data Compression Conference, 2013

Text mining driven drug-drug interaction detection.
Proceedings of the 2013 IEEE International Conference on Bioinformatics and Biomedicine, 2013

When you can't tell when it hurts: a preliminary algorithm to assess pain in patients who can't communicate.
Proceedings of the AMIA 2013, 2013

2012
A Randomized Response Model for Privacy Preserving Smart Metering.
IEEE Trans. Smart Grid, 2012

Grid Binary LOgistic REgression (GLORE): building shared models without sharing data.
J. Am. Medical Informatics Assoc., 2012

iDASH: integrating data for analysis, anonymization, and sharing.
J. Am. Medical Informatics Assoc., 2012

Calibrating predictive model estimates to support personalized medicine.
J. Am. Medical Informatics Assoc., 2012

A patient-driven adaptive prediction technique to improve personalized risk estimation for clinical decision support.
J. Am. Medical Informatics Assoc., 2012

Shape-oriented segmentation with graph matching corroboration for silhouette tracking.
Proceedings of the 2012 Visual Communications and Image Processing, 2012

Predicting accurate probabilities with a ranking loss.
Proceedings of the 29th International Conference on Machine Learning, 2012

Semi-supervised object recognition using structure kernel.
Proceedings of the 19th IEEE International Conference on Image Processing, 2012

Pulmonary Blood Vessels and Nodules Segmentation via Vessel Energy Function and Radius-Variable Sphere Model.
Proceedings of the 2012 IEEE Second International Conference on Healthcare Informatics, 2012

Privacy-Preserving Biometric System for Secure Fingerprint Authentication.
Proceedings of the 2012 IEEE Second International Conference on Healthcare Informatics, 2012

SecUre Privacy-presERving Medical Image CompRessiOn (SUPERMICRO).
Proceedings of the 2012 IEEE Second International Conference on Healthcare Informatics, 2012

Evaluation of Segmentation Algorithms in CT Scanning.
Proceedings of the 2012 IEEE Second International Conference on Healthcare Informatics, 2012

A Randomized Response Model for Privacy-Preserving Data Dissemination.
Proceedings of the 2012 IEEE Second International Conference on Healthcare Informatics, 2012

Institutional Privacy-preserving Distributed binary Logistic Regression (IPDLR).
Proceedings of the AMIA 2012, 2012

A Collaborative Framework for Distributed Privacy-Preserving Support Vector Machine Learning.
Proceedings of the AMIA 2012, 2012

Selecting Cases for Whom Additional Tests Can Improve Prognostication.
Proceedings of the AMIA 2012, 2012

2011
Trends in biomedical informatics: most cited topics from recent years.
J. Am. Medical Informatics Assoc., 2011

2010
Temporal Maximum Margin Markov Network.
Proceedings of the Machine Learning and Knowledge Discovery in Databases, 2010

Structure preserving semantic coherent object segmentation.
Proceedings of the International Conference on Image Processing, 2010

Adaptive Gaussian Process for Short-Term Wind Speed Forecasting.
Proceedings of the ECAI 2010, 2010

2009
Sparse higher order conditional random fields for improved sequence labeling.
Proceedings of the 26th Annual International Conference on Machine Learning, 2009

2008
Privacy-preserving SVM classification.
Knowl. Inf. Syst., 2008

2007
2D Image Database Indexing: A Coefficient-Based Approach.
Proceedings of the 2007 IEEE International Conference on Multimedia and Expo, 2007

New Directions in Contact Free Hand Recognition.
Proceedings of the International Conference on Image Processing, 2007

2006
Privacy-preserving SVM using nonlinear kernels on horizontally partitioned data.
Proceedings of the 2006 ACM Symposium on Applied Computing (SAC), 2006

Privacy-Preserving SVM Classification on Vertically Partitioned Data.
Proceedings of the Advances in Knowledge Discovery and Data Mining, 2006

2005
Robust automatic optic disk segmentation.
Proceedings of the International Conference on Computer Graphics and Interactive Techniques, 2005

Exploring volume rendering with path tracing.
Proceedings of the International Conference on Computer Graphics and Interactive Techniques, 2005


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