Xiaoqi Zheng

Orcid: 0000-0002-1832-4404

According to our database1, Xiaoqi Zheng authored at least 26 papers between 2010 and 2024.

Collaborative distances:
  • Dijkstra number2 of four.
  • Erdős number3 of four.

Timeline

Legend:

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PhD thesis 
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Links

On csauthors.net:

Bibliography

2024
A novel hypergraph model for identifying and prioritizing personalized drivers in cancer.
PLoS Comput. Biol., 2024

Embedding enhancement with foreground feature alignment and primitive knowledge for few-shot learning.
Eng. Appl. Artif. Intell., 2024

2023
<i>E</i>-value: a superior alternative to <i>P</i>-value and its adjustments in DNA methylation studies.
Briefings Bioinform., July, 2023

TRAmHap: accurate prediction of transcriptional activity from DNA methylation haplotypes in bisulfite-sequencing data.
Briefings Bioinform., July, 2023

ExosomePurity: tumour purity deconvolution in serum exosomes based on miRNA signatures.
Briefings Bioinform., May, 2023

2022
Secuer: Ultrafast, scalable and accurate clustering of single-cell RNA-seq data.
PLoS Comput. Biol., December, 2022

mHapTk: a comprehensive toolkit for the analysis of DNA methylation haplotypes.
Bioinform., November, 2022

DriverRWH: discovering cancer driver genes by random walk on a gene mutation hypergraph.
BMC Bioinform., 2022

Purification of tumor methylomes through residual decomposition.
Proceedings of the IEEE International Conference on Bioinformatics and Biomedicine, 2022

2021
TimNet: A text-image matching network integrating multi-stage feature extraction with multi-scale metrics.
Neurocomputing, 2021

The DNA methylation haplotype (mHap) format and mHapTools.
Bioinform., 2021

2020
Deconvolution of heterogeneous tumor samples using partial reference signals.
PLoS Comput. Biol., 2020

Detection of differentially methylated CpG sites between tumor samples with uneven tumor purities.
Bioinform., 2020

A comprehensive review of computational prediction of genome-wide features.
Briefings Bioinform., 2020

2019
Comprehensive anticancer drug response prediction based on a simple cell line-drug complex network model.
BMC Bioinform., 2019

2018
Universal informative CpG sites for inferring tumor purity from DNA methylation microarray data.
J. Bioinform. Comput. Biol., 2018

Exploration on education model of international engineering competencies for undergraduate students through Project-Based Learning: A case study from China.
Proceedings of the IEEE 10th International Conference on Engineering Education, 2018

2017
A machine-learning approach for predicting palmitoylation sites from integrated sequence-based features.
J. Bioinform. Comput. Biol., 2017

Accounting for tumor purity improves cancer subtype classification from DNA methylation data.
Bioinform., 2017

2015
Predicting Anticancer Drug Responses Using a Dual-Layer Integrated Cell Line-Drug Network Model.
PLoS Comput. Biol., 2015

Predicting tumor purity from methylation microarray data.
Bioinform., 2015

2014
A computational method of predicting regulatory interactions in Arabidopsis based on gene expression data and sequence information.
Comput. Biol. Chem., 2014

Sequence-based identification of recombination spots using pseudo nucleic acid representation and recursive feature extraction by linear kernel SVM.
BMC Bioinform., 2014

2013
Prioritization of candidate disease genes by topological similarity between disease and protein diffusion profiles.
BMC Bioinform., 2013

2011
Similarity analysis of DNA sequences based on the weighted pseudo-entropy.
J. Comput. Chem., 2011

2010
An information-theoretic approach to the prediction of protein structural class.
J. Comput. Chem., 2010


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