Xiao-Rui Su

Orcid: 0000-0001-5468-6085

Affiliations:
  • Chinese Academy of Sciences, Xinjiang Technical Institute of Physics and Chemistry, Urumqi, China


According to our database1, Xiao-Rui Su authored at least 36 papers between 2020 and 2025.

Collaborative distances:
  • Dijkstra number2 of four.
  • Erdős number3 of four.

Timeline

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Bibliography

2025
Regulation-aware graph learning for drug repositioning over heterogeneous biological network.
Inf. Sci., 2025

2024
Learning Sequential and Structural Dependencies Between Nucleotides for RNA N6-Methyladenosine Site Identification.
IEEE CAA J. Autom. Sinica, October, 2024

Motif-Aware miRNA-Disease Association Prediction via Hierarchical Attention Network.
IEEE J. Biomed. Health Informatics, July, 2024

Discovering Consensus Regions for Interpretable Identification of RNA N6-Methyladenosine Modification Sites via Graph Contrastive Clustering.
IEEE J. Biomed. Health Informatics, April, 2024

Fuzzy-Based Deep Attributed Graph Clustering.
IEEE Trans. Fuzzy Syst., April, 2024

Fusing Higher and Lower-Order Biological Information for Drug Repositioning via Graph Representation Learning.
IEEE Trans. Emerg. Top. Comput., 2024

Knowledge Graph Based Agent for Complex, Knowledge-Intensive QA in Medicine.
CoRR, 2024

Dual-Channel Learning Framework for Drug-Drug Interaction Prediction via Relation-Aware Heterogeneous Graph Transformer.
Proceedings of the Thirty-Eighth AAAI Conference on Artificial Intelligence, 2024

2023
Biocaiv: an integrative webserver for motif-based clustering analysis and interactive visualization of biological networks.
BMC Bioinform., December, 2023

iGRLDTI: an improved graph representation learning method for predicting drug-target interactions over heterogeneous biological information network.
Bioinform., August, 2023

Biomedical Knowledge Graph Embedding With Capsule Network for Multi-Label Drug-Drug Interaction Prediction.
IEEE Trans. Knowl. Data Eng., June, 2023

Incorporating higher order network structures to improve miRNA-disease association prediction based on functional modularity.
Briefings Bioinform., January, 2023

Predicting Drug-Target Interactions Over Heterogeneous Information Network.
IEEE J. Biomed. Health Informatics, 2023

Multi-level Subgraph Representation Learning for Drug-Disease Association Prediction Over Heterogeneous Biological Information Network.
Proceedings of the Advanced Intelligent Computing Technology and Applications, 2023

A Deep Learning Approach Incorporating Data Missing Mechanism in Predicting Acute Kidney Injury in ICU.
Proceedings of the Advanced Intelligent Computing Technology and Applications, 2023

A Novel Graph Representation Learning Model for Drug Repositioning Using Graph Transition Probability Matrix Over Heterogenous Information Networks.
Proceedings of the Advanced Intelligent Computing Technology and Applications, 2023

Drug Repositioning Method Based on Pre-trained Large Model and Network Embedding Representation.
Proceedings of the IEEE International Conference on Data Mining, 2023

Learning RNA sequence patterns to interpretably identify m6A modification sites.
Proceedings of the IEEE International Conference on Bioinformatics and Biomedicine, 2023

2022
NSECDA: Natural Semantic Enhancement for CircRNA-Disease Association Prediction.
IEEE J. Biomed. Health Informatics, 2022

RLFDDA: a meta-path based graph representation learning model for drug-disease association prediction.
BMC Bioinform., 2022

Multi-view heterogeneous molecular network representation learning for protein-protein interaction prediction.
BMC Bioinform., 2022

A geometric deep learning framework for drug repositioning over heterogeneous information networks.
Briefings Bioinform., 2022

HINGRL: predicting drug-disease associations with graph representation learning on heterogeneous information networks.
Briefings Bioinform., 2022

A machine learning framework based on multi-source feature fusion for circRNA-disease association prediction.
Briefings Bioinform., 2022

Attention-based Knowledge Graph Representation Learning for Predicting Drug-drug Interactions.
Briefings Bioinform., 2022

A deep learning method for repurposing antiviral drugs against new viruses via multi-view nonnegative matrix factorization and its application to SARS-CoV-2.
Briefings Bioinform., 2022

A Novel Fuzzy-Based MOPSO Algorithm for Identifying Clusters From Complex Networks.
Proceedings of the 34th IEEE International Conference on Tools with Artificial Intelligence, 2022

MRLDTI: A Meta-path-Based Representation Learning Model for Drug-Target Interaction Prediction.
Proceedings of the Intelligent Computing Theories and Application, 2022

2021
In silico drug repositioning using deep learning and comprehensive similarity measures.
BMC Bioinform., 2021

SANE: A sequence combined attentive network embedding model for COVID-19 drug repositioning.
Appl. Soft Comput., 2021

Detection of Drug-Drug Interactions Through Knowledge Graph Integrating Multi-attention with Capsule Network.
Proceedings of the Intelligent Computing Theories and Application, 2021

Protein-Protein Interaction Prediction by Integrating Sequence Information and Heterogeneous Network Representation.
Proceedings of the Intelligent Computing Theories and Application, 2021

Predicting miRNA-Disease Associations via a New MeSH Headings Representation of Diseases and eXtreme Gradient Boosting.
Proceedings of the Intelligent Computing Theories and Application, 2021

2020
A Unified Deep Biological Sequence Representation Learning with Pretrained Encoder-Decoder Model.
Proceedings of the Intelligent Computing Theories and Application, 2020

A Novel Computational Approach for Predicting Drug-Target Interactions via Network Representation Learning.
Proceedings of the Intelligent Computing Theories and Application, 2020

Prediction of LncRNA-Disease Associations Based on Network Representation Learning.
Proceedings of the IEEE International Conference on Bioinformatics and Biomedicine, 2020


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