Wyeth W. Wasserman
Orcid: 0000-0001-6098-6412Affiliations:
- University of British Columbia, Vancouver, BC, Canada
According to our database1,
Wyeth W. Wasserman
authored at least 37 papers
between 2002 and 2023.
Collaborative distances:
Collaborative distances:
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Bibliography
2023
OnTarget: <i>in silico</i> design of MiniPromoters for targeted delivery of expression.
Nucleic Acids Res., July, 2023
2022
JASPAR 2022: the 9th release of the open-access database of transcription factor binding profiles.
Nucleic Acids Res., 2022
2021
Demonstrating the utility of flexible sequence queries against indexed short reads with FlexTyper.
PLoS Comput. Biol., 2021
2020
JASPAR 2020: update of the open-access database of transcription factor binding profiles.
Nucleic Acids Res., 2020
2019
Development and user evaluation of a rare disease gene prioritization workflow based on cognitive ergonomics.
J. Am. Medical Informatics Assoc., 2019
Gene expression models based on transcription factor binding events confer insight into functional cis-regulatory variants.
Bioinform., 2019
TFEA.ChIP: a tool kit for transcription factor binding site enrichment analysis capitalizing on ChIP-seq datasets.
Bioinform., 2019
2018
JASPAR 2018: update of the open-access database of transcription factor binding profiles and its web framework.
Nucleic Acids Res., 2018
Genome-wide prediction of cis-regulatory regions using supervised deep learning methods.
BMC Bioinform., 2018
2016
JASPAR 2016: a major expansion and update of the open-access database of transcription factor binding profiles.
Nucleic Acids Res., 2016
J. Comput. Biol., 2016
Dynamic software design for clinical exome and genome analyses: insights from bioinformaticians, clinical geneticists, and genetic counselors.
J. Am. Medical Informatics Assoc., 2016
2015
The identification of cis-regulatory elements: A review from a machine learning perspective.
Biosyst., 2015
2014
NAR Breakthrough Article: TFBSshape: a motif database for DNA shape features of transcription factor binding sites.
Nucleic Acids Res., 2014
JASPAR 2014: an extensively expanded and updated open-access database of transcription factor binding profiles.
Nucleic Acids Res., 2014
Usability study of clinical exome analysis software: Top lessons learned and recommendations.
J. Biomed. Informatics, 2014
2013
PLoS Comput. Biol., 2013
2012
Quantitative biomedical annotation using medical subject heading over-representation profiles (MeSHOPs).
BMC Bioinform., 2012
2011
Validation of Skeletal Muscle <i>cis</i>-Regulatory Module Predictions Reveals Nucleotide Composition Bias in Functional Enhancers.
PLoS Comput. Biol., 2011
MIR@NT@N: a framework integrating transcription factors, microRNAs and their targets to identify sub-network motifs in a meta-regulation network model.
BMC Bioinform., 2011
2010
JASPAR 2010: the greatly expanded open-access database of transcription factor binding profiles.
Nucleic Acids Res., 2010
2009
The PAZAR database of gene regulatory information coupled to the ORCA toolkit for the study of regulatory sequences.
Nucleic Acids Res., 2009
2008
PLoS Comput. Biol., 2008
Nucleic Acids Res., 2008
2007
Nucleic Acids Res., 2007
2006
PLoS Comput. Biol., 2006
A new generation of JASPAR, the open-access repository for transcription factor binding site profiles.
Nucleic Acids Res., 2006
IBM J. Res. Dev., 2006
Identification of Over-Represented Combinations of Transcription Factor Binding Sites in Sets of Co-Expressed Genes.
Proceedings of 4th Asia-Pacific Bioinformatics Conference. 13-16 February 2006, 2006
2005
BMC Bioinform., 2005
2004
Nucleic Acids Res., 2004
JASPAR: an open-access database for eukaryotic transcription factor binding profiles.
Nucleic Acids Res., 2004
Nucleic Acids Res., 2004
2003
Identification of functional clusters of transcription factor binding motifs in genome sequences: the MSCAN algorithm.
Proceedings of the Eleventh International Conference on Intelligent Systems for Molecular Biology, June 29, 2003
2002
Bioinform., 2002