Woong-Hee Shin

According to our database, Woong-Hee Shin authored at least 15 papers between 2011 and 2024.

Collaborative distances:

• Dijkstra number of four.
• Erdős number of four.

2024

Accurate prediction of protein-ligand interactions by combining physical energy functions and graph-neural networks.

Yiyu Hong, Junsu Ha, Jaemin Sim, Chae Jo Lim, Kwang-Seok Oh, Ramakrishnan Chandrasekaran, Bomin Kim, Jieun Choi, Junsu Ko, Woong-Hee Shin, Juyong Lee

J. Cheminformatics, December, 2024

2021

SHREC 2021: Retrieval and classification of protein surfaces equipped with physical and chemical properties.

Andrea Raffo, Ulderico Fugacci, Silvia Biasotti, Walter Rocchia, Yonghuai Liu, Ekpo Otu, Reyer Zwiggelaar, David Hunter, Evangelia I. Zacharaki, Eleftheria Psatha, Dimitrios Laskos, Gerasimos Arvanitis, Konstantinos Moustakas, Tunde Aderinwale, Charles Christoffer, Woong-Hee Shin, Daisuke Kihara, Andrea Giachetti, Huu-Nghia Nguyen, Tuan-Duy Nguyen, Vinh-Thuyen Nguyen-Truong, Danh Le-Thanh, Hai-Dang Nguyen, Minh-Triet Tran

Comput. Graph., 2021

SHREC 2021: Surface-based Protein Domains Retrieval.

Florent Langenfeld, Tunde Aderinwale, Charles Christoffer, Woong-Hee Shin, Genki Terashi, Xiao Wang, Daisuke Kihara, Halim Benhabiles, Karim Hammoudi, Adnane Cabani, Féryal Windal, Mahmoud Melkemi, Ekpo Otu, Reyer Zwiggelaar, David Hunter, Yonghuai Liu, Léa Sirugue, Huu-Nghia H. Nguyen, Tuan-Duy H. Nguyen, Vinh-Thuyen Nguyen-Truong, Danh Le, Hai-Dang Nguyen, Minh-Triet Tran, Matthieu Montès

Proceedings of the 14th Eurographics Workshop on 3D Object Retrieval, 2021

2019

Study of the Variability of the Native Protein Structure.

Xusi Han, Woong-Hee Shin, Charles Christoffer, Genki Terashi, Lyman Monroe, Daisuke Kihara

Proceedings of the Encyclopedia of Bioinformatics and Computational Biology - Volume 3, 2019

Three-dimensional Krawtchouk descriptors for protein local surface shape comparison.

Atilla Sit, Woong-Hee Shin, Daisuke Kihara

Pattern Recognit., 2019

Predicting binding poses and affinity ranking in D3R Grand Challenge using PL-PatchSurfer2.0.

Woong-Hee Shin, Daisuke Kihara

J. Comput. Aided Mol. Des., 2019

2018

Modeling the assembly order of multimeric heteroprotein complexes.

Lenna X. Peterson, Yoichiro Togawa, Juan Esquivel-Rodríguez, Genki Terashi, Charles Christoffer, Amitava Roy, Woong-Hee Shin, Daisuke Kihara

PLoS Comput. Biol., 2018

2017

GalaxyDock BP2 score: a hybrid scoring function for accurate protein-ligand docking.

Minkyung Baek, Woong-Hee Shin, Hwan Won Chung, Chaok Seok

J. Comput. Aided Mol. Des., 2017

2016

Combined Approach of Patch-Surfer and PL-PatchSurfer for Protein-Ligand Binding Prediction in CSAR 2013 and 2014.

Xiaolei Zhu, Woong-Hee Shin, Hyungrae Kim, Daisuke Kihara

J. Chem. Inf. Model., 2016

Evaluation of GalaxyDock Based on the Community Structure-Activity Resource 2013 and 2014 Benchmark Studies.

Woong-Hee Shin, Gyu Rie Lee, Chaok Seok

J. Chem. Inf. Model., 2016

PL-PatchSurfer2: Improved Local Surface Matching-Based Virtual Screening Method That Is Tolerant to Target and Ligand Structure Variation.

Woong-Hee Shin, Charles Christoffer, Ji-Bo Wang, Daisuke Kihara

J. Chem. Inf. Model., 2016

2014

GalaxySite: ligand-binding-site prediction by using molecular docking.

Lim Heo, Woong-Hee Shin, Myeong Sup Lee, Chaok Seok

Nucleic Acids Res., 2014

2013

GalaxyDock2: Protein-ligand docking using beta-complex and global optimization.

Woong-Hee Shin, Jae-Kwan Kim, Deok-Soo Kim, Chaok Seok

J. Comput. Chem., 2013

2012

GalaxyDock: Protein-Ligand Docking with Flexible Protein Side-chains.

Woong-Hee Shin, Chaok Seok

J. Chem. Inf. Model., 2012

2011

LigDockCSA: Protein-ligand docking using conformational space annealing.

Woong-Hee Shin, Lim Heo, Juyong Lee, Junsu Ko, Chaok Seok, Jooyoung Lee

J. Comput. Chem., 2011