William Poole

According to our database, William Poole authored at least 12 papers between 2005 and 2024.

Collaborative distances:

• Dijkstra number of four.
• Erdős number of three.

2024

Pathspace Kalman Filters with Dynamic Process Uncertainty for Analyzing Time-course Data.

Chaitra Agrahar, William Poole, Simone Bianco, Hana El-Samad

CoRR, 2024

2023

Fast and flexible simulation and parameter estimation for synthetic biology using bioscrape.

Ayush Pandey, William Poole, Anandh Swaminathan, Victoria Hsiao, Richard M. Murray

J. Open Source Softw., March, 2023

Fast and flexible simulation and parameter estimation for synthetic biology using bioscrape.

Ayush Pandey, William Poole, Anandh Swaminathan, Victoria Hsiao, Richard M. Murray

Dataset, February, 2023

Autonomous Learning of Generative Models with Chemical Reaction Network Ensembles.

William Poole, Thomas E. Ouldridge, Manoj Gopalkrishnan

CoRR, 2023

2022

BioCRNpyler: Compiling chemical reaction networks from biomolecular parts in diverse contexts.

William Poole, Ayush Pandey, Andrey Shur, Zoltán A. Tuza, Richard M. Murray

PLoS Comput. Biol., 2022

In vitro convolutional neural networks.

William Poole

Nat. Mach. Intell., 2022

Detailed Balanced Chemical Reaction Networks as Generalized Boltzmann Machines.

William Poole, Thomas E. Ouldridge, Manoj Gopalkrishnan, Erik Winfree

CoRR, 2022

Vivarium: an interface and engine for integrative multiscale modeling in computational biology.

Eran Agmon, Ryan K. Spangler, Christopher J. Skalnik, William Poole, Shayn M. Peirce, Jerry H. Morrison, Markus W. Covert

Bioinform., 2022

2017

Multiscale mutation clustering algorithm identifies pan-cancer mutational clusters associated with pathway-level changes in gene expression.

William Poole, Kalle Leinonen, Ilya Shmulevich, Theo A. Knijnenburg, Brady Bernard

PLoS Comput. Biol., 2017

Chemical Boltzmann Machines.

William Poole, Andrés Ortiz-Muñoz, Abhishek Behera, Nick S. Jones, Thomas E. Ouldridge, Erik Winfree, Manoj Gopalkrishnan

Proceedings of the DNA Computing and Molecular Programming - 23rd International Conference, 2017

2016

Combining dependent <i>P-</i>values with an empirical adaptation of Brown's method.

William Poole, David L. Gibbs, Ilya Shmulevich, Brady Bernard, Theo A. Knijnenburg

Bioinform., 2016

2005

Agent-based simulation for software project planning.

David Joslin, William Poole

Proceedings of the 37th Winter Simulation Conference, Orlando, FL, USA, December 4-7, 2005, 2005