William M. Wells III

Affiliations:
  • Massachusetts Institute of Technology, Computer Science and Artificial Intelligence Laboratory
  • Harvard Medical School, Department of Radiology


According to our database1, William M. Wells III authored at least 230 papers between 1986 and 2024.

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Bibliography

2024
VESCL: an open source 2D vessel contouring library.
Int. J. Comput. Assist. Radiol. Surg., August, 2024

Unified Cross-Modal Image Synthesis with Hierarchical Mixture of Product-of-Experts.
CoRR, 2024

Calibrating Expressions of Certainty.
CoRR, 2024

Registration of Longitudinal Spine CTs for Monitoring Lesion Growth.
CoRR, 2024

Learning to Match 2D Keypoints Across Preoperative MR and Intraoperative Ultrasound.
Proceedings of the Simplifying Medical Ultrasound - 5th International Workshop, 2024

Intraoperative Registration by Cross-Modal Inverse Neural Rendering.
Proceedings of the Medical Image Computing and Computer Assisted Intervention - MICCAI 2024, 2024

Patient-Specific Real-Time Segmentation in Trackerless Brain Ultrasound.
Proceedings of the Medical Image Computing and Computer Assisted Intervention - MICCAI 2024, 2024

Two Projections Suffice for Cerebral Vascular Reconstruction.
Proceedings of the Medical Image Computing and Computer Assisted Intervention - MICCAI 2024, 2024

2023
Deep Learning for Detection and Localization of B-Lines in Lung Ultrasound.
IEEE J. Biomed. Health Informatics, September, 2023

Sample-Specific Debiasing for Better Image-Text Models.
Proceedings of the Machine Learning for Healthcare Conference, 2023

Learning Expected Appearances for Intraoperative Registration During Neurosurgery.
Proceedings of the Medical Image Computing and Computer Assisted Intervention - MICCAI 2023, 2023

Unified Brain MR-Ultrasound Synthesis Using Multi-modal Hierarchical Representations.
Proceedings of the Medical Image Computing and Computer Assisted Intervention - MICCAI 2023, 2023

MetaMorph: Learning Metamorphic Image Transformation with Appearance Changes.
Proceedings of the Information Processing in Medical Imaging, 2023

Using Multiple Instance Learning to Build Multimodal Representations.
Proceedings of the Information Processing in Medical Imaging, 2023

2022
Deep Diffusion MRI Registration (DDMReg): A Deep Learning Method for Diffusion MRI Registration.
IEEE Trans. Medical Imaging, 2022

Efficient Pairwise Neuroimage Analysis Using the Soft Jaccard Index and 3D Keypoint Sets.
IEEE Trans. Medical Imaging, 2022

Pose Estimation and Non-Rigid Registration for Augmented Reality During Neurosurgery.
IEEE Trans. Biomed. Eng., 2022

A Novel Supervised Contrastive Regression Framework for Prediction of Neurocognitive Measures Using Multi-Site Harmonized Diffusion MRI Tractography.
CoRR, 2022

Registering Image Volumes using 3D SIFT and Discrete SP-Symmetry.
CoRR, 2022

massNet: integrated processing and classification of spatially resolved mass spectrometry data using deep learning for rapid tumor delineation.
Bioinform., 2022

SuperWarp: Supervised Learning and Warping on U-Net for Invariant Subvoxel-Precise Registration.
Proceedings of the Biomedical Image Registration - 10th International Workshop, 2022

Double-Uncertainty Guided Spatial and Temporal Consistency Regularization Weighting for Learning-Based Abdominal Registration.
Proceedings of the Medical Image Computing and Computer Assisted Intervention - MICCAI 2022, 2022

On the Dataset Quality Control for Image Registration Evaluation.
Proceedings of the Medical Image Computing and Computer Assisted Intervention - MICCAI 2022, 2022

Model and Predict Age and Sex in Healthy Subjects Using Brain White Matter Features: A Deep Learning Approach.
Proceedings of the 19th IEEE International Symposium on Biomedical Imaging, 2022

2021
Image registration: Maximum likelihood, minimum entropy and deep learning.
Medical Image Anal., 2021

GPU optimization of the 3D Scale-invariant Feature Transform Algorithm and a Novel BRIEF-inspired 3D Fast Descriptor.
CoRR, 2021

Double-Uncertainty Assisted Spatial and Temporal Regularization Weighting for Learning-based Registration.
CoRR, 2021

Incorporating External Information in Tissue Subtyping: A Topic Modeling Approach.
Proceedings of the Machine Learning for Healthcare Conference, 2021

Equivariant Filters for Efficient Tracking in 3D Imaging.
Proceedings of the Medical Image Computing and Computer Assisted Intervention - MICCAI 2021 - 24th International Conference, Strasbourg, France, September 27, 2021

Multimodal Representation Learning via Maximization of Local Mutual Information.
Proceedings of the Medical Image Computing and Computer Assisted Intervention - MICCAI 2021 - 24th International Conference, Strasbourg, France, September 27, 2021

Unimodal Cyclic Regularization For Training Multimodal Image Registration Networks.
Proceedings of the 18th IEEE International Symposium on Biomedical Imaging, 2021

Prostate Cancer Diagnosis With Sparse Biopsy Data And In Presence Of Location Uncertainty.
Proceedings of the 18th IEEE International Symposium on Biomedical Imaging, 2021

2020
Keypoint Transfer for Fast Whole-Body Segmentation.
IEEE Trans. Medical Imaging, 2020

Confidence Calibration and Predictive Uncertainty Estimation for Deep Medical Image Segmentation.
IEEE Trans. Medical Imaging, 2020

Neuroimage signature from salient keypoints is highly specific to individuals and shared by close relatives.
NeuroImage, 2020

Large Scale Indexing of Generic Medical Image Data using Unbiased Shallow Keypoints and Deep CNN Features.
CoRR, 2020

DEMI: Discriminative Estimator of Mutual Information.
CoRR, 2020

Do Public Datasets Assure Unbiased Comparisons for Registration Evaluation?
CoRR, 2020

An Investigation of Feature-based Nonrigid Image Registration using Gaussian Process.
CoRR, 2020

Improving detection of prostate cancer foci via information fusion of MRI and temporal enhanced ultrasound.
Int. J. Comput. Assist. Radiol. Surg., 2020

A comparison of thin-plate spline deformation and finite element modeling to compensate for brain shift during tumor resection.
Int. J. Comput. Assist. Radiol. Surg., 2020

PEP: Parameter Ensembling by Perturbation.
Proceedings of the Advances in Neural Information Processing Systems 33: Annual Conference on Neural Information Processing Systems 2020, 2020

Image registration with deep probabilistic classifiers: application in radiation therapy.
Proceedings of the Medical Imaging 2020: Image-Guided Procedures, 2020

Alignment of cortical vessels viewed through the surgical microscope with preoperative imaging to compensate for brain shift.
Proceedings of the Medical Imaging 2020: Image-Guided Procedures, 2020

Adversarial Uni- and Multi-modal Stream Networks for Multimodal Image Registration.
Proceedings of the Medical Image Computing and Computer Assisted Intervention - MICCAI 2020, 2020

Are Registration Uncertainty and Error Monotonically Associated?
Proceedings of the Medical Image Computing and Computer Assisted Intervention - MICCAI 2020, 2020

Deformation Aware Augmented Reality for Craniotomy Using 3D/2D Non-rigid Registration of Cortical Vessels.
Proceedings of the Medical Image Computing and Computer Assisted Intervention - MICCAI 2020, 2020

Joint Modeling of Chest Radiographs and Radiology Reports for Pulmonary Edema Assessment.
Proceedings of the Medical Image Computing and Computer Assisted Intervention - MICCAI 2020, 2020

Investigation of Feature-Based Nonrigid Image Registration Using Gaussian Process.
Proceedings of the Bildverarbeitung für die Medizin 2020 - Algorithmen - Systeme, 2020

2019
Automatic Needle Segmentation and Localization in MRI With 3-D Convolutional Neural Networks: Application to MRI-Targeted Prostate Biopsy.
IEEE Trans. Medical Imaging, 2019

Deformable MRI-Ultrasound registration using correlation-based attribute matching for brain shift correction: Accuracy and generality in multi-site data.
NeuroImage, 2019

Pilot Study on Verifying the Monotonic Relationship between Error and Uncertainty in Deformable Registration for Neurosurgery.
CoRR, 2019

Semi-supervised Learning for Quantification of Pulmonary Edema in Chest X-Ray Images.
CoRR, 2019

Deep Information Theoretic Registration.
CoRR, 2019

Uncertainty-aware asynchronous scattered motion interpolation using Gaussian process regression.
Comput. Medical Imaging Graph., 2019

Semi-supervised image registration using deep learning.
Proceedings of the Medical Imaging 2019: Image-Guided Procedures, 2019

Preliminary results comparing thin-plate splines with finite element methods for modeling brain deformation during neurosurgery using intraoperative ultrasound.
Proceedings of the Medical Imaging 2019: Image-Guided Procedures, 2019

Probabilistic Image Registration via Deep Multi-class Classification: Characterizing Uncertainty.
Proceedings of the Uncertainty for Safe Utilization of Machine Learning in Medical Imaging and Clinical Image-Based Procedures, 2019

On the Applicability of Registration Uncertainty.
Proceedings of the Medical Image Computing and Computer Assisted Intervention - MICCAI 2019, 2019

Analyzing Brain Morphology on the Bag-of-Features Manifold.
Proceedings of the Information Processing in Medical Imaging, 2019

2018
Phantomless Auto-Calibration and Online Calibration Assessment for a Tracked Freehand 2-D Ultrasound Probe.
IEEE Trans. Medical Imaging, 2018

Groupwise structural parcellation of the whole cortex: A logistic random effects model based approach.
NeuroImage, 2018

Deep learning based automatic segmentation of lumbosacral nerves on non-contrast CT for radiographic evaluation: a pilot study.
CoRR, 2018

Semi-Supervised Deep Metrics for Image Registration.
CoRR, 2018

On the Ambiguity of Registration Uncertainty.
CoRR, 2018

Non-rigid registration of 3D ultrasound for neurosurgery using automatic feature detection and matching.
Int. J. Comput. Assist. Radiol. Surg., 2018

Using the variogram for vector outlier screening: application to feature-based image registration.
Int. J. Comput. Assist. Radiol. Surg., 2018

Efficient Laplace Approximation for Bayesian Registration Uncertainty Quantification.
Proceedings of the Medical Image Computing and Computer Assisted Intervention - MICCAI 2018, 2018

Deformable MRI-Ultrasound Registration via Attribute Matching and Mutual-Saliency Weighting for Image-Guided Neurosurgery.
Proceedings of the Simulation, Image Processing, and Ultrasound Systems for Assisted Diagnosis and Navigation, 2018

A Feature-Driven Active Framework for Ultrasound-Based Brain Shift Compensation.
Proceedings of the Medical Image Computing and Computer Assisted Intervention - MICCAI 2018, 2018

2017
Active Mean Fields for Probabilistic Image Segmentation: Connections with Chan-Vese and Rudin-Osher-Fatemi Models.
SIAM J. Imaging Sci., 2017

Probabilistic modeling of anatomical variability using a low dimensional parameterization of diffeomorphisms.
Medical Image Anal., 2017

The 19th International Conference on Medical Image Computing and Computer-Assisted Intervention (MICCAI 2016).
Medical Image Anal., 2017

Misdirected Registration Uncertainty.
CoRR, 2017

Guest editorial of the IJCARS MICCAI 2016 special issue.
Int. J. Comput. Assist. Radiol. Surg., 2017

Electroencephalographic Resting-State Networks: Source Localization of Microstates.
Brain Connect., 2017

DeepInfer: open-source deep learning deployment toolkit for image-guided therapy.
Proceedings of the Medical Imaging 2017: Image-Guided Procedures, 2017

Transfer Learning for Domain Adaptation in MRI: Application in Brain Lesion Segmentation.
Proceedings of the Medical Image Computing and Computer Assisted Intervention - MICCAI 2017, 2017

Classification of clinical significance of MRI prostate findings using 3D convolutional neural networks.
Proceedings of the Medical Imaging 2017: Computer-Aided Diagnosis, 2017

Comparison between two white matter segmentation strategies: An investigation into white matter segmentation consistency.
Proceedings of the 14th IEEE International Symposium on Biomedical Imaging, 2017

Automated connectivity-based groupwise cortical atlas generation: Application to data of neurosurgical patients with brain tumors for cortical parcellation prediction.
Proceedings of the 14th IEEE International Symposium on Biomedical Imaging, 2017

A Likelihood-Free Approach for Characterizing Heterogeneous Diseases in Large-Scale Studies.
Proceedings of the Information Processing in Medical Imaging, 2017

2016
Direct neural current imaging in an intact cerebellum with magnetic resonance imaging.
NeuroImage, 2016

Group-wise parcellation of the cortex through multi-scale spectral clustering.
NeuroImage, 2016

Medical Image Analysis - past, present, and future.
Medical Image Anal., 2016

Editorial for the Special Issue on MICCAI 2015.
Medical Image Anal., 2016

Increasing the impact of medical image computing using community-based open-access hackathons: The NA-MIC and 3D Slicer experience.
Medical Image Anal., 2016

Editorial on Special Issue on Probabilistic Models for Biomedical Image Analysis.
Comput. Vis. Image Underst., 2016

Low-Dimensional Statistics of Anatomical Variability via Compact Representation of Image Deformations.
Proceedings of the Medical Image Computing and Computer-Assisted Intervention - MICCAI 2016, 2016

Inferring Disease Status by Non-parametric Probabilistic Embedding.
Proceedings of the Medical Computer Vision and Bayesian and Graphical Models for Biomedical Imaging, 2016

How are siblings similar? How similar are siblings? Large-scale imaging genetics using local image features.
Proceedings of the 13th IEEE International Symposium on Biomedical Imaging, 2016

2015
Quantitative Susceptibility Mapping by Inversion of a Perturbation Field Model: Correlation With Brain Iron in Normal Aging.
IEEE Trans. Medical Imaging, 2015

Open-source image registration for MRI-TRUS fusion-guided prostate interventions.
Int. J. Comput. Assist. Radiol. Surg., 2015

Hybrid Utrasound and MRI Acquisitions for High-Speed Imaging of Respiratory Organ Motion.
Proceedings of the Medical Image Computing and Computer-Assisted Intervention - MICCAI 2015, 2015

RF Ultrasound Distribution-Based Confidence Maps.
Proceedings of the Medical Image Computing and Computer-Assisted Intervention - MICCAI 2015, 2015

Keypoint Transfer Segmentation.
Proceedings of the Information Processing in Medical Imaging, 2015

A Feature-Based Approach to Big Data Analysis of Medical Images.
Proceedings of the Information Processing in Medical Imaging, 2015

Tractography-Driven Groupwise Multi-scale Parcellation of the Cortex.
Proceedings of the Information Processing in Medical Imaging, 2015

2014
Application of Tolerance Limits to the Characterization of Image Registration Performance.
IEEE Trans. Medical Imaging, 2014

Concurrent tumor segmentation and registration with uncertainty-based sparse non-uniform graphs.
Medical Image Anal., 2014

Probabilistic Diffeomorphic Registration: Representing Uncertainty.
Proceedings of the Biomedical Image Registration - 6th International Workshop, 2014

Gaussian Process Interpolation for Uncertainty Estimation in Image Registration.
Proceedings of the Medical Image Computing and Computer-Assisted Intervention - MICCAI 2014, 2014

Deformable Registration of Feature-Endowed Point Sets Based on Tensor Fields.
Proceedings of the 2014 IEEE Conference on Computer Vision and Pattern Recognition, 2014

2013
Efficient and robust model-to-image alignment using 3D scale-invariant features.
Medical Image Anal., 2013

Bayesian characterization of uncertainty in intra-subject non-rigid registration.
Medical Image Anal., 2013

Integration of the OpenIGTLink Network Protocol for Image-Guided Therapy with the Medical Platform MeVisLab.
CoRR, 2013

Automatic probe artifact detection in MRI-guided cryoablation.
Proceedings of the Medical Imaging 2013: Image-Guided Procedures, 2013

Inter-slice Correspondence for 2D Ultrasound-Guided Procedures.
Proceedings of the Clinical Image-Based Procedures. Translational Research in Medical Imaging, 2013

Validation of Catheter Segmentation for MR-Guided Gynecologic Cancer Brachytherapy.
Proceedings of the Medical Image Computing and Computer-Assisted Intervention - MICCAI 2013, 2013

Prototype Design and Phantom Evaluation of a Device for Co-registered MRI/TRUS Imaging of the Prostate.
Proceedings of the Clinical Image-Based Procedures. Translational Research in Medical Imaging, 2013

Multinomial Probabilistic Fiber Representation for Connectivity Driven Clustering.
Proceedings of the Information Processing in Medical Imaging, 2013

Feature-Based Alignment of Volumetric Multi-modal Images.
Proceedings of the Information Processing in Medical Imaging, 2013

Uncertainty-Driven Efficiently-Sampled Sparse Graphical Models for Concurrent Tumor Segmentation and Atlas Registration.
Proceedings of the IEEE International Conference on Computer Vision, 2013

2012
fMRI-DTI modeling via landmark distance atlases for prediction and detection of fiber tracts.
NeuroImage, 2012

Validating atlas-guided DOT: A comparison of diffuse optical tomography informed by atlas and subject-specific anatomies.
NeuroImage, 2012

Bayesian Characterization of Uncertainty in Multi-modal Image Registration.
Proceedings of the Biomedical Image Registration - 5th International Workshop, 2012

Identification of Recurrent Patterns in the Activation of Brain Networks.
Proceedings of the Advances in Neural Information Processing Systems 25: 26th Annual Conference on Neural Information Processing Systems 2012. Proceedings of a meeting held December 3-6, 2012

Robust non-rigid registration and characterization of uncertainty.
Proceedings of the 2012 IEEE Workshop on Mathematical Methods in Biomedical Image Analysis, 2012

A Feature-Based Developmental Model of the Infant Brain in Structural MRI.
Proceedings of the Medical Image Computing and Computer-Assisted Intervention - MICCAI 2012, 2012

Selection of Optimal Hyper-Parameters for Estimation of Uncertainty in MRI-TRUS Registration of the Prostate.
Proceedings of the Medical Image Computing and Computer-Assisted Intervention - MICCAI 2012, 2012

Unbiased Groupwise Registration of White Matter Tractography.
Proceedings of the Medical Image Computing and Computer-Assisted Intervention - MICCAI 2012, 2012

MRI Confirmed Prostate Tissue Classification with Laplacian Eigenmaps of Ultrasound RF Spectra.
Proceedings of the Machine Learning in Medical Imaging - Third International Workshop, 2012

Two solutions for registration of ultrasound to MRI for image-guided prostate interventions.
Proceedings of the Annual International Conference of the IEEE Engineering in Medicine and Biology Society, 2012

Fully automatic 3D segmentation of iceball for image-guided cryoablation.
Proceedings of the Annual International Conference of the IEEE Engineering in Medicine and Biology Society, 2012

2011
Estimation of Delivered Dose in Radiotherapy: The Influence of Registration Uncertainty.
Proceedings of the Medical Image Computing and Computer-Assisted Intervention - MICCAI 2011, 2011

Probabilistic non-rigid registration of prostate images: Modeling and quantifying uncertainty.
Proceedings of the 8th IEEE International Symposium on Biomedical Imaging: From Nano to Macro, 2011

Probabilistic Elastography: Estimating Lung Elasticity.
Proceedings of the Information Processing in Medical Imaging, 2011

State-Space Models of Mental Processes from fMRI.
Proceedings of the Information Processing in Medical Imaging, 2011

2010
Feature-based morphometry: Discovering group-related anatomical patterns.
NeuroImage, 2010

Anatomical atlas-guided diffuse optical tomography of brain activation.
NeuroImage, 2010

Segmentation of image ensembles via latent atlases.
Medical Image Anal., 2010

Combining spatial priors and anatomical information for fMRI detection.
Medical Image Anal., 2010

Bayesian Estimation of Deformation and Elastic Parameters in Non-rigid Registration.
Proceedings of the Biomedical Image Registration, 4th International Workshop, 2010

Validation of a nonrigid registration framework that accommodates tissue resection.
Proceedings of the Medical Imaging 2010: Image Processing, 2010

Summarizing and Visualizing Uncertainty in Non-rigid Registration.
Proceedings of the Medical Image Computing and Computer-Assisted Intervention, 2010

A mutual-information scale-space for image feature detection and feature-based classification of volumetric brain images.
Proceedings of the IEEE Conference on Computer Vision and Pattern Recognition, 2010

2009
Feature-Based Morphometry.
Proceedings of the Medical Image Computing and Computer-Assisted Intervention, 2009

Joint Segmentation of Image Ensembles via Latent Atlases.
Proceedings of the Medical Image Computing and Computer-Assisted Intervention, 2009

Atlas-Based Improved Prediction of Magnetic Field Inhomogeneity for Distortion Correction of EPI Data.
Proceedings of the Medical Image Computing and Computer-Assisted Intervention, 2009

Bayesian Registration via Local Image Regions: Information, Selection and Marginalization.
Proceedings of the Information Processing in Medical Imaging, 2009

A Non-rigid Registration Framework That Accommodates Resection and Retraction.
Proceedings of the Information Processing in Medical Imaging, 2009

On the optimality of mutual information as an image registration objective function.
Proceedings of the International Conference on Image Processing, 2009

SIFT-Rank: Ordinal description for invariant feature correspondence.
Proceedings of the 2009 IEEE Computer Society Conference on Computer Vision and Pattern Recognition (CVPR 2009), 2009

2008
A unified framework for clustering and quantitative analysis of white matter fiber tracts.
Medical Image Anal., 2008

Fieldmap-Free Retrospective Registration and Distortion Correction for EPI-Based Functional Imaging.
Proceedings of the Medical Image Computing and Computer-Assisted Intervention, 2008

Findings in Schizophrenia by Tract-Oriented DT-MRI Analysis.
Proceedings of the Medical Image Computing and Computer-Assisted Intervention, 2008

A mathematical framework for incorporating anatomical knowledge in DT-MRI analysis.
Proceedings of the 2008 IEEE International Symposium on Biomedical Imaging: From Nano to Macro, 2008

Monitoring slowly evolving tumors.
Proceedings of the 2008 IEEE International Symposium on Biomedical Imaging: From Nano to Macro, 2008

Modeling of anatomical information in clustering of white matter fiber trajectories using Dirichlet distribution.
Proceedings of the IEEE Conference on Computer Vision and Pattern Recognition, 2008

2007
A Hierarchical Algorithm for MR Brain Image Parcellation.
IEEE Trans. Medical Imaging, 2007

Displacement of brain regions in preterm infants with non-synostotic dolichocephaly investigated by MRI.
NeuroImage, 2007

Using the logarithm of odds to define a vector space on probabilistic atlases.
Medical Image Anal., 2007

MCMC Curve Sampling for Image Segmentation.
Proceedings of the Medical Image Computing and Computer-Assisted Intervention - MICCAI 2007, 10th International Conference, Brisbane, Australia, October 29, 2007

A Marginalized MAP Approach and EM Optimization for Pair-Wise Registration.
Proceedings of the Information Processing in Medical Imaging, 2007

Active Mean Fields: Solving the Mean Field Approximation in the Level Set Framework.
Proceedings of the Information Processing in Medical Imaging, 2007

Probabilistic Clustering and Quantitative Analysis of White Matter Fiber Tracts.
Proceedings of the Information Processing in Medical Imaging, 2007

2006
Automated segmentation of multiple sclerosis lesion subtypes with multichannel MRI.
NeuroImage, 2006

A Bayesian model for joint segmentation and registration.
NeuroImage, 2006

Multi-modal Image Registration Using Dirichlet-Encoded Prior Information.
Proceedings of the Biomedical Image Registration, Third International Workshop, 2006

Validation of Image Segmentation by Estimating Rater Bias and Variance.
Proceedings of the Medical Image Computing and Computer-Assisted Intervention, 2006

Logarithm Odds Maps for Shape Representation.
Proceedings of the Medical Image Computing and Computer-Assisted Intervention, 2006

Using surface normals to localize subdural intracranial electrodes placed during neurosurgery.
Proceedings of the 2006 IEEE International Symposium on Biomedical Imaging: From Nano to Macro, 2006

2005
Capturing intraoperative deformations: research experience at Brigham and Women's hospital.
Medical Image Anal., 2005

An EM algorithm for shape classification based on level sets.
Medical Image Anal., 2005

A Unifying Approach to Registration, Segmentation, and Intensity Correction.
Proceedings of the Medical Image Computing and Computer-Assisted Intervention, 2005

Combining Classifiers Using Their Receiver Operating Characteristics and Maximum Likelihood Estimation.
Proceedings of the Medical Image Computing and Computer-Assisted Intervention, 2005

Bayesian Population Modeling of Effective Connectivity.
Proceedings of the Information Processing in Medical Imaging, 2005

Efficient Population Registration of 3D Data.
Proceedings of the Computer Vision for Biomedical Image Applications, 2005

Shape Based Segmentation of Anatomical Structures in Magnetic Resonance Images.
Proceedings of the Computer Vision for Biomedical Image Applications, 2005

2004
Simultaneous truth and performance level estimation (STAPLE): an algorithm for the validation of image segmentation.
IEEE Trans. Medical Imaging, 2004

Mutual information in coupled multi-shape model for medical image segmentation.
Medical Image Anal., 2004

A Prospective Multi-institutional Study of the Reproducibility of fMRI: A Preliminary Report from the Biomedical Informatics Research Network.
Proceedings of the Medical Image Computing and Computer-Assisted Intervention -- MICCAI 2004, 2004

Level Set Methods in an EM Framework for Shape Classification and Estimation.
Proceedings of the Medical Image Computing and Computer-Assisted Intervention -- MICCAI 2004, 2004

Coupling Statistical Segmentation and PCA Shape Modeling.
Proceedings of the Medical Image Computing and Computer-Assisted Intervention -- MICCAI 2004, 2004

Automatic Optimization of Segmentation Algorithms Through Simultaneous Truth and Performance Level Estimation (STAPLE).
Proceedings of the Medical Image Computing and Computer-Assisted Intervention -- MICCAI 2004, 2004

Multiresolution Image Registration Based on Kullback-Leibler Distance.
Proceedings of the Medical Image Computing and Computer-Assisted Intervention -- MICCAI 2004, 2004

Exact MAP Activity Detection in f MRI Using a GLM with an Ising Spatial Prior.
Proceedings of the Medical Image Computing and Computer-Assisted Intervention -- MICCAI 2004, 2004

2D-3D Vascular Registration Between Digital Subtraction Angiographic (DSA) And Magnetic Resonance Angiographic (MRA) Images.
Proceedings of the 2004 IEEE International Symposium on Biomedical Imaging: From Nano to Macro, 2004

2003
A Shape-Based Approach to the Segmentation of Medical Imagery Using Level Sets.
IEEE Trans. Medical Imaging, 2003

A New Technique for Multi-modal 3D Image Registration.
Proceedings of the Biomedical Image Registration, Second International Workshop, 2003

Rigid Registration of Echoplanar and Conventional Magnetic Resonance Images by Minimizing the Kullback-Leibler Distance.
Proceedings of the Biomedical Image Registration, Second International Workshop, 2003

Holographic Video Display of Time-Series Volumetric Medical Data.
Proceedings of the 14th IEEE Visualization Conference, 2003

Augmenting intraoperative MRI with preoperative fMRI and DTI by biomechanical simulation of brain deformation.
Proceedings of the Medical Imaging 2003: Visualization, 2003

Exploratory Identification of Cardiac Noise in fMRI Images.
Proceedings of the Medical Image Computing and Computer-Assisted Intervention, 2003

Diffusion Tensor and Functional MRI Fusion with Anatomical MRI for Image-Guided Neurosurgery.
Proceedings of the Medical Image Computing and Computer-Assisted Intervention, 2003

A Navigation System for Augmenting Laparoscopic Ultrasound.
Proceedings of the Medical Image Computing and Computer-Assisted Intervention, 2003

Capturing Brain Deformation.
Proceedings of the Surgery Simulation and Soft Tissue Modeling, International Symposium, 2003

A Unified Statistical and Information Theoretic Framework for Multi-modal Image Registration.
Proceedings of the Information Processing in Medical Imaging, 2003

Coupled Multi-shape Model and Mutual Information for Medical Image Segmentation.
Proceedings of the Information Processing in Medical Imaging, 2003

A Unified Variational Approach to Denoising and Bias Correction in MR.
Proceedings of the Information Processing in Medical Imaging, 2003

Multi-modal image registration by minimizing Kullback-Leibler distance between expected and observed joint class histograms.
Proceedings of the 2003 IEEE Computer Society Conference on Computer Vision and Pattern Recognition (CVPR 2003), 2003

2002
Statistical Validation of Automated Probabilistic Segmentation against Composite Latent Expert Ground Truth in MR Imaging of Brain Tumors.
Proceedings of the Medical Image Computing and Computer-Assisted Intervention, 2002

Validation of Image Segmentation and Expert Quality with an Expectation-Maximization Algorithm.
Proceedings of the Medical Image Computing and Computer-Assisted Intervention, 2002

Performance Issues in Shape Classification.
Proceedings of the Medical Image Computing and Computer-Assisted Intervention, 2002

Incorporating Non-rigid Registration into Expectation Maximization Algorithm to Segment MR Images.
Proceedings of the Medical Image Computing and Computer-Assisted Intervention, 2002

Intra-patient Prone to Supine Colon Registration for Synchronized Virtual Colonoscopy.
Proceedings of the Medical Image Computing and Computer-Assisted Intervention, 2002

Multi-modal Image Registration by Minimising Kullback-Leibler Distance.
Proceedings of the Medical Image Computing and Computer-Assisted Intervention, 2002

Simultaneous validation of image segmentation and assessment of expert quality [tumor MRI application].
Proceedings of the 2002 IEEE International Symposium on Biomedical Imaging, 2002

2001
A Binary Entropy Measure to Assess Nonrigid Registration Algorithms.
Proceedings of the Medical Image Computing and Computer-Assisted Intervention, 2001

Fast Linear Elastic Matching Without Landmarks.
Proceedings of the Medical Image Computing and Computer-Assisted Intervention, 2001

Adaptive Entropy Rates for f MRI Time-Series Analysis.
Proceedings of the Medical Image Computing and Computer-Assisted Intervention, 2001

2D-3D Rigid Registration of X-Ray Fluoroscopy and CT Images Using Mutual Information and Sparsely Sampled Histogram Estimators.
Proceedings of the 2001 IEEE Computer Society Conference on Computer Vision and Pattern Recognition (CVPR 2001), 2001

Model-Based Curve Evolution Technique for Image Segmentation.
Proceedings of the 2001 IEEE Computer Society Conference on Computer Vision and Pattern Recognition (CVPR 2001), 2001

2000
Object Detection and Localization by Dynamic Template Warping.
Int. J. Comput. Vis., 2000

Incorporating Spatial Priors into an Information Theoretic Approach for <i>f</i>MRI Data Analysis.
Proceedings of the Medical Image Computing and Computer-Assisted Intervention, 2000

Simulation of Corticospinal Tract Displacement in Patients with Brain Tumors.
Proceedings of the Medical Image Computing and Computer-Assisted Intervention, 2000

1999
Analysis of Functional MRI Data Using Mutual Information.
Proceedings of the Medical Image Computing and Computer-Assisted Intervention, 1999

A Volumetric Optical Flow Method for Measurement of Brain Deformation from Intraoperative Magnetic Resonance Images.
Proceedings of the Medical Image Computing and Computer-Assisted Intervention, 1999

An Integrated Visualization System for Surgical Planning and Guidance Using Image Fusion and Interventional Imaging.
Proceedings of the Medical Image Computing and Computer-Assisted Intervention, 1999

1998
Enhanced Spatial Priors for Segmentation of Magnetic Resonance Imagery.
Proceedings of the Medical Image Computing and Computer-Assisted Intervention, 1998

Multimodality Deformable Registration of Pre- and Intraoperative Images for MRI-guided Brain Surgery.
Proceedings of the Medical Image Computing and Computer-Assisted Intervention, 1998

1997
Markov Random Field Segmentation of Brain MR Images.
IEEE Trans. Medical Imaging, 1997

Utilizing Segmented MRI Data in Image-Guided Surgery.
Int. J. Pattern Recognit. Artif. Intell., 1997

Statistical Approaches to Feature-Based Object Recognition.
Int. J. Comput. Vis., 1997

Alignment by Maximization of Mutual Information.
Int. J. Comput. Vis., 1997

Design considerations for a computer-vision-enabled ophthalmic augmented reality environment.
Proceedings of the CVRMed-MRCAS'97, 1997

1996
Adaptive segmentation of MRI data.
IEEE Trans. Medical Imaging, 1996

An automatic registration method for frameless stereotaxy, image guided surgery, and enhanced reality visualization.
IEEE Trans. Medical Imaging, 1996

Multi-modal volume registration by maximization of mutual information.
Medical Image Anal., 1996

Segmentation of brain tissue from magnetic resonance images.
Medical Image Anal., 1996

Image Guided Microscopic Surgery System Using Mutual-Information Based Registraion.
Proceedings of the Visualization in Biomedical Computing, 4th International Conference, 1996

1995
Evaluating and Validating an Automated Registration System for Enhanced Reality Visualization in Surgery.
Proceedings of the Computer Vision, 1995

1994
Statistical intensity correction and segmentation of MRI data.
Proceedings of the Visualization in Biomedical Computing 1994, 1994

Image guidance techniques for neurosurgery.
Proceedings of the Visualization in Biomedical Computing 1994, 1994

1993
Statistical object recognition.
PhD thesis, 1993

1991
MAP model matching.
Proceedings of the IEEE Computer Society Conference on Computer Vision and Pattern Recognition, 1991

1990
Massively parallel image restoration.
Proceedings of the IJCNN 1990, 1990

1989
Vision estimation of 3-D line segments from motion-a mobile robot vision system.
IEEE Trans. Robotics Autom., 1989

1987
Visual Estimation of 3-D Line Segments from Motion - A Mobile Robot Vision System.
Proceedings of the 6th National Conference on Artificial Intelligence. Seattle, 1987

1986
Efficient Synthesis of Gaussian Filters by Cascaded Uniform Filters.
IEEE Trans. Pattern Anal. Mach. Intell., 1986


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