Weizhong Li

According to our database, Weizhong Li authored at least 24 papers between 2000 and 2019.

Collaborative distances:

• Dijkstra number of four.
• Erdős number of four.

2019

Gclust: A Parallel Clustering Tool for Microbial Genomic Data.

Ruilin Li, Xiaoyu He, Chuangchuang Dai, Haidong Zhu, Xianyu Lang, Wei Chen, Xiaodong Li, Dan Zhao, Yu Zhang, Xinyin Han, Tie Niu, Yi Zhao, Rongqiang Cao, Rong He, Zhonghua Lu, Xuebin Chi, Weizhong Li, Beifang Niu

Genom. Proteom. Bioinform., 2019

DGCF: A Distributed Greedy Clustering Framework for Large-scale Genomic Sequences.

Zekun Yin, Xiaoming Xu, Kaichao Fan, Ruilin Li, Weizhong Li, Weiguo Liu, Beifang Niu

Proceedings of the 2019 IEEE International Conference on Bioinformatics and Biomedicine, 2019

2014

Big Data Applications Using Workflows for Data Parallel Computing.

Jianwu Wang, Daniel Crawl, Ilkay Altintas, Weizhong Li

Comput. Sci. Eng., 2014

2013

MGAviewer: a desktop visualization tool for analysis of metagenomics alignment data.

Zhengwei Zhu, Beifang Niu, Jing Chen, Sitao Wu, Shulei Sun, Weizhong Li

Bioinform., 2013

2012

CD-HIT: accelerated for clustering the next-generation sequencing data.

Limin Fu, Beifang Niu, Zhengwei Zhu, Sitao Wu, Weizhong Li

Bioinform., 2012

Ultrafast clustering algorithms for metagenomic sequence analysis.

Weizhong Li, Limin Fu, Beifang Niu, Sitao Wu, John C. Wooley

Briefings Bioinform., 2012

Challenges and approaches for distributed workflow-driven analysis of large-scale biological data: vision paper.

Ilkay Altintas, Jianwu Wang, Daniel Crawl, Weizhong Li

Proceedings of the 2012 Joint EDBT/ICDT Workshops, Berlin, Germany, March 30, 2012, 2012

2011

Community cyberinfrastructure for Advanced Microbial Ecology Research and Analysis: the CAMERA resource.

Shulei Sun, Jing Chen, Weizhong Li, Ilkay Altintas, Abel W. Lin, Steven Peltier, Karen I. Stocks, Eric E. Allen, Mark H. Ellisman, Jeffrey S. Grethe, John C. Wooley

Nucleic Acids Res., 2011

FR-HIT, a very fast program to recruit metagenomic reads to homologous reference genomes.

Beifang Niu, Zhengwei Zhu, Limin Fu, Sitao Wu, Weizhong Li

Bioinform., 2011

2010

Expansion of the Protein Repertoire in Newly Explored Environments: Human Gut Microbiome Specific Protein Families.

Kyle Ellrott, Lukasz Jaroszewski, Weizhong Li, John C. Wooley, Adam Godzik

PLoS Comput. Biol., 2010

Artificial and natural duplicates in pyrosequencing reads of metagenomic data.

Beifang Niu, Limin Fu, Shulei Sun, Weizhong Li

BMC Bioinform., 2010

CD-HIT Suite: a web server for clustering and comparing biological sequences.

Ying Huang, Beifang Niu, Ying Gao, Limin Fu, Weizhong Li

Bioinform., 2010

CAMERA 2.0: A Data-centric Metagenomics Community Infrastructure Driven by Scientific Workflows.

Ilkay Altintas, Abel W. Lin, Jing Chen, Chris Churas, Madhusudan Gujral, Shulei Sun, Weizhong Li, Ramil Manansala, Mayya Sedova, Jeffrey S. Grethe, Mark H. Ellisman

Proceedings of the 6th World Congress on Services, 2010

2009

Analysis and comparison of very large metagenomes with fast clustering and functional annotation.

Weizhong Li

BMC Bioinform., 2009

Identification of ribosomal RNA genes in metagenomic fragments.

Ying Huang, Paul Gilna, Weizhong Li

Bioinform., 2009

2008

Gene identification and protein classification in microbial metagenomic sequence data via incremental clustering.

Shibu Yooseph, Weizhong Li, Granger G. Sutton

BMC Bioinform., 2008

2006

A Fast Clustering Algorithm for Analyzing Highly Similar Compounds of Very Large Libraries.

Weizhong Li

J. Chem. Inf. Model., 2006

Cd-hit: a fast program for clustering and comparing large sets of protein or nucleotide sequences.

Weizhong Li, Adam Godzik

Bioinform., 2006

VISSA: a program to visualize structural features from structure sequence alignment.

Weizhong Li, Adam Godzik

Bioinform., 2006

2005

FFAS03: a server for profile-profile sequence alignments.

Lukasz Jaroszewski, Leszek Rychlewski, Zhanwen Li, Weizhong Li, Adam Godzik

Nucleic Acids Res., 2005

2003

A segment alignment approach to protein comparison.

Yuzhen Ye, Lukasz Jaroszewski, Weizhong Li, Adam Godzik

Bioinform., 2003

2002

Tolerating some redundancy significantly speeds up clustering of large protein databases.

Weizhong Li, Lukasz Jaroszewski, Adam Godzik

Bioinform., 2002

2001

Clustering of highly homologous sequences to reduce the size of large protein databases.

Weizhong Li, Lukasz Jaroszewski, Adam Godzik

Bioinform., 2001

2000

Saturated BLAST: an automated multiple intermediate sequence search used to detect distant homology.

Weizhong Li, Frederic Pio, Krzysztof Pawlowski, Adam Godzik

Bioinform., 2000