Weiwei Xue

Orcid: 0000-0002-3285-0574

According to our database1, Weiwei Xue authored at least 25 papers between 2012 and 2024.

Collaborative distances:
  • Dijkstra number2 of five.
  • Erdős number3 of four.

Timeline

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Bibliography

2024
Computational Chemistry in Structure-Based Solute Carrier Transporter Drug Design: Recent Advances and Future Perspectives.
J. Chem. Inf. Model., March, 2024

Structure-Based Discovery of the SARS-CoV-2 Main Protease Noncovalent Inhibitors from Traditional Chinese Medicine.
J. Chem. Inf. Model., February, 2024

MoDAFold: a strategy for predicting the structure of missense mutant protein based on AlphaFold2 and molecular dynamics.
Briefings Bioinform., January, 2024

CNSMolGen: A Bidirectional Recurrent Neural Network-Based Generative Model for De Novo Central Nervous System Drug Design.
J. Chem. Inf. Model., 2024

OPTICS: An interactive online platform for photosensory and bio-functional proteins in optogenetic systems.
Comput. Biol. Medicine, 2024

DTNPD: A comprehensive database of drugs and targets for neurological and psychiatric disorders.
Comput. Biol. Medicine, 2024

2023
Mapping synthetic binding proteins epitopes on diverse protein targets by protein structure prediction and protein-protein docking.
Comput. Biol. Medicine, September, 2023

Structure-Based Discovery of a Novel Allosteric Inhibitor against Human Dopamine Transporter.
J. Chem. Inf. Model., July, 2023

Unbiased molecular dynamics simulation of a first-in-class small molecule inhibitor binds to oncostatin M.
Comput. Biol. Medicine, March, 2023

2022
SYNBIP: synthetic binding proteins for research, diagnosis and therapy.
Nucleic Acids Res., 2022

Character embedding-based Bi-LSTM for Zircon similarity calculation with clustering.
Earth Sci. Informatics, 2022

2021
GIMICA: host genetic and immune factors shaping human microbiota.
Nucleic Acids Res., 2021

Structure-Based Discovery of Novel Nonpeptide Inhibitors Targeting SARS-CoV-2 Mpro.
J. Chem. Inf. Model., 2021

2020
Consistent gene signature of schizophrenia identified by a novel feature selection strategy from comprehensive sets of transcriptomic data.
Briefings Bioinform., 2020

A novel bioinformatics approach to identify the consistently well-performing normalization strategy for current metabolomic studies.
Briefings Bioinform., 2020

A critical assessment of the feature selection methods used for biomarker discovery in current metaproteomics studies.
Briefings Bioinform., 2020

ANPELA: analysis and performance assessment of the label-free quantification workflow for metaproteomic studies.
Briefings Bioinform., 2020

Clinical trials, progression-speed differentiating features and swiftness rule of the innovative targets of first-in-class drugs.
Briefings Bioinform., 2020

Protein functional annotation of simultaneously improved stability, accuracy and false discovery rate achieved by a sequence-based deep learning.
Briefings Bioinform., 2020

Convolutional neural network-based annotation of bacterial type IV secretion system effectors with enhanced accuracy and reduced false discovery.
Briefings Bioinform., 2020

Genome-wide identification and analysis of the eQTL lncRNAs in multiple sclerosis based on RNA-seq data.
Briefings Bioinform., 2020

2017
NOREVA: normalization and evaluation of MS-based metabolomics data.
Nucleic Acids Res., 2017

2014
Computational Study on the Drug Resistance Mechanism against HCV NS3/4A Protease Inhibitors Vaniprevir and MK-5172 by the Combination Use of Molecular Dynamics Simulation, Residue Interaction Network, and Substrate Envelope Analysis.
J. Chem. Inf. Model., 2014

2013
Exploring the Molecular Mechanism of Cross-Resistance to HIV-1 Integrase Strand Transfer Inhibitors by Molecular Dynamics Simulation and Residue Interaction Network Analysis.
J. Chem. Inf. Model., 2013

2012
Molecular mechanism of HIV-1 integrase-vDNA interactions and strand transfer inhibitor action: A molecular modeling perspective.
J. Comput. Chem., 2012


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