Wei Zhang

Orcid: 0000-0003-3605-9373

Affiliations:

University of Central Florida, Department of Computer Science / Genomics and Bioinformatics Cluster, FL, USA
University of Minnesota Twin Cities, Computer Science and Engineering Department, MN, USA (former)

According to our database¹, Wei Zhang authored at least 30 papers between 2010 and 2024.

Collaborative distances:

Dijkstra number² of four.
Erdős number³ of four.

Timeline

Legend:

Book

In proceedings

Article

PhD thesis

Dataset

Other

Bibliography

2024

A 65-nm RRAM Compute-in-Memory Macro for Genome Processing.

[BibT_eX]

[DOI]

IEEE J. Solid State Circuits, July, 2024

Integrating spatial transcriptomics and bulk RNA-seq: predicting gene expression with enhanced resolution through graph attention networks.

[BibT_eX]

[DOI]

Sudipto Baul

Khandakar Tanvir Ahmed

Briefings Bioinform., 2024

Feature Interaction Aware Automated Data Representation Transformation.

[BibT_eX]

[DOI]

Proceedings of the 2024 SIAM International Conference on Data Mining, 2024

2023

Aligner-D: Leveraging In-DRAM Computing to Accelerate DNA Short Read Alignment.

[BibT_eX]

[DOI]

IEEE J. Emerg. Sel. Topics Circuits Syst., March, 2023

Incomplete time-series gene expression in integrative study for islet autoimmunity prediction.

[BibT_eX]

[DOI]

Khandakar Tanvir Ahmed

Briefings Bioinform., January, 2023

Feature Cognition Enhancement via Interaction-Aware Automated Transformation.

[BibT_eX]

[DOI]

CoRR, 2023

Attention-Based Multi-modal Missing Value Imputation for Time Series Data with High Missing Rate.

[BibT_eX]

[DOI]

Khandakar Tanvir Ahmed

Sudipto Baul

Yanjie Fu

Wei Zhang

Proceedings of the 2023 SIAM International Conference on Data Mining, 2023

2022

APA-Scan: detection and visualization of 3′-UTR alternative polyadenylation with RNA-seq and 3′-end-seq data.

[BibT_eX]

[DOI]

Naima Ahmed Fahmi

Khandakar Tanvir Ahmed

BMC Bioinform., 2022

CancerCellTracker: a brightfield time-lapse microscopy framework for cancer drug sensitivity estimation.

[BibT_eX]

[DOI]

Khandakar Tanvir Ahmed

Raghunandan Reddy Alugubelli

Ariosto Siqueira Silva

Wei Zhang

Bioinform., 2022

2021

Multi-omics data integration by generative adversarial network.

[BibT_eX]

[DOI]

Khandakar Tanvir Ahmed

Bioinform., 2021

In silico model for miRNA-mediated regulatory network in cancer.

[BibT_eX]

[DOI]

Khandakar Tanvir Ahmed

Briefings Bioinform., 2021

Multi-Armed Bandit Based Feature Selection.

[BibT_eX]

[DOI]

Proceedings of the 2021 SIAM International Conference on Data Mining, 2021

PIM-Quantifier: A Processing-in-Memory Platform for mRNA Quantification.

[BibT_eX]

[DOI]

Proceedings of the 58th ACM/IEEE Design Automation Conference, 2021

2020

PANDA: Processing-in-MRAM Accelerated De Bruijn Graph based DNA Assembly.

[BibT_eX]

[DOI]

CoRR, 2020

Network-based multi-task learning models for biomarker selection and cancer outcome prediction.

[BibT_eX]

[DOI]

Bioinform., 2020

Platform-integrated mRNA isoform quantification.

[BibT_eX]

[DOI]

Bioinform., 2020

Exploring DNA Alignment-in-Memory Leveraging Emerging SOT-MRAM.

[BibT_eX]

[DOI]

Shaahin Angizi

Wei Zhang

Deliang Fan

Proceedings of the GLSVLSI '20: Great Lakes Symposium on VLSI 2020, 2020

PIM-Aligner: A Processing-in-MRAM Platform for Biological Sequence Alignment.

[BibT_eX]

[DOI]

Proceedings of the 2020 Design, Automation & Test in Europe Conference & Exhibition, 2020

PIM-Assembler: A Processing-in-Memory Platform for Genome Assembly.

[BibT_eX]

[DOI]

Proceedings of the 57th ACM/IEEE Design Automation Conference, 2020

2019

Learning a Low-Rank Tensor of Pharmacogenomic Multi-relations from Biomedical Networks.

[BibT_eX]

[DOI]

Proceedings of the 2019 IEEE International Conference on Data Mining, 2019

GraphS: A Graph Processing Accelerator Leveraging SOT-MRAM.

[BibT_eX]

[DOI]

Proceedings of the Design, Automation & Test in Europe Conference & Exhibition, 2019

AlignS: A Processing-In-Memory Accelerator for DNA Short Read Alignment Leveraging SOT-MRAM.

[BibT_eX]

[DOI]

Proceedings of the 56th Annual Design Automation Conference 2019, 2019

2017

Low-rank Label Propagation for Semi-supervised Learning with 100 Millions Samples.

[BibT_eX]

[DOI]

CoRR, 2017

2015

Network-Based Isoform Quantification with RNA-Seq Data for Cancer Transcriptome Analysis.

[BibT_eX]

[DOI]

PLoS Comput. Biol., 2015

2014

Network-based Transcript Quantification with RNA-Seq Data.

[BibT_eX]

[DOI]

CoRR, 2014

2013

Network-based Survival Analysis Reveals Subnetwork Signatures for Predicting Outcomes of Ovarian Cancer Treatment.

[BibT_eX]

[DOI]

PLoS Comput. Biol., 2013

2012

Signed network propagation for detecting differential gene expressions and DNA copy number variations.

[BibT_eX]

[DOI]

Proceedings of the ACM International Conference on Bioinformatics, 2012

2011

Inferring Disease and Gene Set Associations with Rank Coherence in Networks

[BibT_eX]

[DOI]

CoRR, 2011

Inferring disease and gene set associations with rank coherence in networks.

[BibT_eX]

[DOI]

Bioinform., 2011

2010

Network propagation models for gene selection.

[BibT_eX]

[DOI]

Proceedings of the 2010 IEEE International Workshop on Genomic Signal Processing and Statistics, 2010

Wei Zhang

Timeline

Legend:

Links

Online presence:

On csauthors.net:

Bibliography

Loading...