Volkhard Helms
Orcid: 0000-0002-2180-9154Affiliations:
- Saarland University, Saarbrücken, Germany
According to our database1,
Volkhard Helms
authored at least 37 papers
between 1997 and 2022.
Collaborative distances:
Collaborative distances:
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on orcid.org
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on id.loc.gov
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on d-nb.info
On csauthors.net:
Bibliography
2022
Optimized Data Set and Feature Construction for Substrate Prediction of Membrane Transporters.
J. Chem. Inf. Model., 2022
2021
ProPores2: Web Service and Stand-Alone Tool for Identifying, Manipulating, and Visualizing Pores in Protein Structures.
J. Chem. Inf. Model., 2021
Frontiers Bioinform., 2021
Detecting Rewiring Events in Protein-Protein Interaction Networks Based on Transcriptomic Data.
Frontiers Bioinform., 2021
2020
CoRR, 2020
TFmiR2: constructing and analyzing disease-, tissue- and process-specific transcription factor and microRNA co-regulatory networks.
Bioinform., 2020
2019
BMC Bioinform., 2019
BMC Bioinform., 2019
2018
MutaNET: a tool for automated analysis of genomic mutations in gene regulatory networks.
Bioinform., 2018
2017
Randomization Strategies Affect Motif Significance Analysis in TF-miRNA-Gene Regulatory Networks.
J. Integr. Bioinform., 2017
Rewiring of the inferred protein interactome during blood development studied with the tool PPICompare.
BMC Syst. Biol., 2017
2016
PreTIS: A Tool to Predict Non-canonical 5' UTR Translational Initiation Sites in Human and Mouse.
PLoS Comput. Biol., 2016
BMC Syst. Biol., 2016
PPIXpress: construction of condition-specific protein interaction networks based on transcript expression.
Bioinform., 2016
2015
TFmiR: a web server for constructing and analyzing disease-specific transcription factor and miRNA co-regulatory networks.
Nucleic Acids Res., 2015
J. Chem. Inf. Model., 2015
2014
AKSmooth: Enhancing low-coverage bisulfite sequencing data via kernel-based smoothing.
J. Bioinform. Comput. Biol., 2014
2013
BMC Syst. Biol., 2013
Transferring functional annotations of membrane transporters on the basis of sequence similarity and sequence motifs.
BMC Bioinform., 2013
2011
Prediction of the Exposure Status of transmembrane beta Barrel residues from protein Sequence.
J. Bioinform. Comput. Biol., 2011
Statistical analysis and exposure status classification of transmembrane beta barrel residues.
Comput. Biol. Chem., 2011
2010
Classifying Substrate Specificities of Membrane Transporters from <i>Arabidopsis thaliana</i>.
J. Chem. Inf. Model., 2010
Graph-theoretical identification of dissociation pathways on free energy landscapes of biomolecular interaction.
J. Comput. Chem., 2010
2009
What induces pocket openings on protein surface patches involved in protein-protein interactions?
J. Comput. Aided Mol. Des., 2009
2008
MINS2: Revisiting the molecular code for transmembrane-helix recognition by the Sec61 translocon.
Bioinform., 2008
Prediction of the translocon-mediated membrane insertion free energies of protein sequences.
Bioinform., 2008
Proceedings of the German Conference on Bioinformatics, 2008
2007
Prediction of the burial status of transmembrane residues of helical membrane proteins.
BMC Bioinform., 2007
On the derivation of propensity scales for predicting exposed transmembrane residues of helical membrane proteins.
Bioinform., 2007
Proceedings of the German Conference on Bioinformatics, 2007
2006
Energy barriers of proton transfer reactions between amino acid side chain analogs and water from ab initio calculations.
J. Comput. Chem., 2006
1999
Proceedings of the Computational Molecular Dynamics: Challenges, Methods, Ideas, 1999
1997
Free energies of hydration from thermodynamic integration: Comparison of molecular mechanics force fields and evaluation of calculation accuracy.
J. Comput. Chem., 1997