Vladimir Gligorijevic

According to our database, Vladimir Gligorijevic authored at least 20 papers between 2012 and 2024.

Collaborative distances:

• Dijkstra number of five.
• Erdős number of four.

2024

Implicitly Guided Design with PropEn: Match your Data to Follow the Gradient.

Natasa Tagasovska, Vladimir Gligorijevic, Kyunghyun Cho, Andreas Loukas

CoRR, 2024

Protein Discovery with Discrete Walk-Jump Sampling.

Nathan C. Frey, Daniel Berenberg, Karina Zadorozhny, Joseph Kleinhenz, Julien Lafrance-Vanasse, Isidro Hötzel, Yan Wu, Stephen Ra, Richard Bonneau, Kyunghyun Cho, Andreas Loukas, Vladimir Gligorijevic, Saeed Saremi

Proceedings of the Twelfth International Conference on Learning Representations, 2024

2023

TCRconv: predicting recognition between T cell receptors and epitopes using contextualized motifs.

Emmi Jokinen, Alexandru Dumitrescu, Jani Huuhtanen, Vladimir Gligorijevic, Satu Mustjoki, Richard Bonneau, Markus Heinonen, Harri Lähdesmäki

Bioinform., January, 2023

AbDiffuser: full-atom generation of in-vitro functioning antibodies.

Karolis Martinkus, Jan Ludwiczak, Wei-Ching Liang, Julien Lafrance-Vanasse, Isidro Hötzel, Arvind Rajpal, Yan Wu, Kyunghyun Cho, Richard Bonneau, Vladimir Gligorijevic, Andreas Loukas

Proceedings of the Advances in Neural Information Processing Systems 36: Annual Conference on Neural Information Processing Systems 2023, 2023

2022

A Pareto-optimal compositional energy-based model for sampling and optimization of protein sequences.

Natasa Tagasovska, Nathan C. Frey, Andreas Loukas, Isidro Hötzel, Julien Lafrance-Vanasse, Ryan Lewis Kelly, Yan Wu, Arvind Rajpal, Richard Bonneau, Kyunghyun Cho, Stephen Ra, Vladimir Gligorijevic

CoRR, 2022

PropertyDAG: Multi-objective Bayesian optimization of partially ordered, mixed-variable properties for biological sequence design.

Ji Won Park, Samuel Stanton, Saeed Saremi, Andrew M. Watkins, Henri Dwyer, Vladimir Gligorijevic, Richard Bonneau, Stephen Ra, Kyunghyun Cho

CoRR, 2022

Multi-segment preserving sampling for deep manifold sampler.

Daniel Berenberg, Jae Hyeon Lee, Simon Kelow, Ji Won Park, Andrew M. Watkins, Vladimir Gligorijevic, Richard Bonneau, Stephen Ra, Kyunghyun Cho

CoRR, 2022

2021

NetQuilt: deep multispecies network-based protein function prediction using homology-informed network similarity.

Meet Barot, Vladimir Gligorijevic, Kyunghyun Cho, Richard Bonneau

Bioinform., 2021

2019

Non-Negative Matrix Factorizations for Multiplex Network Analysis.

Vladimir Gligorijevic, Yannis Panagakis, Stefanos Zafeiriou

IEEE Trans. Pattern Anal. Mach. Intell., 2019

2018

deepNF: deep network fusion for protein function prediction.

Vladimir Gligorijevic, Meet Barot, Richard Bonneau

Bioinform., 2018

2017

Methods for analysis and integration of heterogeneous network data.

Vladimir Gligorijevic

PhD thesis, 2017

2016

Fuse: multiple network alignment via data fusion.

Vladimir Gligorijevic, Noël Malod-Dognin, Natasa Przulj

Bioinform., 2016

Patient-Specific Data Fusion for Cancer Stratification and Personalised Treatment.

Vladimir Gligorijevic, Noël Malod-Dognin, Natasa Przulj

Proceedings of the Biocomputing 2016: Proceedings of the Pacific Symposium, 2016

Fusion and community detection in multi-layer graphs.

Vladimir Gligorijevic, Yannis Panagakis, Stefanos Zafeiriou

Proceedings of the 23rd International Conference on Pattern Recognition, 2016

2014

The Dynamics of Emotional Chats with Bots: Experiment and Agent-Based Simulations.

Bosiljka Tadic, Vladimir Gligorijevic, Marcin Skowron, Milovan Suvakov

CoRR, 2014

Integration of molecular network data reconstructs Gene Ontology.

Vladimir Gligorijevic, Vuk Janjic, Natasa Przulj

Bioinform., 2014

2013

Co-Evolutionary Mechanisms of Emotional Bursts in Online Social Dynamics and Networks.

Bosiljka Tadic, Vladimir Gligorijevic, Marija Mitrovic, Milovan Suvakov

Entropy, 2013

2012

Structure and stability of online chat networks built on emotion-carrying links

Vladimir Gligorijevic, Marcin Skowron, Bosiljka Tadic

CoRR, 2012

How the online social networks are used: Dialogs-based structure of MySpace

Milovan Suvakov, Marija Mitrovic, Vladimir Gligorijevic, Bosiljka Tadic

CoRR, 2012

Directed Networks of Online Chats: Content-Based Linking and Social Structure.

Vladimir Gligorijevic, Marcin Skowron, Bosiljka Tadic

Proceedings of the Eighth International Conference on Signal Image Technology and Internet Based Systems, 2012