Vlad Mihai Sima

According to our database, Vlad Mihai Sima authored at least 28 papers between 2007 and 2018.

Collaborative distances:

• Dijkstra number of three.
• Erdős number of three.

2018

Hardware acceleration of BWA-MEM genomic short read mapping for longer read lengths.

Ernst Joachim Houtgast, Vlad Mihai Sima, Koen Bertels, Zaid Al-Ars

Comput. Biol. Chem., 2018

Comparative Analysis of System-Level Acceleration Techniques in Bioinformatics: A Case Study of Accelerating the Smith-Waterman Algorithm for BWA-MEM.

Ernst Joachim Houtgast, Vlad Mihai Sima, Koen Bertels, Zaid Al-Ars

Proceedings of the 18th IEEE International Conference on Bioinformatics and Bioengineering, 2018

2017

High Performance Streaming Smith-Waterman Implementation with Implicit Synchronization on Intel FPGA using OpenCL.

Ernst Houtgast, Vlad Mihai Sima, Zaid Al-Ars

Proceedings of the 17th IEEE International Conference on Bioinformatics and Bioengineering, 2017

2016

A Survey and Evaluation of FPGA High-Level Synthesis Tools.

Razvan Nane, Vlad Mihai Sima, Christian Pilato, Jongsok Choi, Blair Fort, Andrew Canis, Yu Ting Chen, Hsuan Hsiao, Stephen Dean Brown, Fabrizio Ferrandi, Jason Helge Anderson, Koen Bertels

IEEE Trans. Comput. Aided Des. Integr. Circuits Syst., 2016

An Efficient GPUAccelerated Implementation of Genomic Short Read Mapping with BWAMEM.

Ernst Joachim Houtgast, Vlad Mihai Sima, Koen Bertels, Zaid Al-Ars

SIGARCH Comput. Archit. News, 2016

Power-efficiency analysis of accelerated BWA-MEM implementations on heterogeneous computing platforms.

Ernst Joachim Houtgast, Vlad Mihai Sima, Giacomo Marchiori, Koen Bertels, Zaid Al-Ars

Proceedings of the International Conference on ReConFigurable Computing and FPGAs, 2016

Power-Efficient Accelerated Genomic Short Read Mapping on Heterogeneous Computing Platforms.

Ernst Joachim Houtgast, Vlad Mihai Sima, Giacomo Marchiori, Koen Bertels, Zaid Al-Ars

Proceedings of the 24th IEEE Annual International Symposium on Field-Programmable Custom Computing Machines, 2016

GPU-Accelerated BWA-MEM Genomic Mapping Algorithm Using Adaptive Load Balancing.

Ernst Joachim Houtgast, Vlad Mihai Sima, Koen Bertels, Zaid Al-Ars

Proceedings of the Architecture of Computing Systems - ARCS 2016, 2016

2015

An FPGA-based systolic array to accelerate the BWA-MEM genomic mapping algorithm.

Ernst Joachim Houtgast, Vlad Mihai Sima, Koen Bertels, Zaid Al-Ars

Proceedings of the 2015 International Conference on Embedded Computer Systems: Architectures, 2015

Heterogeneous Hardware/Software Acceleration of the BWA-MEM DNA Alignment Algorithm.

Nauman Ahmed, Vlad Mihai Sima, Ernst Houtgast, Koen Bertels, Zaid Al-Ars

Proceedings of the IEEE/ACM International Conference on Computer-Aided Design, 2015

FPGA acceleration of the pair-HMMs forward algorithm for DNA sequence analysis.

Shanshan Ren, Vlad Mihai Sima, Zaid Al-Ars

Proceedings of the 2015 IEEE International Conference on Bioinformatics and Biomedicine, 2015

2014

FPGA-accelerated Monte-Carlo integration using stratified sampling and Brownian bridges.

Mark de Jong, Vlad Mihai Sima, Koen Bertels, David Thomas

Proceedings of the 2014 International Conference on Field-Programmable Technology, 2014

High-Level Synthesis in the Delft Workbench Hardware/Software Co-design Tool-Chain.

Razvan Nane, Vlad Mihai Sima, Cuong Pham-Quoc, Fernando M. Gonçalves, Koen Bertels

Proceedings of the 12th IEEE International Conference on Embedded and Ubiquitous Computing, 2014

DRuiD: Designing reconfigurable architectures with decision-making support.

Giovanni Mariani, Gianluca Palermo, Roel Meeuws, Vlad Mihai Sima, Cristina Silvano, Koen Bertels

Proceedings of the 19th Asia and South Pacific Design Automation Conference, 2014

2013

Quipu: A Statistical Model for Predicting Hardware Resources.

Roel Meeuws, Sayyed Arash Ostadzadeh, Carlo Galuzzi, Vlad Mihai Sima, Razvan Nane, Koen Bertels

ACM Trans. Reconfigurable Technol. Syst., 2013

Run-time optimization of a dynamically reconfigurable embedded system through performance prediction.

Giovanni Mariani, Vlad Mihai Sima, Gianluca Palermo, Vittorio Zaccaria, Giacomo Marchiori, Cristina Silvano, Koen Bertels

Proceedings of the 23rd International Conference on Field programmable Logic and Applications, 2013

2012

Compiler Assisted Runtime Adaptation.

Vlad Mihai Sima

PhD thesis, 2012

A lightweight speculative and predicative scheme for hardware execution.

Razvan Nane, Vlad Mihai Sima, Koen Bertels

Proceedings of the 2012 International Conference on Reconfigurable Computing and FPGAs, 2012

Area constraint propagation in high level synthesis.

Razvan Nane, Vlad Mihai Sima, Koen Bertels

Proceedings of the 2012 International Conference on Field-Programmable Technology, 2012

DWARV 2.0: A CoSy-based C-to-VHDL hardware compiler.

Razvan Nane, Vlad Mihai Sima, Bryan Olivier, Roel Meeuws, Yana Yankova, Koen Bertels

Proceedings of the 22nd International Conference on Field Programmable Logic and Applications (FPL), 2012

Using multi-objective design space exploration to enable run-time resource management for reconfigurable architectures.

Giovanni Mariani, Vlad Mihai Sima, Gianluca Palermo, Vittorio Zaccaria, Cristina Silvano, Koen Bertels

Proceedings of the 2012 Design, Automation & Test in Europe Conference & Exhibition, 2012

2011

IP-XACT extensions for Reconfigurable Computing.

Razvan Nane, Sven van Haastregt, Todor P. Stefanov, Bart Kienhuis, Vlad Mihai Sima, Koen Bertels

Proceedings of the 22nd IEEE International Conference on Application-specific Systems, 2011

2010

HArtes: Hardware-Software Codesign for Heterogeneous Multicore Platforms.

Koen Bertels, Vlad Mihai Sima, Yana Yankova, Georgi Kuzmanov, Wayne Luk, José Gabriel F. Coutinho, Fabrizio Ferrandi, Christian Pilato, Marco Lattuada, Donatella Sciuto, Andrea Michelotti

IEEE Micro, 2010

2009

Runtime Memory Allocation in a Heterogeneous Reconfigurable Platform.

Vlad Mihai Sima, Koen Bertels

Proceedings of the ReConFig'09: 2009 International Conference on Reconfigurable Computing and FPGAs, 2009

Runtime decision of hardware or software execution on a heterogeneous reconfigurable platform.

Vlad Mihai Sima, Koen Bertels

Proceedings of the 23rd IEEE International Symposium on Parallel and Distributed Processing, 2009

Compiler assisted runtime task scheduling on a reconfigurable computer.

Mojtaba Sabeghi, Vlad Mihai Sima, Koen Bertels

Proceedings of the 19th International Conference on Field Programmable Logic and Applications, 2009

2008

Resource allocation algorithm and OpenMP extensions for parallel execution on a heterogeneous reconfigurable platform.

Vlad Mihai Sima, Elena Moscu Panainte, Koen Bertels

Proceedings of the FPL 2008, 2008

2007

HARTES Toolchain Early Evaluation: Profiling, Compilation and HDL Generation.

Koen Bertels, Georgi Kuzmanov, Elena Moscu Panainte, Georgi Gaydadjiev, Yana Yankova, Vlad Mihai Sima, Kamana Sigdel, Roel Meeuws, Stamatis Vassiliadis

Proceedings of the FPL 2007, 2007