Vindi M. Jayasinghe-Arachchige

According to our database, Vindi M. Jayasinghe-Arachchige authored at least 6 papers between 2019 and 2024.

Collaborative distances:

• Dijkstra number of five.
• Erdős number of four.

2024

Identification of Family-Specific Features in Cas9 and Cas12 Proteins: A Machine Learning Approach Using Complete Protein Feature Spectrum.

Sita Sirisha Madugula, Pranav Pujar, Bharani Nammi, Shouyi Wang, Vindi M. Jayasinghe-Arachchige, Tyler Pham, Dominic Mashburn, Maria Artiles, Jin Liu

J. Chem. Inf. Model., 2024

2023

Leveraging QM/MM and Molecular Dynamics Simulations to Decipher the Reaction Mechanism of the Cas9 HNH Domain to Investigate Off-Target Effects.

Yazdan Maghsoud, Vindi M. Jayasinghe-Arachchige, Pratibha Kumari, G. Andrés Cisneros, Jin Liu

J. Chem. Inf. Model., November, 2023

2022

Promiscuous Catalytic Activity of a Binuclear <i>Metallohydrolase</i>: Peptide and Phosphoester Hydrolyses.

Leonardo F. Serafim, Vindi M. Jayasinghe-Arachchige, Lukun Wang, Rajeev Prabhakar

J. Chem. Inf. Model., 2022

2021

Degradation of a Main Plastic Pollutant Polyethylene Terephthalate by Two Distinct Proteases (Neprilysin and Cutinase-like Enzyme).

Qiaoyu Hu, Vindi M. Jayasinghe-Arachchige, Rajeev Prabhakar

J. Chem. Inf. Model., 2021

Allosteric Modulation of Small Molecule Drugs on ACE2 Conformational Change upon Binding to SARS-CoV-2 Spike Protein.

Duen-Shian Wang, Hamed S. Hayatshahi, Vindi M. Jayasinghe-Arachchige, Jin Liu

Proceedings of the IEEE International Conference on Bioinformatics and Biomedicine, 2021

2019

Hydrolysis of chemically distinct sites of human serum albumin by polyoxometalate: A hybrid QM/MM (ONIOM) study.

Vindi M. Jayasinghe-Arachchige, Qiaoyu Hu, Gaurav Sharma, Thomas J. Paul, Marcus Lundberg, David Quiñonero, Tatjana N. Parac-Vogt, Rajeev Prabhakar

J. Comput. Chem., 2019