Vida Ravanmehr

According to our database, Vida Ravanmehr authored at least 22 papers between 2009 and 2023.

Collaborative distances:

• Dijkstra number of four.
• Erdős number of three.

2023

GRAPE for fast and scalable graph processing and random-walk-based embedding.

Luca Cappelletti, Tommaso Fontana, Elena Casiraghi, Vida Ravanmehr, Tiffany J. Callahan, Carlos Cano, Marcin P. Joachimiak, Christopher J. Mungall, Peter N. Robinson, Justin T. Reese, Giorgio Valentini

Nat. Comput. Sci., 2023

KG-Hub - Building and Exchanging Biological Knowledge Graphs.

J. Harry Caufield, Tim E. Putman, Kevin Schaper, Deepak R. Unni, Harshad Hegde, Tiffany J. Callahan, Luca Cappelletti, Sierra A. T. Moxon, Vida Ravanmehr, Seth Carbon, Lauren E. Chan, Katherina Cortes, Kent A. Shefchek, Glass Elsarboukh, James P. Balhoff, Tommaso Fontana, Nicolas Matentzoglu, Richard M. Bruskiewich, Anne E. Thessen, Nomi L. Harris, Monica C. Munoz-Torres, Melissa A. Haendel, Peter N. Robinson, Marcin P. Joachimiak, Christopher J. Mungall, Justin T. Reese

CoRR, 2023

2021

KG-COVID-19: A Framework to Produce Customized Knowledge Graphs for COVID-19 Response.

Justin T. Reese, Deepak R. Unni, Tiffany J. Callahan, Luca Cappelletti, Vida Ravanmehr, Seth Carbon, Kent A. Shefchek, Benjamin M. Good, James P. Balhoff, Tommaso Fontana, Hannah Blau, Nicolas Matentzoglu, Nomi L. Harris, Monica C. Munoz-Torres, Melissa A. Haendel, Peter N. Robinson, Marcin P. Joachimiak, Christopher J. Mungall

Patterns, 2021

GraPE: fast and scalable Graph Processing and Embedding.

Luca Cappelletti, Tommaso Fontana, Elena Casiraghi, Vida Ravanmehr, Tiffany J. Callahan, Marcin P. Joachimiak, Christopher J. Mungall, Peter N. Robinson, Justin T. Reese, Giorgio Valentini

CoRR, 2021

Het-node2vec: second order random walk sampling for heterogeneous multigraphs embedding.

Giorgio Valentini, Elena Casiraghi, Luca Cappelletti, Vida Ravanmehr, Tommaso Fontana, Justin T. Reese, Peter N. Robinson

CoRR, 2021

2020

The Monarch Initiative in 2019: an integrative data and analytic platform connecting phenotypes to genotypes across species.

Kent A. Shefchek, Nomi L. Harris, Michael A. Gargano, Nicolas Matentzoglu, Deepak R. Unni, Matthew H. Brush, Dan Keith, Tom Conlin, Nicole A. Vasilevsky, Xingmin Aaron Zhang, James P. Balhoff, Larry Babb, Susan M. Bello, Hannah Blau, Yvonne M. Bradford, Seth Carbon, Leigh Carmody, Lauren E. Chan, Valentina Cipriani, Alayne Cuzick, Maria G. Della Rocca, Nathan A. Dunn, Shahim Essaid, Petra Fey, Christian A. Grove, Jean-Philippe F. Gourdine, Ada Hamosh, Midori A. Harris, Ingo Helbig, Maureen E. Hoatlin, Marcin P. Joachimiak, Simon Jupp, Kenneth B. Lett, Suzanna E. Lewis, Craig McNamara, Zoë May Pendlington, Clare Pilgrim, Tim E. Putman, Vida Ravanmehr, Justin T. Reese, Erin Rooney Riggs, Sofia M. C. Robb, Paola Roncaglia, James Seager, Erik Segerdell, Morgan Similuk, Andrea L. Storm, Courtney Thaxon, Anne E. Thessen, Julius O. B. Jacobsen, Julie A. McMurry, Tudor Groza, Sebastian Köhler, Damian Smedley, Peter N. Robinson, Christopher J. Mungall, Melissa A. Haendel, Monica C. Munoz-Torres, David Osumi-Sutherland

Nucleic Acids Res., 2020

2019

Semantic integration of clinical laboratory tests from electronic health records for deep phenotyping and biomarker discovery.

Xingmin Aaron Zhang, Amy Yates, Nicole A. Vasilevsky, Jean-Philippe F. Gourdine, Tiffany J. Callahan, Leigh C. Carmody, Daniel Danis, Marcin P. Joachimiak, Vida Ravanmehr, Emily R. Pfaff, James Champion, Kimberly Robasky, Hao Xu, Karamarie Fecho, Nephi A. Walton, Richard L. Zhu, Justin Ramsdill, Christopher J. Mungall, Sebastian Köhler, Melissa A. Haendel, Clement J. McDonald, Daniel J. Vreeman, David B. Peden, Tellen D. Bennett, James A. Feinstein, Blake Martin, Adrianne L. Stefanski, Lawrence E. Hunter, Christopher G. Chute, Peter N. Robinson

npj Digit. Medicine, 2019

2018

Paired threshold graphs.

Vida Ravanmehr, Gregory J. Puleo, Sadegh Bolouki, Olgica Milenkovic

Discret. Appl. Math., 2018

ChIPWig: a random access-enabling lossless and lossy compression method for ChIP-seq data.

Vida Ravanmehr, Minji Kim, Zhiying Wang, Olgica Milenkovic

Bioinform., 2018

2016

Check-hybrid GLDPC codes: Systematic elimination of trapping sets and guaranteed error correction capability.

Vida Ravanmehr, Mehrdad Khatami, David Declercq, Bane Vasic

Trans. Emerg. Telecommun. Technol., 2016

Doubly threshold graphs for social network modeling.

Vida Ravanmehr, Sadegh Bolouki, Gregory J. Puleo, Olgica Milenkovic

Proceedings of the 2016 IEEE Information Theory Workshop, 2016

2015

Codes on Graphs and Analysis of Iterative Algorithms for Reconstructing Sparse Signals and Decoding of Check-Hybrid GLDPC Codes.

Vida Ravanmehr

PhD thesis, 2015

Fault-resilient decoders and memories made of unreliable components.

Bane Vasic, Predrag Ivanis, Srdan Brkic, Vida Ravanmehr

Proceedings of the 2015 Information Theory and Applications Workshop, 2015

2014

Check-hybrid GLDPC codes without small trapping sets.

Vida Ravanmehr, David Declercq, Bane Vasic

Proceedings of the 2014 Information Theory and Applications Workshop, 2014

Check-hybrid GLDPC codes: Systematic elimination of trapping sets by super checks.

Vida Ravanmehr, David Declercq, Bane Vasic

Proceedings of the 2014 IEEE International Symposium on Information Theory, Honolulu, HI, USA, June 29, 2014

GBP-based detection and symmetric information rate for rectangular-grain TDMR model.

Mehrdad Khatami, Vida Ravanmehr, Bane Vasic

Proceedings of the 2014 IEEE International Symposium on Information Theory, Honolulu, HI, USA, June 29, 2014

2012

An Information Theoretic Approach to Constructing Robust Boolean Gene Regulatory Networks.

Bane Vasic, Vida Ravanmehr, Anantha Raman Krishnan

IEEE ACM Trans. Comput. Biol. Bioinform., 2012

Interval-Passing Algorithm for Non-Negative Measurement Matrices: Performance and Reconstruction Analysis.

Vida Ravanmehr, Ludovic Danjean, Bane Vasic, David Declercq

IEEE J. Emerg. Sel. Topics Circuits Syst., 2012

Signal recovery performance of the interval-passing algorithm.

Vida Ravanmehr, Ludovic Danjean, Bane Vasic, David Declercq

Proceedings of the 7th International Symposium on Turbo Codes and Iterative Information Processing, 2012

Quasi-cyclic codes exhibiting the gene regulatory network of the cell cycle.

Vida Ravanmehr, Bane Vasic

Proceedings of the 2012 IEEE Symposium on Computational Intelligence in Bioinformatics and Computational Biology, 2012

2011

On iterative compressed sensing reconstruction of sparse non-negative vectors.

Vida Ravanmehr, Ludovic Danjean, David Declercq, Bane Vasic

Proceedings of the 4th International Symposium on Applied Sciences in Biomedical and Communication Technologies, 2011

2009

Two Classes of Optimal Stopping Redundancy Codes.

Morteza Esmaeili, Vida Ravanmehr

Ars Comb., 2009