Venkata P. Satagopam

Orcid: 0000-0002-6532-5880

According to our database1, Venkata P. Satagopam authored at least 32 papers between 2008 and 2024.

Collaborative distances:
  • Dijkstra number2 of four.
  • Erdős number3 of four.

Timeline

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Bibliography

2024
BioKC: a collaborative platform for curation and annotation of molecular interactions.
Database J. Biol. Databases Curation, January, 2024

2023
Analysis: Flawed Datasets of Monkeypox Skin Images.
J. Medical Syst., December, 2023

A guide for developing comprehensive systems biology maps of disease mechanisms: planning, construction and maintenance.
Frontiers Bioinform., May, 2023

Visualization of automatically combined disease maps and pathway diagrams for rare diseases.
Frontiers Bioinform., May, 2023

Experiences From FAIRifying Community Data and FAIR Infrastructure in Biomedical Research Domains.
Proceedings of the 1st Conference on Research Data Infrastructure - Connecting Communities, 2023

RDM Services at the Luxembourg National Data Service.
Proceedings of the 1st Conference on Research Data Infrastructure - Connecting Communities, 2023

2022
A formalization of one of the main claims of "Mutations in STX1B, encoding a presynaptic protein, cause fever-associated epilepsy syndromes" by Schubert et al. 20141.
Data Sci., 2022

COBREXA.jl: constraint-based reconstruction and exascale analysis.
Bioinform., 2022

Translational Challenges of Biomedical Machine Learning Solutions in Clinical and Laboratory Settings.
Proceedings of the Bioinformatics and Biomedical Engineering, 2022

2021
PredictProtein - Predicting Protein Structure and Function for 29 Years.
Nucleic Acids Res., 2021

2019
Data and knowledge management in translational research: implementation of the eTRIKS platform for the IMI OncoTrack consortium.
BMC Bioinform., 2019

Presenting and sharing clinical data using the eTRIKS Standards Master Tree for tranSMART.
Bioinform., 2019

2018
The ISCB Student Council Internship Program: Expanding computational biology capacity worldwide.
PLoS Comput. Biol., 2018

Provenance-Enabled Stewardship of Human Data in the GDPR Era.
Proceedings of the Provenance and Annotation of Data and Processes, 2018

2017
The future of metabolomics in ELIXIR.
F1000Research, 2017

ARTENOLIS: Automated Reproducibility and Testing Environment for Licensed Software.
CoRR, 2017

SmartR: an open-source platform for interactive visual analytics for translational research data.
Bioinform., 2017

nala: text mining natural language mutation mentions.
Bioinform., 2017

BioKB - Text mining and semantic technologies for the biomedical content discovery.
Proceedings of the 10th International Conference on Semantic Web Applications and Tools for Health Care and Life Sciences (SWAT4LS 2017), 2017

2016
Integration and Visualization of Translational Medicine Data for Better Understanding of Human Diseases.
Big Data, 2016

Semantic Web Technologies for a Knowledge Base of Biomedical Facts Extracted from Scientific Literature.
Proceedings of the 9th International Conference Semantic Web Applications and Tools for Life Sciences, 2016

2015
BioTextQuest+: a knowledge integration platform for literature mining and concept discovery.
Bioinform., 2015

2014
The HIV Mutation Browser: A Resource for Human Immunodeficiency Virus Mutagenesis and Polymorphism Data.
PLoS Comput. Biol., 2014

BioTextQuest<sup>+</sup>: a knowledge integration platform for literature mining and concept discovery.
Bioinform., 2014

2013
The Young PI Buzz: Learning from the Organizers of the Junior Principal Investigator Meeting at ISMB-ECCB 2013.
PLoS Comput. Biol., 2013

Don't Wear Your New Shoes (Yet): Taking the Right Steps to Become a Successful Principal Investigator.
PLoS Comput. Biol., 2013

OnTheFly 2.0: A tool for automatic annotation of files and biological information extraction.
Proceedings of the 13th IEEE International Conference on BioInformatics and BioEngineering, 2013

2012
Caipirini: using gene sets to rank literature.
BioData Min., 2012

2010
Reflect: A practical approach to web semantics.
J. Web Semant., 2010

GPCRs, G-proteins, effectors and their interactions: human-gpDB, a database employing visualization tools and data integration techniques.
Database J. Biol. Databases Curation, 2010

2008
Arena3D: visualization of biological networks in 3D.
BMC Syst. Biol., 2008

Clustering of cognate proteins among distinct proteomes derived from multiple links to a single seed sequence.
BMC Bioinform., 2008


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