Trevor Bedford

According to our database, Trevor Bedford authored at least 15 papers between 2011 and 2024.

Collaborative distances:

• Dijkstra number of five.
• Erdős number of four.

2024

Fitness models provide accurate short-term forecasts of SARS-CoV-2 variant frequency.

Eslam Abousamra, Marlin Figgins, Trevor Bedford

PLoS Comput. Biol., 2024

2023

Joint visualization of seasonal influenza serology and phylogeny to inform vaccine composition.

Jover Lee, James Hadfield, Allison Black, Thomas R. Sibley, Richard A. Neher, Trevor Bedford, John Huddleston

Frontiers Bioinform., May, 2023

2021

Augur: a bioinformatics toolkit for phylogenetic analyses of human pathogens.

John Huddleston, James Hadfield, Thomas R. Sibley, Jover Lee, Kairsten Fay, Misja Ilcisin, Elias Harkins, Trevor Bedford, Richard A. Neher, Emma B. Hodcroft

J. Open Source Softw., 2021

2020

Early prediction of antigenic transitions for influenza A/H3N2.

Lauren Castro, Trevor Bedford, Lauren Ancel Meyers

PLoS Comput. Biol., 2020

dms-view: Interactive visualization tool for deep mutational scanning data.

Sarah Hilton, John Huddleston, Allison Black, Khrystyna North, Adam S. Dingens, Trevor Bedford, Jesse D. Bloom

J. Open Source Softw., 2020

2018

Nextstrain: real-time tracking of pathogen evolution.

James Hadfield, Colin Megill, Sidney M. Bell, John Huddleston, Barney Potter, Charlton Callender, Pavel Sagulenko, Trevor Bedford, Richard A. Neher

Bioinform., 2018

2017

Lorenzo-Redondo <i>et al</i>. reply.

Ramon Lorenzo-Redondo, Helen R. Fryer, Trevor Bedford, Eun-Young Kim, John A. C. Archer, Sergei L. Kosakovsky Pond, Yoon-Seok Chung, Sudhir Penugonda, Jeffrey G. Chipman, Courtney V. Fletcher, Timothy W. Schacker, Michael H. Malim, Andrew Rambaut, Ashley T. Haase, Angela R. McLean, Steven M. Wolinsky

Nat., 2017

Establishment and cryptic transmission of Zika virus in Brazil and the Americas.

Nuno R. Faria, Joshua Quick, I. M. Claro, Julien Thézé, J. G. de Jesus, Marta Giovanetti, Moritz U. G. Kraemer, S. C. Hill, Allison Black, A. C. Da Costa, L. C. Franco, S. P. Silva, Chieh-Hsi Wu, Jayna Raghwani, Simon Cauchemez, Louis du Plessis, M. P. Verotti, W. K. de Oliveira, E. H. Carmo, G. E. Coelho, A. C. F. S. Santelli, L. C. Vinhal, C. M. Henriques, J. T. Simpson, Matthew Loose, Kristian G. Andersen, N. D. Grubaugh, S. Somasekar, C. Y. Chiu, J. E. Muñoz-Medina, C. R. Gonzalez-Bonilla, Carolina Fócil Arias, L. L. Lewis-Ximenez, S. A. Baylis, A. O. Chieppe, S. F. Aguiar, C. A. Fernandes, P. S. Lemos, B. L. S. Nascimento, H. A. O. Monteiro, I. C. Siqueira, M. G. de Queiroz, T. R. de Souza, J. F. Bezerra, M. R. Lemos, G. F. Pereira, D. Loudal, L. C. Moura, R. Dhalia, R. F. França, T. Magalhães, E. T. Marques Jr, Thomas Jaenisch, Gabriel da Luz Wallau, M. C. de Lima, V. Nascimento, E. M. de Cerqueira, M. M. de Lima, D. L. Mascarenhas, J. P. Moura Neto, A. S. Levin, T. R. Tozetto-Mendoza, S. N. Fonseca, M. C. Mendes-Correa, F. P. Milagres, Aluisio Segurado, Edward C. Holmes, Andrew Rambaut, Trevor Bedford, M. R. T. Nunes, Ester C. Sabino, Luis Carlos Alcantara, Nicholas J. Loman, Oliver G. Pybus

Nat., 2017

Virus genomes reveal factors that spread and sustained the Ebola epidemic.

Gytis Dudas, Luiz Max Carvalho, Trevor Bedford, Andrew J. Tatem, Guy Baele, Nuno R. Faria, Daniel J. Park, Jason T. Ladner, Armando Arias, Danny Asogun, Filip Bielejec, Sarah L. Caddy, Matthew Cotten, Jonathan D'Ambrozio, Simon Dellicour, Antonino Di Caro, Joseph W. Diclaro, Sophie Duraffour, Michael J. Elmore, Lawrence S. Fakoli, Ousmane Faye, Merle L. Gilbert, Sahr M. Gevao, Stephen Gire, Adrianne Gladden-Young, Andreas Gnirke, Augustine Goba, Donald S. Grant, Bart L. Haagmans, Julian A. Hiscox, Umaru Jah, Jeffrey R. Kugelman, Di Liu, Jia Lu, Christine M. Malboeuf, Suzanne Mate, David A. Matthews, Christian B. Matranga, Luke W. Meredith, James Qu, Joshua Quick, Suzan D. Pas, My V. T. Phan, Georgios Pollakis, Chantal B. Reusken, Mariano Sanchez-Lockhart, Stephen F. Schaffner, John S. Schieffelin, Rachel S. G. Sealfon, Etienne Simon-Loriere, Saskia L. Smits, Kilian Stoecker, Lucy Thorne, Ekaete Alice Tobin, Mohamed A. Vandi, Simon J. Watson, Kendra West, Shannon Whitmer, Michael R. Wiley, Sarah M. Winnicki, Shirlee Wohl, Roman Wölfel, Nathan L. Yozwiak, Kristian G. Andersen, Sylvia O. Blyden, Fatorma Bolay, Miles W. Carroll, Bernice Dahn, Boubacar Diallo, Pierre Formenty, Christophe Fraser, George F. Gao, Robert F. Garry, Ian Goodfellow, Stephan Günther, Christian T. Happi, Edward C. Holmes, Brima Kargbo, Sakoba Keïta, Paul Kellam, Marion Koopmans, Jens H. Kuhn, Nicholas J. Loman, N'Faly Magassouba, Dhamari Naidoo, Stuart T. Nichol, Tolbert Nyenswah, Gustavo F. Palacios, Oliver G. Pybus, Pardis C. Sabeti, Amadou Sall, Ute Ströher, Isatta Wurie, Marc A. Suchard, Philippe Lemey, Andrew Rambaut

Nat., 2017

2016

Quantifying and Mitigating the Effect of Preferential Sampling on Phylodynamic Inference.

Michael D. Karcher, Julia A. Palacios, Trevor Bedford, Marc A. Suchard, Vladimir N. Minin

PLoS Comput. Biol., 2016

2015

Global circulation patterns of seasonal influenza viruses vary with antigenic drift.

Trevor Bedford, Steven Riley, Ian G. Barr, Shobha Broor, Mandeep Chadha, Nancy J. Cox, Rodney S. Daniels, C. Palani Gunasekaran, Aeron C. Hurt, Anne Kelso, Alexander Klimov, Nicola S. Lewis, Xiyan Li, John W. McCauley, Takato Odagiri, Varsha Potdar, Andrew Rambaut, Yuelong Shu, Eugene Skepner, Derek J. Smith, Marc A. Suchard, Masato Tashiro, Dayan Wang, Xiyan Xu, Philippe Lemey, Colin A. Russell

Nat., 2015

nextflu: real-time tracking of seasonal influenza virus evolution in humans.

Richard A. Neher, Trevor Bedford

Bioinform., 2015

2014

Phylowood: interactive web-based animations of biogeographic and phylogeographic histories.

Michael J. Landis, Trevor Bedford

Bioinform., 2014

2013

Viral Phylodynamics.

Erik M. Volz, Katia Koelle, Trevor Bedford

PLoS Comput. Biol., 2013

2011

Spatial Guilds in the Serengeti Food Web Revealed by a Bayesian Group Model.

Edward B. Baskerville, Andy P. Dobson, Trevor Bedford, Stefano Allesina, T. Michael Anderson, Mercedes Pascual

PLoS Comput. Biol., 2011