Toshio Shimizu

According to our database, Toshio Shimizu authored at least 11 papers between 2000 and 2006.

Collaborative distances:

• Dijkstra number of six.
• Erdős number of five.

2006

Analysis of Tandem Repeats Found in 44 Prokaryotic Genomes.

Satoshi Mizuta, Hikaru Munakata, Abulimiti Aimaiti, Ichitaro Oya, Kenji Oosawa, Toshio Shimizu

Silico Biol., 2006

2005

A proteome-wide analysis of domain architectures of prokaryotic single-spanning transmembrane proteins.

Masafumi Arai, Takafumi Fukushi, Masanobu Satake, Toshio Shimizu

Comput. Biol. Chem., 2005

2004

ConPred II: a consensus prediction method for obtaining transmembrane topology models with high reliability.

Masafumi Arai, Hironori Mitsuke, Masami Ikeda, Jun-Xiong Xia, Takashi Kikuchi, Masanobu Satake, Toshio Shimizu

Nucleic Acids Res., 2004

ConPred_elite: a highly reliable approach to transmembrane topology prediction.

Jun-Xiong Xia, Masami Ikeda, Toshio Shimizu

Comput. Biol. Chem., 2004

Proteome-wide classification and identification of mammalian-type GPCRs by binary topology pattern.

Yasuhito Inoue, Masami Ikeda, Toshio Shimizu

Comput. Biol. Chem., 2004

2003

TMPDB: a database of experimentally-characterized transmembrane topologies.

Masami Ikeda, Masafumi Arai, Toshikatsu Okuno, Toshio Shimizu

Nucleic Acids Res., 2003

2002

Evaluating transmembrane topology prediction methods for the effect of signal peptide in topology prediction.

Demelo Madrazo Lao, Toshikatsu Okuno, Toshio Shimizu

Silico Biol., 2002

The presence of signal peptide significantly affects transmembrane topology prediction.

Demelo Madrazo Lao, Masafumi Arai, Masami Ikeda, Toshio Shimizu

Bioinform., 2002

2001

Transmembrane topology prediction methods: A re-assessment and improvement by a consensus method using a dataset of experimentally-characterized transmembrane topology .

Masami Ikeda, Masafumi Arai, Demelo Madrazo Lao, Toshio Shimizu

Silico Biol., 2001

Structure Design of Neural Networks Using Genetic Algorithms.

Satoshi Mizuta, Takashi Sato, Demelo Madrazo Lao, Masami Ikeda, Toshio Shimizu

Complex Syst., 2001

2000

Parallel Computing Technique of Pairwise Alignment by a Dataflow Loop-Structured-Computer.

Nobuaki Kikuchi, Zhongmin Li, Demelo Madrazo Lao, Natalia V. Polulyakh, Yoshio Yoshioka, Toshio Shimizu

Proceedings of the International Conference on Parallel and Distributed Processing Techniques and Applications, 2000