Tomás Martínek

According to our database, Tomás Martínek authored at least 26 papers between 2005 and 2024.

Collaborative distances:

• Dijkstra number of five.
• Erdős number of four.

2024

Developing and Benchmarking Sulfate and Sulfamate Force Field Parameters via Ab Initio Molecular Dynamics Simulations To Accurately Model Glycosaminoglycan Electrostatic Interactions.

Miguel Riopedre-Fernandez, Vojtech Kostal, Tomás Martínek, Hector Martinez-Seara, Denys Biriukov

J. Chem. Inf. Model., 2024

LGBM2VHDL: Mapping of LightGBM Models to FPGA.

Tomás Martínek, Jan Korenek, Tomás Cejka

Proceedings of the 32nd IEEE Annual International Symposium on Field-Programmable Custom Computing Machines, 2024

2023

Evolutionary Optimized 3D WiFi Antennas Manufactured via Laser Powder Bed Fusion.

Dominik Mair, Michael Renzler, Stanislav Kovar, Tomás Martínek, Tomas Kadavy, Simon Bergmueller, Andrada Horn, Jakob Braun, Lukas Kaserer

IEEE Access, 2023

2021

digIS: towards detecting distant and putative novel insertion sequence elements in prokaryotic genomes.

Janka Puterová, Tomás Martínek

BMC Bioinform., 2021

SoluProt: prediction of soluble protein expression in Escherichia coli.

Jirí Hon, Martin Marusiak, Tomás Martínek, Antonin Kunka, Jaroslav Zendulka, David Bednar, Jirí Damborský

Bioinform., 2021

2020

EnzymeMiner: automated mining of soluble enzymes with diverse structures, catalytic properties and stabilities.

Jirí Hon, Simeon Borko, Jan Stourac, Zbynek Prokop, Jaroslav Zendulka, David Bednar, Tomás Martínek, Jirí Damborský

Nucleic Acids Res., 2020

2018

HotSpot Wizard 3.0: web server for automated design of mutations and smart libraries based on sequence input information.

Lenka Sumbalova, Jan Stourac, Tomás Martínek, David Bednar, Jirí Damborský

Nucleic Acids Res., 2018

2017

FireProt: web server for automated design of thermostable proteins.

Milos Musil, Jan Stourac, Jaroslav Bendl, Jan Brezovsky, Zbynek Prokop, Jaroslav Zendulka, Tomás Martínek, David Bednar, Jirí Damborský

Nucleic Acids Res., 2017

pqsfinder: an exhaustive and imperfection-tolerant search tool for potential quadruplex-forming sequences in R.

Jirí Hon, Tomás Martínek, Jaroslav Zendulka, Matej Lexa

Bioinform., 2017

2016

Scanning System for Ballistic Analysis.

Tomás Martínek, Josef Kudelka, Milan Navrátil, Vojtech Kresálek

Proceedings of the Automation Control Theory Perspectives in Intelligent Systems, 2016

2014

On Identities in Modern Networks.

Libor Polcak, Radek Hranicky, Tomás Martínek

J. Digit. Forensics Secur. Law, 2014

Uneven Distribution of Potential Triplex Sequences in the Human Genome - In Silico Study using the R/Bioconductor Package Triplex.

Matej Lexa, Tomás Martínek, Marie Brázdová

Proceedings of the BIOINFORMATICS 2014, 2014

2013

Triplex: an R/Bioconductor package for identification and visualization of potential intramolecular triplex patterns in DNA sequences.

Jirí Hon, Tomás Martínek, Kamil Rajdl, Matej Lexa

Bioinform., 2013

2011

A dynamic programming algorithm for identification of triplex-forming sequences.

Matej Lexa, Tomás Martínek, Ivana Burgetova, Daniel Kopecek, Marie Brázdová

Bioinform., 2011

Architecture model for approximate tandem repeat detection.

Tomás Martínek, Matej Lexa

Proceedings of the 22nd IEEE International Conference on Application-specific Systems, 2011

2010

Hardware Acceleration of Approximate Tandem Repeat Detection.

Tomás Martínek, Matej Lexa

Proceedings of the 18th IEEE Annual International Symposium on Field-Programmable Custom Computing Machines, 2010

2009

Architecture model for approximate palindrome detection.

Tomás Martínek, Jan Vozenilek, Matej Lexa

Proceedings of the 2009 IEEE Symposium on Design and Diagnostics of Electronic Circuits and Systems, 2009

2008

Hardware acceleration of approximate palindromes searching.

Tomás Martínek, Matej Lexa

Proceedings of the 2008 International Conference on Field-Programmable Technology, 2008

GICS: Generic interconnection system.

Tamas Malek, Tomás Martínek, Jan Korenek

Proceedings of the FPL 2008, 2008

NetCOPE: Platform for Rapid Development of Network Applications.

Tomás Martínek, Martin Kosek

Proceedings of the 11th IEEE Workshop on Design & Diagnostics of Electronic Circuits & Systems (DDECS 2008), 2008

2007

High Level Abstraction Language as an Alternative to Embedded Processors for Internet Packet Processing in FPGA.

Tomas Dedek, Tomas Marek, Tomás Martínek

Proceedings of the FPL 2007, 2007

Online Protocol Testing for FPGA Based Fault Tolerant Systems.

Jiri Tobola, Zdenek Kotásek, Jan Korenek, Tomás Martínek, Martin Straka

Proceedings of the Tenth Euromicro Conference on Digital System Design: Architectures, 2007

Automatic Generation of Circuits for Approximate String Matching.

Tomás Martínek, Otto Fucík, Patrik Beck, Matej Lexa

Proceedings of the 10th IEEE Workshop on Design & Diagnostics of Electronic Circuits & Systems (DDECS 2007), 2007

2006

A Flexible Technique for the Automatic Design of Approximate String Matching Architectures.

Tomás Martínek, Jan Korenek, Otto Fucík, Matej Lexa

Proceedings of the 9th IEEE Workshop on Design & Diagnostics of Electronic Circuits & Systems (DDECS 2006), 2006

Extrinsic and Intrinsic Evolution of Multifunctional Combinational Modules.

Lukás Sekanina, Tomás Martínek, Zbysek Gajda

Proceedings of the IEEE International Conference on Evolutionary Computation, 2006

2005

An Evolvable Image Filter: Experimental Evaluation of a Complete Hardware Implementation in FPGA.

Tomás Martínek, Lukás Sekanina

Proceedings of the Evolvable Systems: From Biology to Hardware, 2005