Tom Lenaerts

According to our database, Tom Lenaerts authored at least 102 papers between 1998 and 2024.

Collaborative distances:

• Dijkstra number of four.
• Erdős number of three.

2024

Toward a Solid Acceptance of the Decentralized Web of Personal Data: Societal and Technological Convergence.

Ana Pop Stefanija, Bart Buelens, Elfi Goesaert, Tom Lenaerts, Jo Pierson, Jan Van den Bussche

Commun. ACM, January, 2024

DUVEL: an active-learning annotated biomedical corpus for the recognition of oligogenic combinations.

Charlotte Nachtegael, Jacopo De Stefani, Anthony Cnudde, Tom Lenaerts

Database J. Biol. Databases Curation, January, 2024

Laser Learning Environment: A new environment for coordination-critical multi-agent tasks.

Yannick Molinghen, Raphaël Avalos, Mark Van Achter, Ann Nowé, Tom Lenaerts

CoRR, 2024

Mitigating Biases in Collective Decision-Making: Enhancing Performance in the Face of Fake News.

Axel Abels, Elias Fernández Domingos, Ann Nowé, Tom Lenaerts

CoRR, 2024

Defaults: a double-edged sword in governing common resources.

Eladio Montero-Porras, Rémi Suchon, Tom Lenaerts, Elias Fernández Domingos

CoRR, 2024

To Promote Full Cooperation in Social Dilemmas, Agents Need to Unlearn Loyalty.

Chin-wing Leung, Tom Lenaerts, Paolo Turrini

Proceedings of the Thirty-Third International Joint Conference on Artificial Intelligence, 2024

2023

Faster and more accurate pathogenic combination predictions with VarCoPP2.0.

Nassim Versbraegen, Barbara Gravel, Charlotte Nachtegael, Alexandre Renaux, Emma Verkinderen, Ann Nowé, Tom Lenaerts, Sofia Papadimitriou

BMC Bioinform., December, 2023

A knowledge graph approach to predict and interpret disease-causing gene interactions.

Alexandre Renaux, Chloé Terwagne, Michael Cochez, Ilaria Tiddi, Ann Nowé, Tom Lenaerts

BMC Bioinform., December, 2023

Dealing with expert bias in collective decision-making.

Axel Abels, Tom Lenaerts, Vito Trianni, Ann Nowé

Artif. Intell., July, 2023

Excalibur: A new ensemble method based on an optimal combination of aggregation tests for rare-variant association testing for sequencing data.

Simon Boutry, Raphaël Helaers, Tom Lenaerts, Miikka Vikkula

PLoS Comput. Biol., 2023

Expertise Trees Resolve Knowledge Limitations in Collective Decision-Making.

Axel Abels, Tom Lenaerts, Vito Trianni, Ann Nowé

Proceedings of the International Conference on Machine Learning, 2023

ACROCPoLis: A Descriptive Framework for Making Sense of Fairness.

Andrea Aler Tubella, Dimitri Coelho Mollo, Adam Dahlgren Lindström, Hannah Devinney, Virginia Dignum, Petter Ericson, Anna Jonsson, Timotheus Kampik, Tom Lenaerts, Julian Alfredo Mendez, Juan Carlos Nieves

Proceedings of the 2023 ACM Conference on Fairness, Accountability, and Transparency, 2023

ALAMBIC : Active Learning Automation Methods to Battle Inefficient Curation.

Charlotte Nachtegael, Jacopo De Stefani, Tom Lenaerts

Proceedings of the 17th Conference of the European Chapter of the Association for Computational Linguistics. EACL 2023, 2023

2022

BOCK: Biological networks and Oligogenic Combinations as a Knowledge graph.

Alexandre Renaux, Ann Nowé, Tom Lenaerts

Dataset, December, 2022

BOCK: Biological networks and Oligogenic Combinations as a Knowledge graph.

Alexandre Renaux, Ann Nowé, Tom Lenaerts

Dataset, December, 2022

The art of compensation: how hybrid teams solve collective risk dilemmas.

Inês Terrucha, Elias Fernández Domingos, Francisco C. Santos, Pieter Simoens, Tom Lenaerts

CoRR, 2022

Inferring Strategies from Observations in Long Iterated Prisoner's Dilemma Experiments.

Eladio Montero-Porras, Jelena Grujic, Elias Fernández Domingos, Tom Lenaerts

CoRR, 2022

Scaling up oligogenic diseases research with OLIDA: the Oligogenic Diseases Database.

Charlotte Nachtegael, Barbara Gravel, Arnau Dillen, Guillaume Smits, Ann Nowé, Sofia Papadimitriou, Tom Lenaerts

Database J. Biol. Databases Curation, 2022

2021

Modeling behavioral experiments on uncertainty and cooperation with population-based reinforcement learning.

Elias Fernández Domingos, Jelena Grujic, Juan C. Burguillo, Francisco C. Santos, Tom Lenaerts

Simul. Model. Pract. Theory, 2021

Repeated Interaction and Its Impact on Cooperation and Surplus Allocation - An Experimental Analysis.

Sibilla Di Guida, The Anh Han, Georg Kirchsteiger, Tom Lenaerts, Ioannis Zisis

Games, 2021

Voluntary safety commitments provide an escape from over-regulation in AI development.

The Anh Han, Tom Lenaerts, Francisco C. Santos, Luís Moniz Pereira

CoRR, 2021

Delegation to autonomous agents promotes cooperation in collective-risk dilemmas.

Elias Fernández Domingos, Inês Terrucha, Rémi Suchon, Jelena Grujic, Juan C. Burguillo, Francisco C. Santos, Tom Lenaerts

CoRR, 2021

A Regulation Dilemma in Artificial Intelligence Development.

The Anh Han, Francisco C. Santos, Luís Moniz Pereira, Tom Lenaerts

Proceedings of the 2021 Conference on Artificial Life, 2021

Modeling behavioral experiments on uncertainty and cooperation with population-based reinforcement learning - Extended Abstract.

Elias Fernández Domingos, Jelena Grujic, Juan C. Burguillo, Francisco C. Santos, Tom Lenaerts

Proceedings of the 2021 Conference on Artificial Life, 2021

2020

To Regulate or Not: A Social Dynamics Analysis of an Idealised AI Race.

The Anh Han, Luís Moniz Pereira, Francisco C. Santos, Tom Lenaerts

J. Artif. Intell. Res., 2020

AI Development Race Can Be Mediated on Heterogeneous Networks.

Theodor Cimpeanu, Francisco C. Santos, Luís Moniz Pereira, Tom Lenaerts, The Anh Han

CoRR, 2020

Mediating Artificial Intelligence Developments through Negative and Positive Incentives.

The Anh Han, Luís Moniz Pereira, Tom Lenaerts, Francisco C. Santos

CoRR, 2020

Timing uncertainty in collective risk dilemmas encourages group reciprocation and polarization.

Elias Fernández Domingos, Jelena Grujic, Juan C. Burguillo, Georg Kirchsteiger, Francisco C. Santos, Tom Lenaerts

CoRR, 2020

How Expert Confidence Can Improve Collective Decision-Making in Contextual Multi-Armed Bandit Problems.

Axel Abels, Tom Lenaerts, Vito Trianni, Ann Nowé

Proceedings of the Computational Collective Intelligence - 12th International Conference, 2020

Collective Decision-Making as a Contextual Multi-armed Bandit Problem.

Axel Abels, Tom Lenaerts, Vito Trianni, Ann Nowé

Proceedings of the Computational Collective Intelligence - 12th International Conference, 2020

2019

Towards Large-Scale Optimization of Iterated Prisoner Dilemma Strategies.

Grazyna Starzec, Mateusz Starzec, Aleksander Byrski, Marek Kisiel-Dorohinicki, Juan C. Burguillo, Tom Lenaerts

Trans. Comput. Collect. Intell., 2019

ORVAL: a novel platform for the prediction and exploration of disease-causing oligogenic variant combinations.

Alexandre Renaux, Sofia Papadimitriou, Nassim Versbraegen, Charlotte Nachtegael, Simon Boutry, Ann Nowé, Guillaume Smits, Tom Lenaerts

Nucleic Acids Res., 2019

Modelling the Safety and Surveillance of the AI Race.

The Anh Han, Luís Moniz Pereira, Francisco C. Santos, Tom Lenaerts

CoRR, 2019

Using game theory and decision decomposition to effectively discern and characterise bi-locus diseases.

Nassim Versbraegen, Aziz Fouché, Charlotte Nachtegael, Sofia Papadimitriou, Andrea M. Gazzo, Guillaume Smits, Tom Lenaerts

Artif. Intell. Medicine, 2019

Dynamic Weights in Multi-Objective Deep Reinforcement Learning.

Axel Abels, Diederik M. Roijers, Tom Lenaerts, Ann Nowé, Denis Steckelmacher

Proceedings of the 36th International Conference on Machine Learning, 2019

Towards a Phylogenetic Measure to Quantify HIV Incidence.

Pieter Libin, Nassim Versbraegen, Ana B. Abecasis, Perpetua Gomes, Tom Lenaerts, Ann Nowé

Proceedings of the 31st Benelux Conference on Artificial Intelligence (BNAIC 2019) and the 28th Belgian Dutch Conference on Machine Learning (Benelearn 2019), 2019

Modelling and Influencing the AI Bidding War: A Research Agenda.

The Anh Han, Luís Moniz Pereira, Tom Lenaerts

Proceedings of the 2019 AAAI/ACM Conference on AI, Ethics, and Society, 2019

2018

Flexible asynchronous simulation of iterated prisoner's dilemma based on actor model.

Grazyna Skiba, Mateusz Starzec, Aleksander Byrski, Katarzyna Rycerz, Marek Kisiel-Dorohinicki, Wojciech Turek, Daniel Krzywicki, Tom Lenaerts, Juan C. Burguillo

Simul. Model. Pract. Theory, 2018

Evolutionary dynamics of paroxysmal nocturnal hemoglobinuria.

Nathaniel Mon Père, Tom Lenaerts, Jorge M. Pacheco, David Dingli

PLoS Comput. Biol., 2018

Emergence of Population Structure in~Socio-cognitively Inspired Ant~Colony Optimization.

Aleksander Byrski, Ewelina Swiderska, Jakub Lasisz, Marek Kisiel-Dorohinicki, Tom Lenaerts, Dana Samson, Bipin Indurkhya

Comput. Sci., 2018

2017

DEOGEN2: prediction and interactive visualization of single amino acid variant deleteriousness in human proteins.

Daniele Raimondi, Ibrahim Tanyalcin, Julien Ferté, Andrea M. Gazzo, Gabriele Orlando, Tom Lenaerts, Marianne Rooman, Wim F. Vranken

Nucleic Acids Res., 2017

Socio-cognitively inspired ant colony optimization.

Aleksander Byrski, Ewelina Swiderska, Jakub Lasisz, Marek Kisiel-Dorohinicki, Tom Lenaerts, Dana Samson, Bipin Indurkhya, Ann Nowé

J. Comput. Sci., 2017

SVM-dependent pairwise HMM: an application to protein pairwise alignments.

Gabriele Orlando, Daniele Raimondi, Taushif Khan, Tom Lenaerts, Wim F. Vranken

Bioinform., 2017

Evolution of commitment and level of participation in public goods games.

The Anh Han, Luís Moniz Pereira, Tom Lenaerts

Auton. Agents Multi Agent Syst., 2017

Social Manifestation of Guilt Leads to Stable Cooperation in Multi-Agent Systems.

Luís Moniz Pereira, Tom Lenaerts, Luis A. Martinez-Vaquero, The Anh Han

Proceedings of the 16th Conference on Autonomous Agents and MultiAgent Systems, 2017

Commitment and Participation in Public Goods Games.

The Anh Han, Luís Moniz Pereira, Tom Lenaerts

Proceedings of the 16th Conference on Autonomous Agents and MultiAgent Systems, 2017

Centralized versus Personalized Commitments and Their Influence on Cooperation in Group Interactions.

The Anh Han, Luís Moniz Pereira, Luis A. Martinez-Vaquero, Tom Lenaerts

Proceedings of the Thirty-First AAAI Conference on Artificial Intelligence, 2017

Coordinating Human and Agent Behavior in Collective-Risk Scenarios.

Elias Fernández Domingos, Juan-Carlos Burguillo, Ann Nowé, Tom Lenaerts

Proceedings of the Thirty-First AAAI Conference on Artificial Intelligence, 2017

Reactive Versus Anticipative Decision Making in a Novel Gift-Giving Game.

Elias Fernández Domingos, Juan-Carlos Burguillo, Tom Lenaerts

Proceedings of the Thirty-First AAAI Conference on Artificial Intelligence, 2017

2016

From Binding-Induced Dynamic Effects in SH3 Structures to Evolutionary Conserved Sectors.

Ana Zafra Ruano, Elisa Cilia, José R. Couceiro, Javier Ruiz Sanz, Joost Schymkowitz, Frederic Rousseau, Irene Luque, Tom Lenaerts

PLoS Comput. Biol., 2016

NAR Breakthrough Article: DIDA: A curated and annotated digenic diseases database.

Andrea M. Gazzo, Dorien Daneels, Elisa Cilia, Maryse Bonduelle, Marc Abramowicz, Sonia Van Dooren, Guillaume Smits, Tom Lenaerts

Nucleic Acids Res., 2016

Multilevel biological characterization of exomic variants at the protein level significantly improves the identification of their deleterious effects.

Daniele Raimondi, Andrea M. Gazzo, Marianne Rooman, Tom Lenaerts, Wim F. Vranken

Bioinform., 2016

A synergy of costly punishment and commitment in cooperation dilemmas.

The Anh Han, Tom Lenaerts

Adapt. Behav., 2016

Enhancing Particle Swarm Optimization with Socio-cognitive Inspirations.

Iwan Bugajski, Piotr Listkiewicz, Aleksander Byrski, Marek Kisiel-Dorohinicki, Wojciech Korczynski, Tom Lenaerts, Dana Samson, Bipin Indurkhya, Ann Nowé

Proceedings of the International Conference on Computational Science 2016, 2016

Measuring Diversity of Socio-Cognitively Inspired ACO Search.

Ewelina Swiderska, Jakub Lasisz, Aleksander Byrski, Tom Lenaerts, Dana Samson, Bipin Indurkhya, Ann Nowé, Marek Kisiel-Dorohinicki

Proceedings of the Applications of Evolutionary Computation - 19th European Conference, 2016

Guilt for Non-Humans.

Luís Moniz Pereira, The Anh Han, Luis A. Martinez-Vaquero, Tom Lenaerts

Proceedings of the 2016 AAAI Spring Symposia, 2016

Conditions for the Evolution of Apology and Forgiveness in Populations of Autonomous Agents.

Tom Lenaerts, Luis A. Martinez-Vaquero, The Anh Han, Luís Moniz Pereira

Proceedings of the 2016 AAAI Spring Symposia, 2016

Emergence of Cooperation in Group Interactions: Avoidance vs. Restriction.

The Anh Han, Luís Moniz Pereira, Tom Lenaerts

Proceedings of the 2016 AAAI Spring Symposia, 2016

2015

Emergence of cooperation via intention recognition, commitment and apology - A research summary.

The Anh Han, Luís Moniz Pereira, Francisco C. Santos, Tom Lenaerts

AI Commun., 2015

Multi-pheromone ant Colony Optimization for Socio-cognitive Simulation Purposes.

Mateusz Sekara, Michal Kowalski, Aleksander Byrski, Bipin Indurkhya, Marek Kisiel-Dorohinicki, Dana Samson, Tom Lenaerts

Proceedings of the International Conference on Computational Science, 2015

The Efficient Interaction of Costly Punishment and Commitment.

The Anh Han, Tom Lenaerts

Proceedings of the 2015 International Conference on Autonomous Agents and Multiagent Systems, 2015

2014

The DynaMine webserver: predicting protein dynamics from sequence.

Elisa Cilia, Rita Pancsa, Peter Tompa, Tom Lenaerts, Wim F. Vranken

Nucleic Acids Res., 2014

Predicting virus mutations through statistical relational learning.

Elisa Cilia, Stefano Teso, Sergio Ammendola, Tom Lenaerts, Andrea Passerini

BMC Bioinform., 2014

Special Issue for the 20th Anniversary of the European Conference on Artificial Life (ECAL 2011).

Tom Lenaerts, Mario Giacobini, Hugues Bersini, Paul Bourgine, Marco Dorigo, René Doursat

Artif. Life, 2014

Politics Matters: Dynamics of Inter-organizational Networks among Immigrant Associations.

Matteo Gagliolo, Tom Lenaerts, Dirk Jacobs

Proceedings of the Complex Networks V, 2014

2013

Evolution of Common-Pool Resources and Social Welfare in Structured Populations.

Jean-Sébastien Lerat, The Anh Han, Tom Lenaerts

Proceedings of the IJCAI 2013, 2013

Why Is It So Hard to Say Sorry? Evolution of Apology with Commitments in the iterated Prisoner's Dilemma.

The Anh Han, Luís Moniz Pereira, Francisco C. Santos, Tom Lenaerts

Proceedings of the IJCAI 2013, 2013

2012

Accurate Prediction of the Dynamical Changes within the Second PDZ Domain of PTP1e.

Elisa Cilia, Geerten W. Vuister, Tom Lenaerts

PLoS Comput. Biol., 2012

Predicting virus mutations through relational learning.

Elisa Cilia, Stefano Teso, Sergio Ammendola, Tom Lenaerts, Andrea Passerini

Proceedings of the Workshop on Annotation, 2012

2011

Dynamics of Mutant Cells in Hierarchical Organized Tissues.

Benjamin Werner, David Dingli, Tom Lenaerts, Jorge M. Pacheco, Arne Traulsen

PLoS Comput. Biol., 2011

2010

Coevolution of Cooperation, Response to Adverse Social Ties and Network Structure.

Sven Van Segbroeck, Francisco C. Santos, Jorge M. Pacheco, Tom Lenaerts

Games, 2010

Learning to coordinate in complex networks.

Sven Van Segbroeck, Steven de Jong, Ann Nowé, Francisco C. Santos, Tom Lenaerts

Adapt. Behav., 2010

2009

The Evolutionary Transition Algorithm: Evolving Complex Solutions Out of Simpler Ones.

Tom Lenaerts, Anne Defaweux, Jano I. van Hemert

Proceedings of the Nature-Inspired Algorithms for Optimisation, 2009

Solving Hierarchically Decomposable Problems with the Evolutionary Transition Algorithm.

Tom Lenaerts, Anne Defaweux

Proceedings of the Natural Intelligence for Scheduling, Planning and Packing Problems, 2009

Information theoretical quantification of cooperativity in signalling complexes.

Tom Lenaerts, Jesper Ferkinghoff-Borg, Joost Schymkowitz, Frederic Rousseau

BMC Syst. Biol., 2009

Stochastic Simulation of the Chemoton.

Sven Van Segbroeck, Ann Nowé, Tom Lenaerts

Artif. Life, 2009

A Synthon Approach to Artificial Chemistry.

Tom Lenaerts, Hugues Bersini

Artif. Life, 2009

Emergence of Cooperation in Adaptive Social Networks with Behavioral Diversity.

Sven Van Segbroeck, Francisco C. Santos, Tom Lenaerts, Jorge M. Pacheco

Proceedings of the Advances in Artificial Life. Darwin Meets von Neumann, 2009

The coevolution of loyalty and cooperation.

Sven Van Segbroeck, Francisco C. Santos, Ann Nowé, Jorge M. Pacheco, Tom Lenaerts

Proceedings of the IEEE Congress on Evolutionary Computation, 2009

2008

Reconstruction of Protein Backbones from the BriX Collection of Canonical Protein Fragments.

Lies Baeten, Joke Reumers, Vicente Tur, François Stricher, Tom Lenaerts, Luis Serrano, Frederic Rousseau, Joost Schymkowitz

PLoS Comput. Biol., 2008

Evolution of Complexity.

Carlos Gershenson, Tom Lenaerts

Artif. Life, 2008

2007

Networks Regulating Networks: The Effects of Constraints on Topological Evolution.

Francisco C. Santos, Hugues Bersini, Tom Lenaerts

Proceedings of the Advances in Artificial Life, 9th European Conference, 2007

Evolution of Cooperation in a Population of Selfish Adaptive Agents.

Jorge M. Pacheco, Tom Lenaerts, Francisco C. Santos

Proceedings of the Advances in Artificial Life, 9th European Conference, 2007

2006

Cooperation Prevails When Individuals Adjust Their Social Ties.

Francisco C. Santos, Jorge M. Pacheco, Tom Lenaerts

PLoS Comput. Biol., 2006

2005

Dynamical Hierarchies.

Tom Lenaerts, Dominique F. Chu, Richard Watson

Artif. Life, 2005

Evolution of DNA Uptake Signal Sequences.

Dominique F. Chu, Hoong-Chien Lee, Tom Lenaerts

Artif. Life, 2005

Transition models as an incremental approach for problem solving in evolutionary algorithms.

Anne Defaweux, Tom Lenaerts, Jano I. van Hemert, Johan Parent

Proceedings of the Genetic and Evolutionary Computation Conference, 2005

Evolutionary Transitions as a Metaphor for Evolutionary Optimisation.

Anne Defaweux, Tom Lenaerts, Jano I. van Hemert

Proceedings of the Advances in Artificial Life, 8th European Conference, 2005

Growing Biochemical Networks: Identifying the Intrinsic Properties.

Hugues Bersini, Tom Lenaerts, Francisco C. Santos

Proceedings of the Advances in Artificial Life, 8th European Conference, 2005

Complexity transitions in evolutionary algorithms: evaluating the impact of the initial population.

Anne Defaweux, Tom Lenaerts, Jano I. van Hemert, Johan Parent

Proceedings of the IEEE Congress on Evolutionary Computation, 2005

2004

An Evolutionary Game Theoretic Perspective on Learning in Multi-Agent Systems.

Karl Tuyls, Ann Nowé, Tom Lenaerts, Bernard Manderick

Synth., 2004

Gene Interaction and Modularisation in a Model for Gene-Regulated Development.

Piet van Remortel, Bernard Manderick, Tom Lenaerts

Proceedings of the 6th NASA / DoD Workshop on Evolvable Hardware (EH 2004), 2004

2003

Developmental Effects on Tuneable Fitness Landscapes.

Piet van Remortel, Johan Ceuppens, Anne Defaweux, Tom Lenaerts, Bernard Manderick

Proceedings of the Evolvable Systems: From Biology to Hardware, 2003

A selection-mutation model for q-learning in multi-agent systems.

Karl Tuyls, Katja Verbeeck, Tom Lenaerts

Proceedings of the Second International Joint Conference on Autonomous Agents & Multiagent Systems, 2003

2002

Evaluation of a Simple Multi-Level Selection Model.

Tom Lenaerts, Anne Defaweux, Piet van Remortel, Bernard Manderick

Proceedings of the Late Breaking papers at the Genetic and Evolutionary Computation Conference (GECCO-2002), 2002

An Individual-based Approach To Multi-level Selection.

Tom Lenaerts, Anne Defaweux, Piet van Remortel, Bernard Manderick

Proceedings of the GECCO 2002: Proceedings of the Genetic and Evolutionary Computation Conference, 2002

The Robustness of Small Developped SBlock Circuits Using Different Clocking Schemes.

Piet van Remortel, Tom Lenaerts, Bernard Manderick

Proceedings of the 4th NASA / DoD Workshop on Evolvable Hardware (EH 2002), 2002

Learning to Reach the Pareto Optimal Nash Equilibrium as a Team.

Katja Verbeeck, Ann Nowé, Tom Lenaerts, Johan Parent

Proceedings of the AI 2002: Advances in Artificial Intelligence, 2002

Lineage and Induction in the Development of Evolved Genotypes for Non-uniform 2D CAs.

Piet van Remortel, Tom Lenaerts, Bernard Manderick

Proceedings of the AI 2002: Advances in Artificial Intelligence, 2002

2001

Raising the Dead: Extending Evolutionary Algorithms with a Case-Based Memory.

Jeroen Eggermont, Tom Lenaerts, Sanna Pöyhönen, Alexandre Termier

Proceedings of the Genetic Programming, 4th European Conference, 2001

Transitions in a Simple Evolutionary Model.

Tom Lenaerts, Anne Defaweux, P. Beyens, Bernard Manderick

Proceedings of the Advances in Artificial Life, 6th European Conference, 2001

1998

Building a Genetic Programming Framework: The Added-Value of Design Patterns.

Tom Lenaerts, Bernard Manderick

Proceedings of the Genetic Programming, First European Workshop, 1998