Todd P. Coleman

Orcid: 0000-0002-2144-2495

Affiliations:
  • Stanford University, CA, USA
  • University of California, San Diego, USA (former)


According to our database1, Todd P. Coleman authored at least 105 papers between 2004 and 2024.

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Bibliography

2024
Machine learning based DNA melt curve profiling enables automated novel genotype detection.
BMC Bioinform., December, 2024

A mutual information measure of phase-amplitude coupling using gamma generalized linear models.
Frontiers Comput. Neurosci., 2024

2023
Exploring the Gut-Brain Connection in Gastroparesis With Autonomic and Gastric Myoelectric Monitoring.
IEEE Trans. Biomed. Eng., December, 2023

Editorial Special Issue on Causality: Fundamental Limits and Applications.
IEEE J. Sel. Areas Inf. Theory, 2023

Exploring the aperiodic nature of parasympathetic activity during sleep in idiopathic gastroparesis.
Proceedings of the 45th Annual International Conference of the IEEE Engineering in Medicine & Biology Society, 2023

A Convex Formulation of Point Process Heartbeat Dynamics using a Gamma Generalized Linear Model.
Proceedings of the 19th IEEE International Conference on Body Sensor Networks, 2023

2022
Robust Regression and Optimal Transport Methods to Predict Gastrointestinal Disease Etiology From High Resolution EGG and Symptom Severity.
IEEE Trans. Biomed. Eng., 2022

Simultaneous Gut-Brain Electrophysiology Shows Cognition and Satiety Specific Coupling.
Sensors, 2022

Wireless Heart Sensor for Capturing Cardiac Orienting Response for Prediction of Neurodevelopmental Delay in Infants.
Sensors, 2022

Automated classification of sleep and wake from single day triaxial accelerometer data.
Proceedings of the 44th Annual International Conference of the IEEE Engineering in Medicine & Biology Society, 2022

A Mutual Information Measure of Phase-Amplitude Coupling using High Dimensional Sparse Models.
Proceedings of the 44th Annual International Conference of the IEEE Engineering in Medicine & Biology Society, 2022

2021
Statistical uncertainty quantification to augment clinical decision support: a first implementation in sleep medicine.
npj Digit. Medicine, 2021

Data-driven noise modeling of digital DNA melting analysis enables prediction of sequence discriminating power.
Bioinform., 2021

Sampling, variational Bayesian inference, and conditioned stochastic differential equations.
Proceedings of the 2021 60th IEEE Conference on Decision and Control (CDC), 2021

2020
Measuring Sample Path Causal Influences With Relative Entropy.
IEEE Trans. Inf. Theory, 2020

A Deep Convolutional Neural Network Approach to Classify Normal and Abnormal Gastric Slow Wave Initiation From the High Resolution Electrogastrogram.
IEEE Trans. Biomed. Eng., 2020

Smart Electronic Eyedrop Bottle for Unobtrusive Monitoring of Glaucoma Medication Adherence.
Sensors, 2020

Direct and Indirect Effects - An Information Theoretic Perspective.
Entropy, 2020

Robust Methods to Detect Abnormal Initiation in the Gastric Slow Wave from Cutaneous Recordings.
Proceedings of the 42nd Annual International Conference of the IEEE Engineering in Medicine & Biology Society, 2020

2019
A Distributed Framework for the Construction of Transport Maps.
Neural Comput., 2019

Construction and Analysis of Posterior Matching in Arbitrary Dimensions via Optimal Transport.
CoRR, 2019

On the Bias of Directed Information Estimators.
Proceedings of the IEEE International Symposium on Information Theory, 2019

2018
A Modularized Efficient Framework for Non-Markov Time Series Estimation.
IEEE Trans. Signal Process., 2018

A State Space and Density Estimation Framework for Sleep Staging in Obstructive Sleep Apnea.
IEEE Trans. Biomed. Eng., 2018

Epidermal Electrode Technology for Detecting Ultrasonic Perturbation of Sensory Brain Activity.
IEEE Trans. Biomed. Eng., 2018

A Sample Path Measure of Causal Influence.
Proceedings of the 2018 IEEE International Symposium on Information Theory, 2018

2017
High-Resolution Electrogastrogram: A Novel, Noninvasive Method for Determining Gastric Slow-Wave Direction and Speed.
IEEE Trans. Biomed. Eng., 2017

An Information and Control Framework for Optimizing User-Compliant Human-Computer Interfaces.
Proc. IEEE, 2017

Dynamical systems, ergodicity, and posterior matching.
Proceedings of the 2017 IEEE International Symposium on Information Theory, 2017

2016
Learning Minimal Latent Directed Information Polytrees.
Neural Comput., 2016

Timing Channel: Achievable Rate in the Finite Block-Length Regime.
CoRR, 2016

Efficient low-rank spectrotemporal decomposition using ADMM.
Proceedings of the IEEE Statistical Signal Processing Workshop, 2016

Diffeomorphism learning via relative entropy constrained optimal transport.
Proceedings of the 2016 IEEE Global Conference on Signal and Information Processing, 2016

2015
Directed Information Graphs.
IEEE Trans. Inf. Theory, 2015

An Optimizer's Approach to Stochastic Control Problems With Nonclassical Information Structures.
IEEE Trans. Autom. Control., 2015

Scalable Microfabrication Procedures for Adhesive-Integrated Flexible and Stretchable Electronic Sensors.
Sensors, 2015

A scalable framework to transform samples from one continuous distribution to another.
Proceedings of the IEEE International Symposium on Information Theory, 2015

Efficient total probability prediction via convex optimization and optimal transport.
Proceedings of the IEEE International Symposium on Information Theory, 2015

Bayesian LASSO in a distributed architecture.
Proceedings of the 2015 IEEE Global Conference on Signal and Information Processing, 2015

2014
Dynamic and Succinct Statistical Analysis of Neuroscience Data.
Proc. IEEE, 2014

Necessary and sufficient conditions for reliability of posterior matching in arbitrary dimensions.
Proceedings of the 2014 IEEE International Symposium on Information Theory, Honolulu, HI, USA, June 29, 2014

2013
Efficient Methods to Compute Optimal Tree Approximations of Directed Information Graphs.
IEEE Trans. Signal Process., 2013

Bit-Wise Unequal Error Protection for Variable-Length Block Codes With Feedback.
IEEE Trans. Inf. Theory, 2013

A Timing Channel Spyware for the CSMA/CA Protocol.
IEEE Trans. Inf. Forensics Secur., 2013

Grand Challenges in Mapping the Human Brain: NSF Workshop Report.
IEEE Trans. Biomed. Eng., 2013

Robust directed tree approximations for networks of stochastic processes.
Proceedings of the 2013 IEEE International Symposium on Information Theory, 2013

Efficient Bayesian inference methods via convex optimization and optimal transport.
Proceedings of the 2013 IEEE International Symposium on Information Theory, 2013

2012
Characterizing the Efficacy of the NRL Network Pump in Mitigating Covert Timing Channels.
IEEE Trans. Inf. Forensics Secur., 2012

Granger causality analysis of state dependent functional connectivity of neurons in orofacial motor cortex during chewing and swallowing.
Proceedings of the 6th International Conference on Soft Computing and Intelligent Systems (SCIS), 2012

Learning minimal latent directed information trees.
Proceedings of the 2012 IEEE International Symposium on Information Theory, 2012

Practical sensor management for an energy-limited detection system.
Proceedings of the 2012 IEEE International Conference on Acoustics, 2012

Granger causality analysis of functional connectivity of spiking neurons in orofacial motor cortex during chewing and swallowing.
Proceedings of the Annual International Conference of the IEEE Engineering in Medicine and Biology Society, 2012

Clustering large networks of parametric dynamic generative models.
Proceedings of the 51th IEEE Conference on Decision and Control, 2012

2011
A Message-Passing Approach to Combating Desynchronization Attacks.
IEEE Trans. Inf. Forensics Secur., 2011

Estimating the directed information to infer causal relationships in ensemble neural spike train recordings.
J. Comput. Neurosci., 2011

A Feedback Information-Theoretic Approach to the Design of Brain-Computer Interfaces.
Int. J. Hum. Comput. Interact., 2011

Information-Theoretic Viewpoints on Optimal Causal Coding-Decoding Problems
CoRR, 2011

Causal Dependence Tree Approximations of Joint Distributions for Multiple Random Processes
CoRR, 2011

Multi-layer Bit-wise Unequal Error Protection for Variable Length Blockcodes with Feedback
CoRR, 2011

Finite block-length achievable rates for queuing timing channels.
Proceedings of the 2011 IEEE Information Theory Workshop, 2011

Equivalence between minimal generative model graphs and directed information graphs.
Proceedings of the 2011 IEEE International Symposium on Information Theory Proceedings, 2011

A memoryless channel coding methodology for infinite-memory queuing timing channels.
Proceedings of the 2011 IEEE International Symposium on Information Theory Proceedings, 2011

Equivalence between reliable feedback communication and nonlinear filter stability.
Proceedings of the 2011 IEEE International Symposium on Information Theory Proceedings, 2011

Special session on information theory and neuroscience at ISIT 2011.
Proceedings of the 2011 IEEE International Symposium on Information Theory Proceedings, 2011

Information transfer between neurons in the motor cortex triggered by visual cues.
Proceedings of the 33rd Annual International Conference of the IEEE Engineering in Medicine and Biology Society, 2011

A minimal approach to causal inference on topologies with bounded indegree.
Proceedings of the 50th IEEE Conference on Decision and Control and European Control Conference, 2011

Generalizing the Posterior Matching Scheme to higher dimensions via optimal transportation.
Proceedings of the 49th Annual Allerton Conference on Communication, 2011

2010
Introduction to the special issue on information theory in molecular biology and neuroscience.
IEEE Trans. Inf. Theory, 2010

A Computationally Efficient Method for Nonparametric Modeling of Neural Spiking Activity with Point Processes.
Neural Comput., 2010

A dynamical point process model of auditory nerve spiking in response to complex sounds.
J. Comput. Neurosci., 2010

Approximating discrete probability distributions with causal dependence trees.
Proceedings of the International Symposium on Information Theory and its Applications, 2010

Directed information and the NRL Network Pump.
Proceedings of the International Symposium on Information Theory and its Applications, 2010

Bit-wise unequal error protection for variable length blockcodes with feedback.
Proceedings of the IEEE International Symposium on Information Theory, 2010

On reversible Markov chains and maximization of directed information.
Proceedings of the IEEE International Symposium on Information Theory, 2010

Source coding with feedforward using the posterior matching scheme.
Proceedings of the IEEE International Symposium on Information Theory, 2010

Mutual information saddle points in channels of exponential family type.
Proceedings of the IEEE International Symposium on Information Theory, 2010

An analytic spatial filter and a hidden Markov model for enhanced information transfer rate in EEG-based brain computer interfaces.
Proceedings of the IEEE International Conference on Acoustics, 2010

A stochastic control approach to coding with feedback over degraded broadcast channels.
Proceedings of the 49th IEEE Conference on Decision and Control, 2010

2009
A low-complexity universal scheme for rate-constrained distributed regression using a wireless sensor network.
IEEE Trans. Signal Process., 2009

Joint source-channel coding for transmitting correlated sources over broadcast networks.
IEEE Trans. Inf. Theory, 2009

A simple memoryless proof of the capacity of the exponential server timing channel.
Proceedings of the 2009 IEEE Information Theory Workshop, 2009

A stochastic control viewpoint on 'Posterior Matching'-style feedback communication schemes.
Proceedings of the IEEE International Symposium on Information Theory, 2009

Novel Shaping and Complexity-Reduction Techniques for Approaching Capacity over Queuing Timing Channels.
Proceedings of IEEE International Conference on Communications, 2009

Covert timing channels codes for communication over interactive traffic.
Proceedings of the IEEE International Conference on Acoustics, 2009

The parabigeminal nucleus as a recursive estimator.
Proceedings of the 48th IEEE Conference on Decision and Control, 2009

2008
Using stochastic control with data compression perspectives to enhance P300 Neural Communication Prostheses.
Proceedings of the 2008 IEEE Information Theory Workshop, 2008

Practical codes for queueing channels: An algebraic, state-space, message-passing approach.
Proceedings of the 2008 IEEE Information Theory Workshop, 2008

Querying the user properly for high-performance brain-machine interfaces: Recursive estimation, control, and feedback information-theoretic perspectives.
Proceedings of the IEEE International Conference on Acoustics, 2008

The Rate-Distortion Function of a Poisson Process with a Queueing Distortion Measure.
Proceedings of the 2008 Data Compression Conference (DCC 2008), 2008

Sparse graph codes and practical decoding algorithms for communicating over packet timings in networks.
Proceedings of the 42nd Annual Conference on Information Sciences and Systems, 2008

Policies for neural prosthetic control: Initial experiments with a text interface.
Proceedings of the American Control Conference, 2008

2007
Using Convex Optimization for Nonparametric Statistical Analysis of Point Processes.
Proceedings of the IEEE International Symposium on Information Theory, 2007

A computationally efficient method for modeling neural spiking activity with point processes nonparametrically.
Proceedings of the 46th IEEE Conference on Decision and Control, 2007

2006
Low-complexity approaches to distributed data dissemination.
PhD thesis, 2006

Low-Complexity Approaches to Slepian-Wolf Near-Lossless Distributed Data Compression.
IEEE Trans. Inf. Theory, 2006

Joint Source-Channel Decoding for Transmitting Correlated Sources over Broadcast Networks.
Proceedings of the Proceedings 2006 IEEE International Symposium on Information Theory, 2006

Time-Sharing Vs. Source-Splitting in the Slepian-Wolf Problem: Error Exponents Analysis.
Proceedings of the 2006 Data Compression Conference (DCC 2006), 2006

2005
Interference management via capacity-achieving codes for the deterministic broadcast channel.
Proceedings of the IEEE ITSOC Information Theory Workshop 2005 on Coding and Complexity, 2005

Rate-splitting for the deterministic broadcast channel.
Proceedings of the 2005 IEEE International Symposium on Information Theory, 2005

Towards bridging the gap between theory and practice for the Slepian-Wolf problem.
Proceedings of the 2005 IEEE International Conference on Acoustics, 2005

Towards Practical Minimum-Entropy Universal Decoding.
Proceedings of the 2005 Data Compression Conference (DCC 2005), 2005

2004
Capacity of time-slotted ALOHA packetized multiple-access systems over the AWGN channel.
IEEE Trans. Wirel. Commun., 2004

A distributed scheme for achieving energy-delay tradeoffs with multiple service classes over a dynamically varying network.
IEEE J. Sel. Areas Commun., 2004

A new source-splitting approach to the slepian-wolf problem.
Proceedings of the 2004 IEEE International Symposium on Information Theory, 2004

On Some New Approaches to Practical Slepian-Wolf Compression Inspired by Channel Coding.
Proceedings of the 2004 Data Compression Conference (DCC 2004), 2004


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