Todd J. Vision

Orcid: 0000-0002-6133-2581

According to our database1, Todd J. Vision authored at least 29 papers between 2000 and 2019.

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Bibliography

2019
Avoiding "conflicts of interest": A computational approach to scheduling parallel conference tracks and its human evaluation.
PeerJ Prepr., 2019

Avoiding "conflicts of interest": a computational approach to scheduling parallel conference tracks and its human evaluation.
PeerJ Comput. Sci., 2019

2018
Phenoscape: Semantic analysis of organismal traits and genes yields insights in evolutionary biology.
Proceedings of the Application of Semantic Technology in Biodiversity Science, 2018

'Computable' Phenotypes Enable Comparative and Predictive Phenomics Among Plant Species and Across Domains of Life.
Proceedings of the Application of Semantic Technology in Biodiversity Science, 2018

Annotation of phenotypes using ontologies: a gold standard for the training and evaluation of natural language processing systems.
Database J. Biol. Databases Curation, 2018

On the Statistical Sensitivity of Semantic Similarity Metrics.
Proceedings of the 9th International Conference on Biological Ontology (ICBO 2018), 2018

Reasoning over Anatomical Homology in the Phenoscape KB.
Proceedings of the 9th International Conference on Biological Ontology (ICBO 2018), 2018

2017
Evolution of anatomical concept usage over time: mining 200 years of biodiversity literature.
Proceedings of The International Workshop on Semantic Big Data, 2017

2016
Investigating the Importance of Anatomical Homology for Cross-Species Phenotype Comparisons Using Semantic Similarity.
Proceedings of the Biocomputing 2016: Proceedings of the Pacific Symposium, 2016

Measuring the Importance of Annotation Granularity to the Detection of Semantic Similarity Between Phenotype Profiles.
Proceedings of the Joint International Conference on Biological Ontology and BioCreative, 2016

2015
What Factors Influence Where Researchers Deposit their Data? A Survey of Researchers Submitting to Data Repositories.
Int. J. Digit. Curation, 2015

2014
ODIN: the ORCID and DataCite interoperability network.
Int. J. Knowl. Learn., 2014

Annotation of phenotypic diversity: decoupling data curation and ontology curation using Phenex.
J. Biomed. Semant., 2014

2013
The vertebrate taxonomy ontology: a framework for reasoning across model organism and species phenotypes.
J. Biomed. Semant., 2013

2012
Minimizing the number of episodes and Gallai's theorem on intervals
CoRR, 2012

2011
DataONE: Data Observation Network for Earth - Preserving Data and Enabling Innovation in the Biological and Environmental Sciences.
D Lib Mag., 2011

Similarity Between Semantic Description Sets: Addressing Needs Beyond Data Integration.
Proceedings of the First International Workshop on Linked Science 2011, 2011

Phenoscape: Use Cases and Anatomy Ontology Requirements for Linking Evolutionary and Model Organism Phenotypes.
Proceedings of the 2nd International Conference on Biomedical Ontology, 2011

Employing Reasoning within the Phenoscape Knowledgebase.
Proceedings of the 2nd International Conference on Biomedical Ontology, 2011

Beginning to track 1000 datasets from public repositories into the published literature.
Proceedings of the Bridging the Gulf: Communication and Information in Society, Technology, and Work, 2011

2010
Inferring species trees from gene duplication episodes.
Proceedings of the First ACM International Conference on Bioinformatics and Computational Biology, 2010

Evaluating data citation and sharing policies in the environmental sciences.
Proceedings of the Navigating Streams in an Information Ecosystem, 2010

2009
A hierarchical model for incomplete alignments in phylogenetic inference.
Bioinform., 2009

2007
Comparison of full-text searching to metadata searching for genes in two biomedical literature cohorts.
J. Assoc. Inf. Sci. Technol., 2007

A computational system to select candidate genes for complex human traits.
Bioinform., 2007

2006
Phytome: a platform for plant comparative genomics.
Nucleic Acids Res., 2006

2003
Fast identification and statistical evaluation of segmental homologies in comparative maps.
Proceedings of the Eleventh International Conference on Intelligent Systems for Molecular Biology, June 29, 2003

Reconstruction of Ancestral Gene Order after Segmental Duplication and Gene Loss.
Proceedings of the 2nd IEEE Computer Society Bioinformatics Conference, 2003

2000
Selective mapping: a discrete optimization approach to selecting a population subset for use in a high-density genetic mapping project.
Proceedings of the Eleventh Annual ACM-SIAM Symposium on Discrete Algorithms, 2000


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