Toby Hocking

Orcid: 0000-0002-3146-0865

According to our database1, Toby Hocking authored at least 40 papers between 2011 and 2024.

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Bibliography

2024
Finite Sample Complexity Analysis of Binary Segmentation.
CoRR, 2024

SOAK: Same/Other/All K-fold cross-validation for estimating similarity of patterns in data subsets.
CoRR, 2024

Efficient line search for optimizing Area Under the ROC Curve in gradient descent.
CoRR, 2024

Deep Learning Approach for Changepoint Detection: Penalty Parameter Optimization.
CoRR, 2024

2023
Labeled optimal partitioning.
Comput. Stat., March, 2023

Predicting Neuromuscular Engagement to Improve Gait Training With a Robotic Ankle Exoskeleton.
IEEE Robotics Autom. Lett., 2023

gfpop: An <i>R</i> Package for Univariate Graph-Constrained Change-Point Detection.
J. Stat. Softw., 2023

Optimizing ROC Curves with a Sort-Based Surrogate Loss for Binary Classification and Changepoint Detection.
J. Mach. Learn. Res., 2023

Cross-Validation for Training and Testing Co-occurrence Network Inference Algorithms.
CoRR, 2023

A Log-linear Gradient Descent Algorithm for Unbalanced Binary Classification using the All Pairs Squared Hinge Loss.
CoRR, 2023

2022
Survival Regression with Accelerated Failure Time Model in XGBoost.
J. Comput. Graph. Stat., October, 2022

Linear Time Dynamic Programming for Computing Breakpoints in the Regularization Path of Models Selected From a Finite Set.
J. Comput. Graph. Stat., January, 2022

Chatbots Language Design: The Influence of Language Variation on User Experience with Tourist Assistant Chatbots.
ACM Trans. Comput. Hum. Interact., 2022

Generalized Functional Pruning Optimal Partitioning (GFPOP) for Constrained Changepoint Detection in Genomic Data.
J. Stat. Softw., 2022

Functional Labeled Optimal Partitioning.
CoRR, 2022

Interpretable linear models for predicting security vulnerabilities in source code.
Proceedings of the Fourth International Conference on Transdisciplinary AI, 2022

Classifying Imbalanced Data with AUM Loss.
Proceedings of the Fourth International Conference on Transdisciplinary AI, 2022

Graph Embedding: A Methodological Survey.
Proceedings of the Fourth International Conference on Transdisciplinary AI, 2022

2021
Wide-to-tall Data Reshaping Using Regular Expressions and the nc Package.
R J., 2021

Optimizing ROC Curves with a Sort-Based Surrogate Loss Function for Binary Classification and Changepoint Detection.
CoRR, 2021

Chatbots language design: the influence of language variation on user experience.
CoRR, 2021

A greedy graph search algorithm based on changepoint analysis for automatic QRS complex detection.
Comput. Biol. Medicine, 2021

Increased peak detection accuracy in over-dispersed ChIP-seq data with supervised segmentation models.
BMC Bioinform., 2021

Fuzz Testing the Compiled Code in R Packages.
Proceedings of the 32nd IEEE International Symposium on Software Reliability Engineering, 2021

2020
Constrained Dynamic Programming and Supervised Penalty Learning Algorithms for Peak Detection in Genomic Data.
J. Mach. Learn. Res., 2020

Linear time dynamic programming for the exact path of optimal models selected from a finite set.
CoRR, 2020

Machine Learning Algorithms for Simultaneous Supervised Detection of Peaks in Multiple Samples andCell Types.
Proceedings of the Pacific Symposium on Biocomputing 2020, 2020

A Graph-constrained Changepoint Detection Approach for ECG Segmentation.
Proceedings of the 42nd Annual International Conference of the IEEE Engineering in Medicine & Biology Society, 2020

A Graph-Constrained Changepoint Learning Approach for Automatic QRS-Complex Detection.
Proceedings of the 54th Asilomar Conference on Signals, Systems, and Computers, 2020

2019
Comparing namedCapture with other R packages for regular expressions.
R J., 2019

2018
chipseq.
Dataset, February, 2018

2017
On optimal multiple changepoint algorithms for large data.
Stat. Comput., 2017

Optimizing ChIP-seq peak detectors using visual labels and supervised machine learning.
Bioinform., 2017

Maximum Margin Interval Trees.
Proceedings of the Advances in Neural Information Processing Systems 30: Annual Conference on Neural Information Processing Systems 2017, 2017

2015
PeakSeg: constrained optimal segmentation and supervised penalty learning for peak detection in count data.
Proceedings of the 32nd International Conference on Machine Learning, 2015

2014
Support vector comparison machines.
CoRR, 2014

SegAnnDB: interactive Web-based genomic segmentation.
Bioinform., 2014

2013
Learning smoothing models of copy number profiles using breakpoint annotations.
BMC Bioinform., 2013

Learning Sparse Penalties for Change-point Detection using Max Margin Interval Regression.
Proceedings of the 30th International Conference on Machine Learning, 2013

2011
Clusterpath: an Algorithm for Clustering using Convex Fusion Penalties.
Proceedings of the 28th International Conference on Machine Learning, 2011


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