Tobias Czauderna

According to our database, Tobias Czauderna authored at least 44 papers between 2010 and 2023.

Collaborative distances:

• Dijkstra number of four.
• Erdős number of four.

2023

Human-centred feasibility restoration in practice.

Ilankaikone Senthooran, Matthias Klapperstück, Gleb Belov, Tobias Czauderna, Kevin Leo, Mark Wallace, Michael Wybrow, Maria Garcia de la Banda

Constraints An Int. J., 2023

A VR Office Applying Modern Search and Filter Concepts for Knowledge Workers.

Fanny Weidner, Laurenz Bischoff, Johannes Bätz, Robin Schöppach, Peter Meineke, Kevin Kambach, Jannick Mitsch, Andreas Motuzov, Martin Mieth, Andreas Schulz, Melissa Weidlich-Rau, Christian Roschke, Matthias Vodel, Alexander Thomas Kühn, Tobias Czauderna, Daniel Müssig, Manuel Heinzig, Jörg Lässig, Marc Ritter

Proceedings of the Virtual, Augmented and Mixed Reality, 2023

2022

Design considerations for representing systems biology information with the Systems Biology Graphical Notation.

Falk Schreiber, Tobias Czauderna

J. Integr. Bioinform., 2022

Towards a hybrid user interface for the visual exploration of large biomolecular networks using virtual reality.

Michael Aichem, Karsten Klein, Tobias Czauderna, Dimitar Garkov, Jinxin Zhao, Jian Li, Falk Schreiber

J. Integr. Bioinform., 2022

Tangible Globes for Data Visualisation in Augmented Reality.

Kadek Ananta Satriadi, Jim Smiley, Barrett Ens, Maxime Cordeil, Tobias Czauderna, Benjamin Lee, Ying Yang, Tim Dwyer, Bernhard Jenny

Proceedings of the CHI '22: CHI Conference on Human Factors in Computing Systems, New Orleans, LA, USA, 29 April 2022, 2022

2021

Visual exploration of large metabolic models.

Michael Aichem, Tobias Czauderna, Yan Zhu, Jinxin Zhao, Matthias Klapperstück, Karsten Klein, Jian Li, Falk Schreiber

Bioinform., 2021

Human-Centred Feasibility Restoration.

Ilankaikone Senthooran, Matthias Klapperstück, Gleb Belov, Tobias Czauderna, Kevin Leo, Mark Wallace, Michael Wybrow, Maria Garcia de la Banda

Proceedings of the 27th International Conference on Principles and Practice of Constraint Programming, 2021

Quantitative Data Visualisation on Virtual Globes.

Kadek Ananta Satriadi, Barrett Ens, Tobias Czauderna, Maxime Cordeil, Bernhard Jenny

Proceedings of the CHI '21: CHI Conference on Human Factors in Computing Systems, 2021

2020

The Data Visualisation and Immersive Analytics Research Lab at Monash University.

Tim Dwyer, Maxime Cordeil, Tobias Czauderna, Pari Delir Haghighi, Barrett Ens, Sarah Goodwin, Bernhard Jenny, Kim Marriott, Michael Wybrow

Vis. Informatics, 2020

Streamline pair selection for comparative flow field visualization.

Shoko Sawada, Takayuki Itoh, Takashi Misaka, Shigeru Obayashi, Tobias Czauderna, Kingsley Stephens

Vis. Comput. Ind. Biomed. Art, 2020

OntoPlot: A Novel Visualisation for Non-hierarchical Associations in Large Ontologies.

Ying Yang, Michael Wybrow, Yuan-Fang Li, Tobias Czauderna, Yongqun He

IEEE Trans. Vis. Comput. Graph., 2020

Maps Around Me: 3D Multiview Layouts in Immersive Spaces.

Kadek Ananta Satriadi, Barrett Ens, Maxime Cordeil, Tobias Czauderna, Bernhard Jenny

Proc. ACM Hum. Comput. Interact., 2020

Specifications of standards in systems and synthetic biology: status and developments in 2020.

Falk Schreiber, Björn Sommer, Tobias Czauderna, Martin Golebiewski, Thomas E. Gorochowski, Michael Hucka, Sarah M. Keating, Matthias König, Chris J. Myers, David P. Nickerson, Dagmar Waltemath

J. Integr. Bioinform., 2020

Systems biology graphical notation markup language (SBGNML) version 0.3.

Frank T. Bergmann, Tobias Czauderna, Ugur Dogrusoz, Adrien Rougny, Andreas Dräger, Vasundra Touré, Alexander Mazein, Michael L. Blinov, Augustin Luna

J. Integr. Bioinform., 2020

2019

VR system for spatio-temporal visualization of tweet data and support of map exploration.

Kaya Okada, Mitsuo Yoshida, Takayuki Itoh, Tobias Czauderna, Kingsley Stephens

Multim. Tools Appl., 2019

Systems Biology Graphical Notation: Process Description language Level 1 Version 2.0.

Adrien Rougny, Vasundra Touré, Stuart L. Moodie, Irina Balaur, Tobias Czauderna, Hanna Borlinghaus, Ugur Dogrusoz, Alexander Mazein, Andreas Dräger, Michael L. Blinov, Alice Villéger, Robin Haw, Emek Demir, Huaiyu Mi, Anatoly A. Sorokin, Falk Schreiber, Augustin Luna

J. Integr. Bioinform., 2019

Augmented Reality Map Navigation with Freehand Gestures.

Kadek Ananta Satriadi, Barrett Ens, Maxime Cordeil, Bernhard Jenny, Tobias Czauderna, Wesley Willett

Proceedings of the IEEE Conference on Virtual Reality and 3D User Interfaces, 2019

Viewpoint Selection for Shape Comparison of Mode Water Regions in a VR Space.

Midori Yano, Takayuki Itoh, Yuusuke Tanaka, Daisuke Matsuoka, Fumiaki Araki, Tobias Czauderna, Kingsley Stephens

Proceedings of the 23rd International Conference on Information Visualisation, 2019

2018

Immersive Analytics Applications in Life and Health Sciences.

Tobias Czauderna, Jason Haga, Jinman Kim, Matthias Klapperstück, Karsten Klein, Torsten W. Kuhlen, Steffen Oeltze-Jafra, Björn Sommer, Falk Schreiber

Proceedings of the Immersive Analytics, 2018

ContextuWall: Multi-site collaboration using display walls.

Matthias Klapperstück, Tobias Czauderna, Cagatay Goncu, Jaroslaw Glowacki, Tim Dwyer, Falk Schreiber, Kim Marriott

J. Vis. Lang. Comput., 2018

VR System for Spatio-Temporal Visualization of Tweet Data.

Kaya Okada, Mitsuo Yoshida, Takayuki Itoh, Tobias Czauderna, Kingsley Stephens

Proceedings of the 22nd International Conference Information Visualisation, 2018

Spatio-Temporal Visualization of Tweet Data around Tokyo Disneyland Using VR.

Kaya Okada, Mitsuo Yoshida, Takayuki Itoh, Tobias Czauderna, Kingsley Stephens

Proceedings of the 23rd International Conference on Intelligent User Interfaces Companion, 2018

Process Plant Layout Optimization: Equipment Allocation.

Gleb Belov, Tobias Czauderna, Maria Garcia de la Banda, Matthias Klapperstück, Ilankaikone Senthooran, Mitch Smith, Michael Wybrow, Mark Wallace

Proceedings of the Principles and Practice of Constraint Programming, 2018

2017

Streamline Selection for Comparative Visualization of 3D Fluid Simulation Result.

Shoko Sawada, Takayuki Itoh, Takashi Misaka, Shigeru Obayashi, Tobias Czauderna, Kingsley Stephens

Proceedings of the 21st International Conference Information Visualisation, 2017

3D-Stereoscopic Immersive Analytics Projects at Monash University and University of Konstanz.

Björn Sommer, David G. Barnes, Sarah E. Boyd, Tom Chandler, Maxime Cordeil, Tobias Czauderna, Matthias Klapperstück, Karsten Klein, Toàn D. Nguyên, Hieu T. Nim, Kingsley Stephens, Dany Vohl, Stephen Jia Wang, Elliott Wilson, Yan Zhu, Jian Li, Jon McCormack, Kim Marriott, Falk Schreiber

Proceedings of the Stereoscopic Displays and Applications XXVIII, Burlingame, CA, USA, January 29, 2017

An Optimization Model for 3D Pipe Routing with Flexibility Constraints.

Gleb Belov, Tobias Czauderna, Amel Dzaferovic, Maria Garcia de la Banda, Michael Wybrow, Mark Wallace

Proceedings of the Principles and Practice of Constraint Programming, 2017

Immersive Isosurface Visualisation for Engineering Datasets.

Kadek Ananta Satriadi, Kingsley Stephens, Callum Atkinson, Maxime Cordeil, Tobias Czauderna

Proceedings of the 2017 International Symposium on Big Data Visual Analytics, 2017

2016

Toward Community Standards and Software for Whole-Cell Modeling.

Dagmar Waltemath, Jonathan R. Karr, Frank T. Bergmann, Vijayalakshmi Chelliah, Michael Hucka, Marcus Krantz, Wolfram Liebermeister, Pedro Mendes, Chris J. Myers, Pinar Pir, Begum Alaybeyoglu, Naveen K. Aranganathan, Kambiz Baghalian, Arne T. Bittig, Paulo E. Pinto Burke, Matteo Cantarelli, Yin Hoon Chew, Rafael S. Costa, Joseph Cursons, Tobias Czauderna, Arthur P. Goldberg, Harold F. Gómez, Jens Hahn, Tuure Hameri, Daniel F. Hernandez Gardiol, Denis Kazakiewicz, Ilya Kiselev, Vincent Knight-Schrijver, Christian Knüpfer, Matthias König, Daewon Lee, Audald Lloret-Villas, Nikita Mandrik, J. Kyle Medley, Bertrand Moreau, Hojjat Naderi-Meshkin, Sucheendra K. Palaniappan, Daniel Priego-Espinosa, Martin Scharm, Mahesh Sharma, Kieran Smallbone, Natalie J. Stanford, Je-Hoon Song, Tom Theile, Milenko Tokic, Namrata Tomar, Vasundra Touré, Jannis Uhlendorf, Thawfeek M. Varusai, Leandro H. Watanabe, Florian Wendland, Markus Wolfien, James T. Yurkovich, Yan Zhu, Argyris Zardilis, Anna Zhukova, Falk Schreiber

IEEE Trans. Biomed. Eng., 2016

Stereoscopic Space Map - Semi-immersive Configuration of 3D-stereoscopic Tours in Multi-display Environments.

Björn Sommer, Andreas Hamacher, Owen Kaluza, Tobias Czauderna, Matthias Klapperstück, Niklas Biere, Marco Civico, Bruce H. Thomas, David G. Barnes, Falk Schreiber

Proceedings of the Stereoscopic Displays and Applications XXVII, 2016

ContextuWall: Peer Collaboration Using (Large) Displays.

Matthias Klapperstück, Tobias Czauderna, Cagatay Goncu, Jaroslaw Glowacki, Tim Dwyer, Falk Schreiber, Kim Marriott

Proceedings of the 2016 Big Data Visual Analytics, 2016

2015

Methoden und Algorithmen für die Systems Biology Graphical Notation.

Tobias Czauderna

PhD thesis, 2015

Systems Biology Graphical Notation: Entity Relationship language Level 1 Version 2.

Anatoly A. Sorokin, Nicolas Le Novère, Augustin Luna, Tobias Czauderna, Emek Demir, Robin Haw, Huaiyu Mi, Stuart L. Moodie, Falk Schreiber, Alice Villéger

J. Integr. Bioinform., 2015

Systems Biology Graphical Notation: Activity Flow language Level 1 Version 1.2 .

Huaiyu Mi, Falk Schreiber, Stuart L. Moodie, Tobias Czauderna, Emek Demir, Robin Haw, Augustin Luna, Nicolas Le Novère, Anatoly A. Sorokin, Alice Villéger

J. Integr. Bioinform., 2015

Immersive Analytics.

Tom Chandler, Maxime Cordeil, Tobias Czauderna, Tim Dwyer, Jaroslaw Glowacki, Cagatay Goncu, Matthias Klapperstück, Karsten Klein, Kim Marriott, Falk Schreiber, Elliott Wilson

Proceedings of the Big Data Visual Analytics, 2015

2013

Translation of SBGN maps: Process Description to Activity Flow.

Torsten Vogt, Tobias Czauderna, Falk Schreiber

BMC Syst. Biol., 2013

Path2Models: large-scale generation of computational models from biochemical pathway maps.

Finja Büchel, Nicolas Rodriguez, Neil Swainston, Clemens Wrzodek, Tobias Czauderna, Roland Keller, Florian Mittag, Michael Schubert, Mihai Glont, Martin Golebiewski, Martijn P. van Iersel, Sarah M. Keating, Matthias Rall, Michael Wybrow, Henning Hermjakob, Michael Hucka, Douglas B. Kell, Wolfgang Müller, Pedro Mendes, Andreas Zell, Claudine Chaouiya, Julio Saez-Rodriguez, Falk Schreiber, Camille Laibe, Andreas Dräger, Nicolas Le Novère

BMC Syst. Biol., 2013

Conversion of KEGG metabolic pathways to SBGN maps including automatic layout.

Tobias Czauderna, Michael Wybrow, Kim Marriott, Falk Schreiber

BMC Bioinform., 2013

OPTIMAS-DW, MetaCrop and VANTED: A Case Study for Data Integration, Curation and Visualisation in Life Sciences.

Christian Colmsee, Tobias Czauderna, Eva Grafahrend-Belau, Anja Hartmann, Matthias Lange, Martin Mascher, Stephan Weise, Uwe Scholz, Falk Schreiber

Proceedings of the 43. Jahrestagung der Gesellschaft für Informatik, 2013

2012

MetaCrop 2.0: managing and exploring information about crop plant metabolism.

Falk Schreiber, Christian Colmsee, Tobias Czauderna, Eva Grafahrend-Belau, Anja Hartmann, Astrid Junker, Björn H. Junker, Matthias Klapperstück, Uwe Scholz, Stephan Weise

Nucleic Acids Res., 2012

VANTED v2: a framework for systems biology applications.

Hendrik Rohn, Astrid Junker, Anja Hartmann, Eva Grafahrend-Belau, Hendrik Treutler, Matthias Klapperstück, Tobias Czauderna, Christian Klukas, Falk Schreiber

BMC Syst. Biol., 2012

Software support for SBGN maps: SBGN-ML and LibSBGN.

Martijn P. van Iersel, Alice Villéger, Tobias Czauderna, Sarah E. Boyd, Frank T. Bergmann, Augustin Luna, Emek Demir, Anatoly A. Sorokin, Ugur Dogrusöz, Yukiko Matsuoka, Akira Funahashi, Mirit I. Aladjem, Huaiyu Mi, Stuart L. Moodie, Hiroaki Kitano, Nicolas Le Novère, Falk Schreiber

Bioinform., 2012

2011

HTPheno: An Image Analysis Pipeline for High-Throughput Plant Phenotyping.

Anja Hartmann, Tobias Czauderna, Roberto Hoffmann, Nils Stein, Falk Schreiber

BMC Bioinform., 2011

2010

Novel Developments of the MetaCrop Information System for Facilitating Systems Biological Approaches.

Klaus Hippe, Christian Colmsee, Tobias Czauderna, Eva Grafahrend-Belau, Björn H. Junker, Christian Klukas, Uwe Scholz, Falk Schreiber, Stephan Weise

J. Integr. Bioinform., 2010

Editing, validating and translating of SBGN maps.

Tobias Czauderna, Christian Klukas, Falk Schreiber

Bioinform., 2010